RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 TIMM21Q9BVV7 248 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 DPH3P1Q9H4G8 78 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 PRO1854Q9UHT4 67 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 DOCK11Q5JSL3 2073 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 VCYO14598 125 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 TAX1BP3O14907 124 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 LINC00205P59089 165 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 UTF1Q5T230 341 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 FAM104BQ5XKR9 115 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 TRGV9Q99603 122 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 SPXQ9BT56 116 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 RPUSD1Q9UJJ7 312 aaKnown RBP8.5□□□□□ -1.05
VCL-201ENST00000211998 WNT2P09544 360 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 DNAJC30Q96LL9 226 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 TRAV13-1A0A0B4J241 112 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.49□□□□□ -1.05
VCL-201ENST00000211998 PRSS29PA6NIE9 313 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 DUSP14O95147 198 aaKnown RBP8.49□□□□□ -1.05
VCL-201ENST00000211998 CT83Q5H943 113 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 C8orf86Q6ZUL3 223 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 MTCL1Q9Y4B5 1905 aaKnown RBP8.49□□□□□ -1.05
VCL-201ENST00000211998 FNDC10F2Z333 226 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 NEGR1Q7Z3B1 354 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 C14orf178Q8N769 122 aaPredicted RBP8.49□□□□□ -1.05
VCL-201ENST00000211998 MLANAQ16655 118 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 ZNF876PQ49A33 203 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 CRIPAKQ8N1N5 446 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 ZC2HC1AQ96GY0 325 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 PYGO2Q9BRQ0 406 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 IGHV1-18A0A0C4DH31 117 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 SOCS3O14543 225 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 Q6ZS49 121 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 LINC01587Q99440 93 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 ANAPC10Q9UM13 185 aa8.49□□□□□ -1.05
VCL-201ENST00000211998 LEPROTO15243 131 aa8.48□□□□□ -1.05
VCL-201ENST00000211998 CARD19Q96LW7 228 aa8.48□□□□□ -1.05
VCL-201ENST00000211998 PRADC1Q9BSG0 188 aa8.48□□□□□ -1.05
VCL-201ENST00000211998 SIGLEC8Q9NYZ4 499 aa8.48□□□□□ -1.05
VCL-201ENST00000211998 TRBV6-6A0A0A6YYG2 114 aa8.48□□□□□ -1.05
VCL-201ENST00000211998 PSPNO60542 156 aa8.48□□□□□ -1.05
VCL-201ENST00000211998 CD59P13987 128 aa8.48□□□□□ -1.05
VCL-201ENST00000211998 HERV-K104P63124 156 aa8.48□□□□□ -1.05
VCL-201ENST00000211998 WFDC2Q14508 124 aa8.48□□□□□ -1.05
VCL-201ENST00000211998 FAM231DQ6ZW35 169 aa8.48□□□□□ -1.05
VCL-201ENST00000211998 SPRR3Q9UBC9 169 aa8.48□□□□□ -1.05
VCL-201ENST00000211998 DKK2Q9UBU2 259 aa8.48□□□□□ -1.05
VCL-201ENST00000211998 J3KT08 172 aa8.48□□□□□ -1.05
VCL-201ENST00000211998 PRB3Q04118 309 aaPredicted RBP8.48□□□□□ -1.05
VCL-201ENST00000211998 POU2AF1Q16633 256 aa8.48□□□□□ -1.05
VCL-201ENST00000211998 PCP2Q8IVA1 136 aa8.48□□□□□ -1.05
VCL-201ENST00000211998 MRPL35Q9NZE8 188 aaKnown RBP8.48□□□□□ -1.05
VCL-201ENST00000211998 ASPHD1Q5U4P2 390 aa8.47□□□□□ -1.05
VCL-201ENST00000211998 HLA-DRB4P13762 266 aa8.47□□□□□ -1.05
VCL-201ENST00000211998 Q8N8P6 123 aa8.47□□□□□ -1.05
VCL-201ENST00000211998 TMEM167AQ8TBQ9 72 aa8.47□□□□□ -1.05
VCL-201ENST00000211998 HLA-DRB4X5D2U9 266 aa8.47□□□□□ -1.05
VCL-201ENST00000211998 FREM3P0C091 2139 aa8.47□□□□□ -1.05
VCL-201ENST00000211998 IGLL5B9A064 214 aa8.47□□□□□ -1.05
VCL-201ENST00000211998 MRPL51Q4U2R6 128 aaKnown RBP8.47□□□□□ -1.05
VCL-201ENST00000211998 RASL10AQ92737 203 aa8.47□□□□□ -1.05
VCL-201ENST00000211998 APC2O95996 2303 aa8.47□□□□□ -1.05
VCL-201ENST00000211998 K7EN84 100 aa8.47□□□□□ -1.05
VCL-201ENST00000211998 HLA-DMBP28068 263 aa8.47□□□□□ -1.05
VCL-201ENST00000211998 FOXI2Q6ZQN5 318 aa8.47□□□□□ -1.05
VCL-201ENST00000211998 NPYP01303 97 aa8.46□□□□□ -1.05
VCL-201ENST00000211998 IL15RAQ13261 267 aa8.46□□□□□ -1.05
VCL-201ENST00000211998 FHL1Q13642 323 aa8.46□□□□□ -1.05
VCL-201ENST00000211998 C20orf204Q6ZNR8 217 aa8.46□□□□□ -1.05
VCL-201ENST00000211998 METRNQ9UJH8 293 aa8.46□□□□□ -1.05
VCL-201ENST00000211998 DOCK4Q8N1I0 1966 aa8.46□□□□□ -1.05
VCL-201ENST00000211998 TRGV2A0A075B6R0 118 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 PRSS46E5RG02 174 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 MALP21145 153 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 RBM3P98179 157 aaKnown RBP8.46□□□□□ -1.06
VCL-201ENST00000211998 LYPD1Q8N2G4 141 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 DOCK3Q8IZD9 2030 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 SIPA1L1O43166 1804 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 FAM186AA6NE01 2351 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 ADARB2-AS1A8MUL3 147 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 IGHV3-11P01762 117 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 ZNF415Q09FC8 603 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 KLF5Q13887 457 aaPredicted RBP8.46□□□□□ -1.06
VCL-201ENST00000211998 C3orf36Q3SXR2 165 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 IGFL4Q6B9Z1 124 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 STHQ8IWL8 128 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 ZNF747Q9BV97 191 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 PDCD11Q14690 1871 aaKnown RBP8.46□□□□□ -1.06
VCL-201ENST00000211998 OVOL1O14753 267 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 EFNA2O43921 213 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 IGHV1-46P01743 117 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 MRPL23Q16540 153 aaKnown RBP8.46□□□□□ -1.06
VCL-201ENST00000211998 C3orf56Q8N813 242 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 SCRT2Q9NQ03 307 aa8.46□□□□□ -1.06
VCL-201ENST00000211998 XIRP1Q702N8 1843 aaKnown RBP8.46□□□□□ -1.06
VCL-201ENST00000211998 RS1O15537 224 aa8.45□□□□□ -1.06
VCL-201ENST00000211998 NDUFS7O75251 213 aa8.45□□□□□ -1.06
VCL-201ENST00000211998 CMC4P56277 68 aaPredicted RBP8.45□□□□□ -1.06
VCL-201ENST00000211998 SYNJ2BPP57105 145 aa8.45□□□□□ -1.06
VCL-201ENST00000211998 C2orf66Q6UXQ4 117 aa8.45□□□□□ -1.06
VCL-201ENST00000211998 JPT2Q9H910 190 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms