RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 ANGP03950 147 aaKnown RBP13.12□□□□□ -0.31
CLN5-208ENST00000636183 COL24A1Q17RW2 1714 aa13.11□□□□□ -0.31
CLN5-208ENST00000636183 ZNF236Q9UL36 1845 aa13.11□□□□□ -0.31
CLN5-208ENST00000636183 IGHV3-38A0A0C4DH36 116 aa13.11□□□□□ -0.31
CLN5-208ENST00000636183 TMEM155Q4W5P6 130 aa13.11□□□□□ -0.31
CLN5-208ENST00000636183 PRIMA1Q86XR5 153 aa13.11□□□□□ -0.31
CLN5-208ENST00000636183 PRSS33Q8NF86 280 aa13.11□□□□□ -0.31
CLN5-208ENST00000636183 DOCK6Q96HP0 2047 aa13.11□□□□□ -0.31
CLN5-208ENST00000636183 TRAV3A0A0B4J244 114 aa13.11□□□□□ -0.31
CLN5-208ENST00000636183 TET1Q8NFU7 2136 aa13.11□□□□□ -0.31
CLN5-208ENST00000636183 ZNF98A6NK75 572 aa13.11□□□□□ -0.31
CLN5-208ENST00000636183 IGKV1-5P01602 117 aa13.11□□□□□ -0.31
CLN5-208ENST00000636183 GGTLC1Q9BX51 225 aa13.11□□□□□ -0.31
CLN5-208ENST00000636183 SIGLEC9Q9Y336 463 aa13.11□□□□□ -0.31
CLN5-208ENST00000636183 KLF12Q9Y4X4 402 aa13.11□□□□□ -0.31
CLN5-208ENST00000636183 TRBV25-1A0A075B6N4 114 aa13.1□□□□□ -0.31
CLN5-208ENST00000636183 LEPROTO15243 131 aa13.1□□□□□ -0.31
CLN5-208ENST00000636183 RBMY1FQ15415 496 aaKnown RBP13.1□□□□□ -0.31
CLN5-208ENST00000636183 SPXQ9BT56 116 aa13.1□□□□□ -0.31
CLN5-208ENST00000636183 ARFGEF1Q9Y6D6 1849 aa13.1□□□□□ -0.31
CLN5-208ENST00000636183 SH2D1AO60880 128 aa13.1□□□□□ -0.31
CLN5-208ENST00000636183 ATXN8Q156A1 80 aa13.1□□□□□ -0.31
CLN5-208ENST00000636183 C18orf12Q96KH6 178 aa13.1□□□□□ -0.31
CLN5-208ENST00000636183 IGLV3-32A0A0A0MS00 114 aa13.1□□□□□ -0.31
CLN5-208ENST00000636183 TRAV12-2A0A075B6T6 113 aa13.1□□□□□ -0.31
CLN5-208ENST00000636183 TRAV8-4A0A0B4J246 113 aa13.1□□□□□ -0.31
CLN5-208ENST00000636183 CEP250Q9BV73 2442 aa13.09□□□□□ -0.31
CLN5-208ENST00000636183 TUBGCP6Q96RT7 1819 aa13.09□□□□□ -0.31
CLN5-208ENST00000636183 G3V318 75 aa13.09□□□□□ -0.31
CLN5-208ENST00000636183 CCL20P78556 96 aa13.09□□□□□ -0.31
CLN5-208ENST00000636183 LYZL1Q6UWQ5 148 aa13.09□□□□□ -0.31
CLN5-208ENST00000636183 ZNF562Q6V9R5 426 aa13.09□□□□□ -0.31
CLN5-208ENST00000636183 RBM38Q9H0Z9 239 aaKnown RBP13.09□□□□□ -0.31
CLN5-208ENST00000636183 ZNF319Q9P2F9 582 aa13.09□□□□□ -0.31
CLN5-208ENST00000636183 COL5A3P25940 1745 aaPredicted RBP13.09□□□□□ -0.31
CLN5-208ENST00000636183 GSN-AS1Q9NRJ2 163 aa13.09□□□□□ -0.31
CLN5-208ENST00000636183 ESDP10768 282 aa13.09□□□□□ -0.31
CLN5-208ENST00000636183 TMEM158Q8WZ71 300 aa13.09□□□□□ -0.31
CLN5-208ENST00000636183 IGKV1-9A0A0C4DH69 117 aa13.08□□□□□ -0.31
CLN5-208ENST00000636183 VCYO14598 125 aa13.08□□□□□ -0.31
CLN5-208ENST00000636183 PRTN3P24158 256 aa13.08□□□□□ -0.31
CLN5-208ENST00000636183 Q5BKY6 102 aa13.08□□□□□ -0.31
CLN5-208ENST00000636183 SPATA31B1PQ5VZV4 182 aa13.08□□□□□ -0.31
CLN5-208ENST00000636183 ZNRD1Q9P1U0 126 aa13.08□□□□□ -0.31
CLN5-208ENST00000636183 CNOT1A5YKK6 2376 aaKnown RBP13.08□□□□□ -0.32
CLN5-208ENST00000636183 CACNA1IQ9P0X4 2223 aa13.08□□□□□ -0.32
CLN5-208ENST00000636183 PPBPP02775 128 aa13.08□□□□□ -0.32
CLN5-208ENST00000636183 NMBP08949 121 aa13.08□□□□□ -0.32
CLN5-208ENST00000636183 RPL18AQ02543 176 aaKnown RBP13.08□□□□□ -0.32
CLN5-208ENST00000636183 ERG28Q9UKR5 140 aa13.08□□□□□ -0.32
CLN5-208ENST00000636183 IGHV2-70DA0A0C4DH43 119 aa13.08□□□□□ -0.32
CLN5-208ENST00000636183 DEFB105AQ8NG35 78 aa13.08□□□□□ -0.32
CLN5-208ENST00000636183 FLVCR1-AS1Q8TAF5 88 aa13.08□□□□□ -0.32
CLN5-208ENST00000636183 RNF5Q99942 180 aa13.08□□□□□ -0.32
CLN5-208ENST00000636183 H3BMM0 161 aa13.08□□□□□ -0.32
CLN5-208ENST00000636183 J3QLI3 93 aa13.08□□□□□ -0.32
CLN5-208ENST00000636183 UBE2WQ96B02 151 aa13.08□□□□□ -0.32
CLN5-208ENST00000636183 TIMM17AQ99595 171 aa13.08□□□□□ -0.32
CLN5-208ENST00000636183 DEFB113Q30KQ7 82 aa13.08□□□□□ -0.32
CLN5-208ENST00000636183 SCN5AQ14524 2016 aa13.08□□□□□ -0.32
CLN5-208ENST00000636183 ADMP35318 185 aa13.07□□□□□ -0.32
CLN5-208ENST00000636183 PSG3Q16557 428 aa13.07□□□□□ -0.32
CLN5-208ENST00000636183 PMVKQ15126 192 aa13.07□□□□□ -0.32
CLN5-208ENST00000636183 DMRTC2Q8IXT2 367 aaPredicted RBP13.07□□□□□ -0.32
CLN5-208ENST00000636183 SCN10AQ9Y5Y9 1956 aa13.07□□□□□ -0.32
CLN5-208ENST00000636183 PRSS29PA6NIE9 313 aa13.07□□□□□ -0.32
CLN5-208ENST00000636183 LRRC37AA6NMS7 1700 aa13.07□□□□□ -0.32
CLN5-208ENST00000636183 FANCMQ8IYD8 2048 aa13.07□□□□□ -0.32
CLN5-208ENST00000636183 D6R8Y8 96 aa13.07□□□□□ -0.32
CLN5-208ENST00000636183 SUPT4H1P63272 117 aaKnown RBP13.07□□□□□ -0.32
CLN5-208ENST00000636183 FAM90A2PQ658T7 463 aa13.07□□□□□ -0.32
CLN5-208ENST00000636183 TSSC4Q9Y5U2 329 aaPredicted RBP13.07□□□□□ -0.32
CLN5-208ENST00000636183 TMEM238C9JI98 176 aa13.07□□□□□ -0.32
CLN5-208ENST00000636183 F8W735 103 aaPredicted RBP13.07□□□□□ -0.32
CLN5-208ENST00000636183 NRGNQ92686 78 aa13.07□□□□□ -0.32
CLN5-208ENST00000636183 IGKV1-39P01597 117 aa13.06□□□□□ -0.32
CLN5-208ENST00000636183 IGKV1D-39P04432 117 aa13.06□□□□□ -0.32
CLN5-208ENST00000636183 C4orf48Q5BLP8 95 aa13.06□□□□□ -0.32
CLN5-208ENST00000636183 LINC00114Q6XXX2 140 aa13.06□□□□□ -0.32
CLN5-208ENST00000636183 FBLIM1Q8WUP2 373 aa13.06□□□□□ -0.32
CLN5-208ENST00000636183 A8MXK9 166 aa13.06□□□□□ -0.32
CLN5-208ENST00000636183 H3BUT2 72 aa13.06□□□□□ -0.32
CLN5-208ENST00000636183 TNFRSF6BO95407 300 aa13.06□□□□□ -0.32
CLN5-208ENST00000636183 LINC00205P59089 165 aa13.06□□□□□ -0.32
CLN5-208ENST00000636183 SEC11AP67812 179 aa13.06□□□□□ -0.32
CLN5-208ENST00000636183 Q6ZQT7 251 aa13.06□□□□□ -0.32
CLN5-208ENST00000636183 SMIM2Q9BVW6 85 aa13.06□□□□□ -0.32
CLN5-208ENST00000636183 SDK2Q58EX2 2172 aa13.06□□□□□ -0.32
CLN5-208ENST00000636183 LGALS1P09382 135 aaKnown RBP13.05□□□□□ -0.32
CLN5-208ENST00000636183 CD200R1LQ6Q8B3 271 aa13.05□□□□□ -0.32
CLN5-208ENST00000636183 TRPM7Q96QT4 1865 aa13.05□□□□□ -0.32
CLN5-208ENST00000636183 C1QL4Q86Z23 238 aa13.05□□□□□ -0.32
CLN5-208ENST00000636183 CSRP3P50461 194 aa13.05□□□□□ -0.32
CLN5-208ENST00000636183 RPL23P62829 140 aaKnown RBP13.05□□□□□ -0.32
CLN5-208ENST00000636183 YLPM1P49750 1951 aaKnown RBP13.05□□□□□ -0.32
CLN5-208ENST00000636183 A0A1W2PRE2 83 aa13.05□□□□□ -0.32
CLN5-208ENST00000636183 AMBPP02760 352 aa13.05□□□□□ -0.32
CLN5-208ENST00000636183 CCL18P55774 89 aa13.05□□□□□ -0.32
CLN5-208ENST00000636183 ZNRF2Q8NHG8 242 aa13.05□□□□□ -0.32
CLN5-208ENST00000636183 RBBP6Q7Z6E9 1792 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms