RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 OR10K1Q8NGX5 313 aa-0.3□□□□□ -2.46
SRP54-214ENST00000630962 Q8TAT8 98 aa-0.3□□□□□ -2.46
SRP54-214ENST00000630962 MUCL1Q96DR8 90 aa-0.3□□□□□ -2.46
SRP54-214ENST00000630962 CCL19Q99731 98 aa-0.3□□□□□ -2.46
SRP54-214ENST00000630962 SLC25A21Q9BQT8 299 aaPredicted RBP-0.3□□□□□ -2.46
SRP54-214ENST00000630962 GGACTQ9BVM4 153 aa-0.3□□□□□ -2.46
SRP54-214ENST00000630962 UCK1Q9HA47 277 aa-0.3□□□□□ -2.46
SRP54-214ENST00000630962 ARHGEF11O15085 1522 aa-0.3□□□□□ -2.46
SRP54-214ENST00000630962 BCORL1Q5H9F3 1711 aa-0.3□□□□□ -2.46
SRP54-214ENST00000630962 NCOA1Q15788 1441 aa-0.3□□□□□ -2.46
SRP54-214ENST00000630962 OBSL1O75147 1896 aa-0.31□□□□□ -2.46
SRP54-214ENST00000630962 ANK2Q01484 3957 aa-0.31□□□□□ -2.46
SRP54-214ENST00000630962 TTC28Q96AY4 2481 aa-0.31□□□□□ -2.46
SRP54-214ENST00000630962 CACNA1CQ13936 2221 aa-0.31□□□□□ -2.46
SRP54-214ENST00000630962 SCN8AQ9UQD0 1980 aa-0.31□□□□□ -2.46
SRP54-214ENST00000630962 hADV38S2A0JD32 116 aa-0.31□□□□□ -2.46
SRP54-214ENST00000630962 CDK6Q00534 326 aa-0.31□□□□□ -2.46
SRP54-214ENST00000630962 OCIAD2Q56VL3 154 aa-0.31□□□□□ -2.46
SRP54-214ENST00000630962 Q5BKY6 102 aa-0.31□□□□□ -2.46
SRP54-214ENST00000630962 C10orf99Q6UWK7 81 aa-0.31□□□□□ -2.46
SRP54-214ENST00000630962 LYG2Q86SG7 212 aa-0.31□□□□□ -2.46
SRP54-214ENST00000630962 C8orf76Q96K31 380 aa-0.31□□□□□ -2.46
SRP54-214ENST00000630962 PTPRFP10586 1907 aa-0.31□□□□□ -2.46
SRP54-214ENST00000630962 HMCN2Q8NDA2 5059 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 FAM236DA0A1B0GTK5 79 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 CLDN24A6NM45 220 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 M0R233 179 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 NDUFB3O43676 98 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 OR7C1O76099 320 aaPredicted RBP-0.32□□□□□ -2.46
SRP54-214ENST00000630962 LY6G6CO95867 125 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 FAM236CP0DP71 79 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 VBP1P61758 197 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 BCL2L15Q5TBC7 163 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 PDZD9Q8IXQ8 264 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 CLDN22Q8N7P3 220 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 SLC25A40Q8TBP6 338 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 RAB37Q96AX2 223 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 CFAP53Q96M91 514 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 CCDC94Q9BW85 323 aaPredicted RBP-0.32□□□□□ -2.46
SRP54-214ENST00000630962 TMEM126AQ9H061 195 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 FMN1Q68DA7 1419 aa-0.32□□□□□ -2.46
SRP54-214ENST00000630962 B4DSR2 109 aa-0.33□□□□□ -2.46
SRP54-214ENST00000630962 FREM3P0C091 2139 aa-0.33□□□□□ -2.46
SRP54-214ENST00000630962 OR10J4P0C629 311 aa-0.33□□□□□ -2.46
SRP54-214ENST00000630962 RANP62826 216 aaKnown RBP-0.33□□□□□ -2.46
SRP54-214ENST00000630962 C1orf134Q5TEV5 83 aa-0.33□□□□□ -2.46
SRP54-214ENST00000630962 STAG3L4Q8TBR4 150 aa-0.33□□□□□ -2.46
SRP54-214ENST00000630962 TRIM4Q9C037 500 aa-0.33□□□□□ -2.46
SRP54-214ENST00000630962 BOKQ9UMX3 212 aaPredicted RBP-0.33□□□□□ -2.46
SRP54-214ENST00000630962 MGAMO43451 1857 aa-0.33□□□□□ -2.46
SRP54-214ENST00000630962 ODAMA1E959 279 aa-0.34□□□□□ -2.46
SRP54-214ENST00000630962 CETN3O15182 167 aa-0.34□□□□□ -2.46
SRP54-214ENST00000630962 GGCTO75223 188 aaKnown RBP-0.34□□□□□ -2.46
SRP54-214ENST00000630962 CNIH1O95406 144 aa-0.34□□□□□ -2.46
SRP54-214ENST00000630962 SRIP30626 198 aa-0.34□□□□□ -2.46
SRP54-214ENST00000630962 HIST1H3AP68431 136 aa-0.34□□□□□ -2.46
SRP54-214ENST00000630962 H3F3AP84243 136 aa-0.34□□□□□ -2.46
SRP54-214ENST00000630962 KRTAP6-1Q3LI64 71 aa-0.34□□□□□ -2.46
SRP54-214ENST00000630962 CASC2Q6XLA1 102 aa-0.34□□□□□ -2.46
SRP54-214ENST00000630962 GLTPQ9NZD2 209 aa-0.34□□□□□ -2.46
SRP54-214ENST00000630962 RFX7Q2KHR2 1363 aa-0.34□□□□□ -2.46
SRP54-214ENST00000630962 TRAV27A0A087WT01 109 aa-0.35□□□□□ -2.47
SRP54-214ENST00000630962 FAM159BA6NKW6 160 aa-0.35□□□□□ -2.47
SRP54-214ENST00000630962 CST8O60676 142 aa-0.35□□□□□ -2.47
SRP54-214ENST00000630962 RPL37AP61513 92 aaKnown RBP-0.35□□□□□ -2.47
SRP54-214ENST00000630962 EIF3IQ13347 325 aaKnown RBP-0.35□□□□□ -2.47
SRP54-214ENST00000630962 EDDM3AQ14507 147 aa-0.35□□□□□ -2.47
SRP54-214ENST00000630962 RRN3P1Q2M238 152 aa-0.35□□□□□ -2.47
SRP54-214ENST00000630962 LINC00299Q6ZSB3 139 aa-0.35□□□□□ -2.47
SRP54-214ENST00000630962 OR51A2Q8NGJ7 313 aa-0.35□□□□□ -2.47
SRP54-214ENST00000630962 POP5Q969H6 163 aaKnown RBP-0.35□□□□□ -2.47
SRP54-214ENST00000630962 RMND5BQ96G75 393 aaPredicted RBP-0.35□□□□□ -2.47
SRP54-214ENST00000630962 LIMD2Q9BT23 127 aa-0.35□□□□□ -2.47
SRP54-214ENST00000630962 MYLKQ15746 1914 aa-0.35□□□□□ -2.47
SRP54-214ENST00000630962 POLQO75417 2590 aa-0.35□□□□□ -2.47
SRP54-214ENST00000630962 KDM6BO15054 1643 aa-0.35□□□□□ -2.47
SRP54-214ENST00000630962 CACNA1HO95180 2353 aa-0.35□□□□□ -2.47
SRP54-214ENST00000630962 ERBINQ96RT1 1412 aa-0.36□□□□□ -2.47
SRP54-214ENST00000630962 WNK2Q9Y3S1 2297 aa-0.36□□□□□ -2.47
SRP54-214ENST00000630962 A0A096LPI6 279 aa-0.36□□□□□ -2.47
SRP54-214ENST00000630962 PRORSD1PA6NEY8 169 aa-0.36□□□□□ -2.47
SRP54-214ENST00000630962 MYL6P60660 151 aa-0.36□□□□□ -2.47
SRP54-214ENST00000630962 EIF5AL1Q6IS14 154 aaKnown RBP-0.36□□□□□ -2.47
SRP54-214ENST00000630962 S100A7AQ86SG5 101 aa-0.36□□□□□ -2.47
SRP54-214ENST00000630962 TEX37Q96LM6 180 aa-0.36□□□□□ -2.47
SRP54-214ENST00000630962 KIFC1Q9BW19 673 aa-0.36□□□□□ -2.47
SRP54-214ENST00000630962 IMUPQ9GZP8 106 aa-0.36□□□□□ -2.47
SRP54-214ENST00000630962 PROK2Q9HC23 129 aa-0.36□□□□□ -2.47
SRP54-214ENST00000630962 UQCC1Q9NVA1 299 aa-0.36□□□□□ -2.47
SRP54-214ENST00000630962 ARL5AQ9Y689 179 aa-0.36□□□□□ -2.47
SRP54-214ENST00000630962 U3KQA8 63 aa-0.36□□□□□ -2.47
SRP54-214ENST00000630962 ASXL3Q9C0F0 2248 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 MYO5AQ9Y4I1 1855 aaKnown RBP-0.37□□□□□ -2.47
SRP54-214ENST00000630962 TENM4Q6N022 2769 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 ABCA4P78363 2273 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 C9orf170A2RU37 121 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 KPNA3O00505 521 aaPredicted RBP-0.37□□□□□ -2.47
SRP54-214ENST00000630962 PDE6DO43924 150 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 RAB5CP51148 216 aa-0.37□□□□□ -2.47
SRP54-214ENST00000630962 CAV3P56539 151 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms