RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 IGLC1P0CG04 106 aa15.55■□□□□ 0.08
PDLIM3-212ENST00000620787 COX8AP10176 69 aa15.55■□□□□ 0.08
PDLIM3-212ENST00000620787 C2orf91Q6ZV80 131 aa15.55■□□□□ 0.08
PDLIM3-212ENST00000620787 SRSF12Q8WXF0 261 aaKnown RBP15.55■□□□□ 0.08
PDLIM3-212ENST00000620787 ZNF747Q9BV97 191 aa15.55■□□□□ 0.08
PDLIM3-212ENST00000620787 AP5S1Q9NUS5 200 aa15.55■□□□□ 0.08
PDLIM3-212ENST00000620787 F11RQ9Y624 299 aaKnown RBP15.55■□□□□ 0.08
PDLIM3-212ENST00000620787 GPR183P32249 361 aa15.54■□□□□ 0.08
PDLIM3-212ENST00000620787 TMEM155Q4W5P6 130 aa15.54■□□□□ 0.08
PDLIM3-212ENST00000620787 LDLRAD2Q5SZI1 272 aa15.54■□□□□ 0.08
PDLIM3-212ENST00000620787 RNF24Q9Y225 148 aa15.54■□□□□ 0.08
PDLIM3-212ENST00000620787 TEX22C9J3V5 150 aa15.54■□□□□ 0.08
PDLIM3-212ENST00000620787 NCR2O95944 276 aa15.54■□□□□ 0.08
PDLIM3-212ENST00000620787 IGHV1-8P0DP01 117 aa15.54■□□□□ 0.08
PDLIM3-212ENST00000620787 PSG9Q00887 426 aa15.54■□□□□ 0.08
PDLIM3-212ENST00000620787 CCL17Q92583 94 aa15.54■□□□□ 0.08
PDLIM3-212ENST00000620787 SIGLEC9Q9Y336 463 aa15.54■□□□□ 0.08
PDLIM3-212ENST00000620787 MALRD1Q5VYJ5 2156 aa15.53■□□□□ 0.08
PDLIM3-212ENST00000620787 RIGQ13278 110 aa15.53■□□□□ 0.08
PDLIM3-212ENST00000620787 COTL1Q14019 142 aa15.53■□□□□ 0.08
PDLIM3-212ENST00000620787 TMEM108Q6UXF1 575 aa15.53■□□□□ 0.08
PDLIM3-212ENST00000620787 M0R296 226 aa15.53■□□□□ 0.08
PDLIM3-212ENST00000620787 ASCL2Q99929 193 aa15.53■□□□□ 0.08
PDLIM3-212ENST00000620787 TRAV8-6A0A0B4J262 113 aa15.52■□□□□ 0.08
PDLIM3-212ENST00000620787 OCIAD2Q56VL3 154 aa15.52■□□□□ 0.08
PDLIM3-212ENST00000620787 ARL6IP6Q8N6S5 226 aa15.52■□□□□ 0.08
PDLIM3-212ENST00000620787 TMEM75Q8N9X5 138 aa15.51■□□□□ 0.07
PDLIM3-212ENST00000620787 TMEM133Q9H2Q1 129 aa15.51■□□□□ 0.07
PDLIM3-212ENST00000620787 CUL9Q8IWT3 2517 aa15.51■□□□□ 0.07
PDLIM3-212ENST00000620787 ABCA1O95477 2261 aa15.51■□□□□ 0.07
PDLIM3-212ENST00000620787 C17orf77Q96MU5 243 aa15.51■□□□□ 0.07
PDLIM3-212ENST00000620787 TRBV19A0A075B6N1 114 aa15.5■□□□□ 0.07
PDLIM3-212ENST00000620787 I3L2K1 104 aa15.5■□□□□ 0.07
PDLIM3-212ENST00000620787 FA2HQ7L5A8 372 aa15.5■□□□□ 0.07
PDLIM3-212ENST00000620787 WFDC8Q8IUA0 241 aa15.5■□□□□ 0.07
PDLIM3-212ENST00000620787 OR10AG1Q8NH19 301 aa15.5■□□□□ 0.07
PDLIM3-212ENST00000620787 ROS1P08922 2347 aa15.5■□□□□ 0.07
PDLIM3-212ENST00000620787 RBPJQ06330 500 aa15.5■□□□□ 0.07
PDLIM3-212ENST00000620787 BPIFA4PQ86YQ2 179 aa15.5■□□□□ 0.07
PDLIM3-212ENST00000620787 PRSS33Q8NF86 280 aa15.5■□□□□ 0.07
PDLIM3-212ENST00000620787 A0A096LNJ9 63 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 A0A1B0GW15 77 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 PRB4P10163 310 aaPredicted RBP15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 CSN1S1P47710 185 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 CRIP1P50238 77 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 DLX1P56177 255 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 ASCL5Q7RTU5 278 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 NGBQ9NPG2 151 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 SNAI2O43623 268 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 IGKV1-17P01599 117 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 RBP4P02753 201 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 FAM106CPP0CH98 169 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 FAM106AQ4KMX7 169 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 PPP1R27Q86WC6 154 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 PIP4P2Q8N4L2 257 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 PRSS3P2Q8NHM4 247 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 RASL11BQ9BPW5 248 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 PEF1Q9UBV8 284 aaKnown RBP15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 PSG8Q9UQ74 426 aa15.49■□□□□ 0.07
PDLIM3-212ENST00000620787 FTH1P19P0C7X4 201 aa15.48■□□□□ 0.07
PDLIM3-212ENST00000620787 FGF6P10767 208 aa15.48■□□□□ 0.07
PDLIM3-212ENST00000620787 BSPH1Q075Z2 132 aa15.48■□□□□ 0.07
PDLIM3-212ENST00000620787 SIGLEC15Q6ZMC9 328 aa15.48■□□□□ 0.07
PDLIM3-212ENST00000620787 PIP4P1Q86T03 277 aa15.48■□□□□ 0.07
PDLIM3-212ENST00000620787 SPAARA0A1B0GVQ0 90 aa15.48■□□□□ 0.07
PDLIM3-212ENST00000620787 IGFL3Q6UXB1 125 aa15.48■□□□□ 0.07
PDLIM3-212ENST00000620787 SHANK2-AS3Q9BTD1 123 aa15.48■□□□□ 0.07
PDLIM3-212ENST00000620787 SCNM1Q9BWG6 230 aa15.48■□□□□ 0.07
PDLIM3-212ENST00000620787 KAAG1Q9UBP8 84 aa15.48■□□□□ 0.07
PDLIM3-212ENST00000620787 RP1L1Q8IWN7 2480 aaPredicted RBP15.47■□□□□ 0.07
PDLIM3-212ENST00000620787 KLK10O43240 276 aa15.47■□□□□ 0.07
PDLIM3-212ENST00000620787 IFI27P40305 119 aaPredicted RBP15.47■□□□□ 0.07
PDLIM3-212ENST00000620787 LOXL1Q08397 574 aaPredicted RBP15.47■□□□□ 0.07
PDLIM3-212ENST00000620787 PSG3Q16557 428 aa15.47■□□□□ 0.07
PDLIM3-212ENST00000620787 IGHV1-3A0A0C4DH29 117 aa15.47■□□□□ 0.07
PDLIM3-212ENST00000620787 C7orf71A4D174 169 aa15.47■□□□□ 0.07
PDLIM3-212ENST00000620787 H3BRN7 92 aa15.47■□□□□ 0.07
PDLIM3-212ENST00000620787 PRB3Q04118 309 aaPredicted RBP15.47■□□□□ 0.07
PDLIM3-212ENST00000620787 TMEM97Q5BJF2 176 aa15.47■□□□□ 0.07
PDLIM3-212ENST00000620787 ZNF493Q6ZR52 646 aa15.47■□□□□ 0.07
PDLIM3-212ENST00000620787 DEFB124Q8NES8 71 aa15.47■□□□□ 0.07
PDLIM3-212ENST00000620787 TMEM190Q8WZ59 177 aa15.47■□□□□ 0.07
PDLIM3-212ENST00000620787 IGLV1-47P01700 117 aa15.46■□□□□ 0.07
PDLIM3-212ENST00000620787 SEC11AP67812 179 aa15.46■□□□□ 0.07
PDLIM3-212ENST00000620787 Q6AWC8 147 aa15.46■□□□□ 0.07
PDLIM3-212ENST00000620787 Q6ZS92 163 aa15.46■□□□□ 0.07
PDLIM3-212ENST00000620787 DPF1Q92782 380 aa15.46■□□□□ 0.07
PDLIM3-212ENST00000620787 VPS25Q9BRG1 176 aa15.46■□□□□ 0.07
PDLIM3-212ENST00000620787 FBXL15Q9H469 300 aa15.46■□□□□ 0.07
PDLIM3-212ENST00000620787 GAGE12BA1L429 117 aa15.46■□□□□ 0.06
PDLIM3-212ENST00000620787 THBDP07204 575 aa15.46■□□□□ 0.06
PDLIM3-212ENST00000620787 TPPP3Q9BW30 176 aa15.46■□□□□ 0.06
PDLIM3-212ENST00000620787 BDP1A6H8Y1 2624 aa15.45■□□□□ 0.06
PDLIM3-212ENST00000620787 C16orf97H3BN30 126 aa15.45■□□□□ 0.06
PDLIM3-212ENST00000620787 FAM57AQ8TBR7 257 aa15.45■□□□□ 0.06
PDLIM3-212ENST00000620787 TNFRSF14Q92956 283 aa15.45■□□□□ 0.06
PDLIM3-212ENST00000620787 INSIG2Q9Y5U4 225 aa15.45■□□□□ 0.06
PDLIM3-212ENST00000620787 K7EQM0 130 aa15.44■□□□□ 0.06
PDLIM3-212ENST00000620787 APOBEC3AP31941 199 aaPredicted RBP15.44■□□□□ 0.06
PDLIM3-212ENST00000620787 LYPD1Q8N2G4 141 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms