RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 MRPS10P82664 201 aaKnown RBP10.89□□□□□ -0.67
PDLIM3-213ENST00000629667 FGL1Q08830 312 aa10.89□□□□□ -0.67
PDLIM3-213ENST00000629667 IGFL4Q6B9Z1 124 aa10.89□□□□□ -0.67
PDLIM3-213ENST00000629667 RNF182Q8N6D2 247 aa10.89□□□□□ -0.67
PDLIM3-213ENST00000629667 THAP8Q8NA92 274 aa10.89□□□□□ -0.67
PDLIM3-213ENST00000629667 C17orf77Q96MU5 243 aa10.89□□□□□ -0.67
PDLIM3-213ENST00000629667 GPR82Q96P67 336 aa10.89□□□□□ -0.67
PDLIM3-213ENST00000629667 PRRT1Q99946 306 aa10.89□□□□□ -0.67
PDLIM3-213ENST00000629667 SLC25A39Q9BZJ4 359 aaPredicted RBP10.89□□□□□ -0.67
PDLIM3-213ENST00000629667 TIMM8BQ9Y5J9 83 aaPredicted RBP10.89□□□□□ -0.67
PDLIM3-213ENST00000629667 EPM2AB3EWF7 344 aa10.88□□□□□ -0.67
PDLIM3-213ENST00000629667 AKR1C4P17516 323 aa10.88□□□□□ -0.67
PDLIM3-213ENST00000629667 ORM2P19652 201 aa10.88□□□□□ -0.67
PDLIM3-213ENST00000629667 TAS2R60P59551 318 aa10.88□□□□□ -0.67
PDLIM3-213ENST00000629667 RHOBP62745 196 aa10.88□□□□□ -0.67
PDLIM3-213ENST00000629667 TMEM256Q8N2U0 113 aa10.88□□□□□ -0.67
PDLIM3-213ENST00000629667 ZNF738Q8NE65 137 aa10.88□□□□□ -0.67
PDLIM3-213ENST00000629667 OR51S1Q8NGJ8 323 aa10.88□□□□□ -0.67
PDLIM3-213ENST00000629667 C16orf74Q96GX8 76 aa10.88□□□□□ -0.67
PDLIM3-213ENST00000629667 TMEM147Q9BVK8 224 aa10.88□□□□□ -0.67
PDLIM3-213ENST00000629667 KRTAP1-5Q9BYS1 174 aa10.88□□□□□ -0.67
PDLIM3-213ENST00000629667 PPP1R14DQ9NXH3 145 aa10.88□□□□□ -0.67
PDLIM3-213ENST00000629667 TRAV8-2A0A0B4J237 113 aa10.87□□□□□ -0.67
PDLIM3-213ENST00000629667 BTF3P20290 206 aaKnown RBP10.87□□□□□ -0.67
PDLIM3-213ENST00000629667 OR5I1Q13606 314 aa10.87□□□□□ -0.67
PDLIM3-213ENST00000629667 TMEM144Q7Z5S9 345 aa10.87□□□□□ -0.67
PDLIM3-213ENST00000629667 CLVS1Q8IUQ0 354 aaPredicted RBP10.87□□□□□ -0.67
PDLIM3-213ENST00000629667 BPIFCQ8NFQ6 507 aa10.87□□□□□ -0.67
PDLIM3-213ENST00000629667 GNPNAT1Q96EK6 184 aaPredicted RBP10.87□□□□□ -0.67
PDLIM3-213ENST00000629667 SCGB3A2Q96PL1 93 aa10.87□□□□□ -0.67
PDLIM3-213ENST00000629667 UHRF2Q96PU4 802 aa10.87□□□□□ -0.67
PDLIM3-213ENST00000629667 Q9H3A6 140 aa10.87□□□□□ -0.67
PDLIM3-213ENST00000629667 RGS5O15539 181 aa10.86□□□□□ -0.67
PDLIM3-213ENST00000629667 IAPPP10997 89 aa10.86□□□□□ -0.67
PDLIM3-213ENST00000629667 ANXA3P12429 323 aa10.86□□□□□ -0.67
PDLIM3-213ENST00000629667 GATA2P23769 480 aaPredicted RBP10.86□□□□□ -0.67
PDLIM3-213ENST00000629667 SRPXP78539 464 aa10.86□□□□□ -0.67
PDLIM3-213ENST00000629667 DLK1P80370 383 aa10.86□□□□□ -0.67
PDLIM3-213ENST00000629667 HIST1H1AQ02539 215 aaPredicted RBP10.86□□□□□ -0.67
PDLIM3-213ENST00000629667 OR10J6PQ8NGY7 276 aa10.86□□□□□ -0.67
PDLIM3-213ENST00000629667 SMIM4Q8WVI0 70 aa10.86□□□□□ -0.67
PDLIM3-213ENST00000629667 NOP10Q9NPE3 64 aaKnown RBP10.86□□□□□ -0.67
PDLIM3-213ENST00000629667 TRAV26-1A0A087WT03 109 aa10.85□□□□□ -0.67
PDLIM3-213ENST00000629667 A0A1W2PPQ1 181 aa10.85□□□□□ -0.67
PDLIM3-213ENST00000629667 ZNF493Q6ZR52 646 aa10.85□□□□□ -0.67
PDLIM3-213ENST00000629667 MIXL1Q9H2W2 232 aa10.85□□□□□ -0.67
PDLIM3-213ENST00000629667 SCP2D1Q9UJQ7 156 aa10.85□□□□□ -0.67
PDLIM3-213ENST00000629667 PIGBOS1A0A0B4J2F0 54 aa10.84□□□□□ -0.67
PDLIM3-213ENST00000629667 M6PRP20645 277 aa10.84□□□□□ -0.67
PDLIM3-213ENST00000629667 RPP30P78346 268 aaKnown RBP10.84□□□□□ -0.67
PDLIM3-213ENST00000629667 TMEM182Q6ZP80 229 aaPredicted RBP10.84□□□□□ -0.67
PDLIM3-213ENST00000629667 OR8A1Q8NGG7 326 aa10.84□□□□□ -0.67
PDLIM3-213ENST00000629667 RXFP4Q8TDU9 374 aa10.84□□□□□ -0.67
PDLIM3-213ENST00000629667 TMEM263Q8WUH6 116 aaKnown RBP10.84□□□□□ -0.67
PDLIM3-213ENST00000629667 ZNF503Q96F45 646 aa10.84□□□□□ -0.67
PDLIM3-213ENST00000629667 UPK3BQ9BT76 320 aa10.84□□□□□ -0.67
PDLIM3-213ENST00000629667 A0A0J9YY99 117 aa10.83□□□□□ -0.68
PDLIM3-213ENST00000629667 PITX3O75364 302 aa10.83□□□□□ -0.68
PDLIM3-213ENST00000629667 MED6O75586 246 aa10.83□□□□□ -0.68
PDLIM3-213ENST00000629667 ADAP1O75689 374 aa10.83□□□□□ -0.68
PDLIM3-213ENST00000629667 INAFM2P0DMQ5 153 aa10.83□□□□□ -0.68
PDLIM3-213ENST00000629667 RPL7P18124 248 aaKnown RBP10.83□□□□□ -0.68
PDLIM3-213ENST00000629667 AKR1C1Q04828 323 aa10.83□□□□□ -0.68
PDLIM3-213ENST00000629667 CTF1Q16619 201 aa10.83□□□□□ -0.68
PDLIM3-213ENST00000629667 ESRGQ1W209 222 aa10.83□□□□□ -0.68
PDLIM3-213ENST00000629667 RNASE8Q8TDE3 154 aaKnown RBP10.83□□□□□ -0.68
PDLIM3-213ENST00000629667 NAA50Q9GZZ1 169 aaKnown RBP10.83□□□□□ -0.68
PDLIM3-213ENST00000629667 ZNF586Q9NXT0 402 aa10.83□□□□□ -0.68
PDLIM3-213ENST00000629667 H3BRN7 92 aa10.82□□□□□ -0.68
PDLIM3-213ENST00000629667 CDKN1BP46527 198 aa10.82□□□□□ -0.68
PDLIM3-213ENST00000629667 RAP2BP61225 183 aa10.82□□□□□ -0.68
PDLIM3-213ENST00000629667 IL18Q14116 193 aa10.82□□□□□ -0.68
PDLIM3-213ENST00000629667 LRRC20Q8TCA0 184 aa10.82□□□□□ -0.68
PDLIM3-213ENST00000629667 CIB3Q96Q77 187 aaPredicted RBP10.82□□□□□ -0.68
PDLIM3-213ENST00000629667 MCUBQ9NWR8 336 aa10.82□□□□□ -0.68
PDLIM3-213ENST00000629667 PTTG2Q9NZH5 202 aa10.82□□□□□ -0.68
PDLIM3-213ENST00000629667 DUXBA0A1W2PPF3 345 aa10.81□□□□□ -0.68
PDLIM3-213ENST00000629667 ANKRD20A5PA0PJZ0 165 aa10.81□□□□□ -0.68
PDLIM3-213ENST00000629667 PRSS46E5RG02 174 aa10.81□□□□□ -0.68
PDLIM3-213ENST00000629667 H7BYZ3 331 aa10.81□□□□□ -0.68
PDLIM3-213ENST00000629667 ZNF701M0R085 212 aaPredicted RBP10.81□□□□□ -0.68
PDLIM3-213ENST00000629667 CTDSP2O14595 271 aa10.81□□□□□ -0.68
PDLIM3-213ENST00000629667 CTDSPLO15194 276 aa10.81□□□□□ -0.68
PDLIM3-213ENST00000629667 CXCL3P19876 107 aa10.81□□□□□ -0.68
PDLIM3-213ENST00000629667 PSG3Q16557 428 aa10.81□□□□□ -0.68
PDLIM3-213ENST00000629667 SHANK2-AS3Q9BTD1 123 aa10.81□□□□□ -0.68
PDLIM3-213ENST00000629667 HIGD1AQ9Y241 93 aa10.81□□□□□ -0.68
PDLIM3-213ENST00000629667 MRPS16Q9Y3D3 137 aaKnown RBP10.81□□□□□ -0.68
PDLIM3-213ENST00000629667 GAGE12BA1L429 117 aa10.8□□□□□ -0.68
PDLIM3-213ENST00000629667 WRBO00258 174 aa10.8□□□□□ -0.68
PDLIM3-213ENST00000629667 GAGE7O76087 117 aa10.8□□□□□ -0.68
PDLIM3-213ENST00000629667 RLN2P04090 185 aa10.8□□□□□ -0.68
PDLIM3-213ENST00000629667 IL5P05113 134 aa10.8□□□□□ -0.68
PDLIM3-213ENST00000629667 GAGE12FP0CL80 117 aa10.8□□□□□ -0.68
PDLIM3-213ENST00000629667 GAGE12GP0CL81 117 aa10.8□□□□□ -0.68
PDLIM3-213ENST00000629667 GAGE12IP0CL82 117 aa10.8□□□□□ -0.68
PDLIM3-213ENST00000629667 PRB4P10163 310 aaPredicted RBP10.8□□□□□ -0.68
PDLIM3-213ENST00000629667 HOXA5P20719 270 aa10.8□□□□□ -0.68
PDLIM3-213ENST00000629667 CCDC28AQ8IWP9 274 aa10.8□□□□□ -0.68
PDLIM3-213ENST00000629667 DIRAS2Q96HU8 199 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms