RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 H3BRM9 83 aa7□□□□□ -1.29
VCL-207ENST00000624354 PLAUP00749 431 aa7□□□□□ -1.29
VCL-207ENST00000624354 SLC25A5P05141 298 aaKnown RBP7□□□□□ -1.29
VCL-207ENST00000624354 SMIM17P0DL12 118 aa7□□□□□ -1.29
VCL-207ENST00000624354 GNG5P63218 68 aa7□□□□□ -1.29
VCL-207ENST00000624354 TEX36Q5VZQ5 186 aa7□□□□□ -1.29
VCL-207ENST00000624354 LINC00173Q6ZV60 143 aa7□□□□□ -1.29
VCL-207ENST00000624354 OR4A5Q8NH83 315 aa7□□□□□ -1.29
VCL-207ENST00000624354 WFDC12Q8WWY7 111 aa7□□□□□ -1.29
VCL-207ENST00000624354 ATP6V0BQ99437 205 aa7□□□□□ -1.29
VCL-207ENST00000624354 PMCHL2Q9BQD1 86 aa7□□□□□ -1.29
VCL-207ENST00000624354 SCNM1Q9BWG6 230 aa7□□□□□ -1.29
VCL-207ENST00000624354 JKAMPQ9P055 326 aa7□□□□□ -1.29
VCL-207ENST00000624354 EPDR1Q9UM22 224 aa7□□□□□ -1.29
VCL-207ENST00000624354 LRBAP50851 2863 aa7□□□□□ -1.29
VCL-207ENST00000624354 DSCAMO60469 2012 aa7□□□□□ -1.29
VCL-207ENST00000624354 RPL24P83731 157 aaKnown RBP7□□□□□ -1.29
VCL-207ENST00000624354 MEF2CQ06413 473 aaPredicted RBP7□□□□□ -1.29
VCL-207ENST00000624354 C10orf55Q5SWW7 151 aa7□□□□□ -1.29
VCL-207ENST00000624354 OR10X1Q8NGY0 326 aa7□□□□□ -1.29
VCL-207ENST00000624354 OR10AG1Q8NH19 301 aa7□□□□□ -1.29
VCL-207ENST00000624354 PERPQ96FX8 193 aa7□□□□□ -1.29
VCL-207ENST00000624354 ZNF835Q9Y2P0 537 aa7□□□□□ -1.29
VCL-207ENST00000624354 IGKV1D-37A0A075B6S9 117 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 PGPA6NDG6 321 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 H0Y8G0 127 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 CCL3L1P16619 93 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 ORM2P19652 201 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 PSG3Q16557 428 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 FAM120AOSQ5T036 256 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 THAP8Q8NA92 274 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 BLNKQ8WV28 456 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 GPR82Q96P67 336 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 JMJD8Q96S16 334 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 MAP1LC3CQ9BXW4 147 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 SNAI2O43623 268 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 HBBP68871 147 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 CCL8P80075 99 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 SSX8Q7RTT4 187 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 SGK494Q96LW2 274 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 NAA38Q9BRA0 125 aaKnown RBP6.99□□□□□ -1.29
VCL-207ENST00000624354 NPFFR1Q9GZQ6 430 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 ASH1LQ9NR48 2969 aaKnown RBP6.99□□□□□ -1.29
VCL-207ENST00000624354 IGHV1-24A0A0C4DH33 117 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 A0A1B0GXF2 115 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 TNFRSF1AP19438 455 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 MYCNOSP40205 109 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 OR5A1Q8NGJ0 315 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 URB1-AS1Q96HZ7 61 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 C7orf69Q9H7B7 122 aa6.99□□□□□ -1.29
VCL-207ENST00000624354 UTP20O75691 2785 aaKnown RBP6.99□□□□□ -1.29
VCL-207ENST00000624354 A0A0G2JLM5 398 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 CGB1A6NKQ9 187 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 A8MWL6 223 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 FSTL3O95633 263 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 COX8AP10176 69 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 C2orf91Q6ZV80 131 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 ZADH2Q8N4Q0 377 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 CHCHD1Q96BP2 118 aaKnown RBP6.98□□□□□ -1.29
VCL-207ENST00000624354 RPP21Q9H633 154 aaKnown RBP6.98□□□□□ -1.29
VCL-207ENST00000624354 PLXNB1O43157 2135 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 VWC2LB2RUY7 222 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 CD40P25942 277 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 VMA21Q3ZAQ7 101 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 ZCCHC24Q8N2G6 241 aaKnown RBP6.98□□□□□ -1.29
VCL-207ENST00000624354 RPRMLQ8N4K4 120 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 MCRIP2Q9BUT9 160 aaKnown RBP6.98□□□□□ -1.29
VCL-207ENST00000624354 THYN1Q9P016 225 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 MRPL36Q9P0J6 103 aaKnown RBP6.98□□□□□ -1.29
VCL-207ENST00000624354 KLF12Q9Y4X4 402 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 SPCS1Q9Y6A9 102 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 SVEP1Q4LDE5 3571 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 ITPR1Q14643 2758 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 PPIAL4EA0A075B759 164 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 PPIAL4CA0A0B4J2A2 164 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 MOSP00540 346 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 P01737 135 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 PPIAL4FP0DN26 164 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 HSD52Q0P140 79 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 TMEM200BQ69YZ2 307 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 H1FXQ92522 213 aaKnown RBP6.98□□□□□ -1.29
VCL-207ENST00000624354 DAZAP1Q96EP5 407 aaKnown RBP6.98□□□□□ -1.29
VCL-207ENST00000624354 FAM215AQ9Y5M1 114 aa6.98□□□□□ -1.29
VCL-207ENST00000624354 SOX21Q9Y651 276 aaPredicted RBP6.98□□□□□ -1.29
VCL-207ENST00000624354 K7EM74 188 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 SLC25A17O43808 307 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 LIPFP07098 398 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 RAB9AP51151 201 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 FOXA3P55318 350 aaPredicted RBP6.97□□□□□ -1.29
VCL-207ENST00000624354 FAM27E3Q08E93 113 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 CT83Q5H943 113 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 MLST8Q9BVC4 326 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 NOTCH3Q9UM47 2321 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 DSCAML1Q8TD84 2053 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 NOTCH2Q04721 2471 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 FLNCQ14315 2725 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 BSNQ9UPA5 3926 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 A0A1W2PPI3 338 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 OR5AL1P0C617 328 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 DIAPH2-AS1Q14236 149 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms