RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 MITD1Q8WV92 249 aa6.95□□□□□ -1.3
TARDBP-218ENST00000617172 FAM210BQ96KR6 192 aa6.95□□□□□ -1.3
TARDBP-218ENST00000617172 SDHCQ99643 169 aaPredicted RBP6.95□□□□□ -1.3
TARDBP-218ENST00000617172 SHANK2-AS3Q9BTD1 123 aa6.95□□□□□ -1.3
TARDBP-218ENST00000617172 NDUFAF3Q9BU61 184 aa6.95□□□□□ -1.3
TARDBP-218ENST00000617172 GGACTQ9BVM4 153 aa6.95□□□□□ -1.3
TARDBP-218ENST00000617172 SLC25A39Q9BZJ4 359 aaPredicted RBP6.95□□□□□ -1.3
TARDBP-218ENST00000617172 MGAT4CQ9UBM8 478 aa6.95□□□□□ -1.3
TARDBP-218ENST00000617172 CELA1Q9UNI1 258 aa6.95□□□□□ -1.3
TARDBP-218ENST00000617172 HIGD1AQ9Y241 93 aa6.95□□□□□ -1.3
TARDBP-218ENST00000617172 PLECQ15149 4684 aaKnown RBP6.95□□□□□ -1.3
TARDBP-218ENST00000617172 PMS2P5A8MQ11 134 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 A8MTW9 85 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 F6UB75 175 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 K7EPK0 472 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 HBE1P02100 147 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 LINC00869P0C866 280 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 P0DMU3 169 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 FAM231AP0DMU4 169 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 FAM231CP0DMU5 169 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 BTCP35070 178 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 FXYD7P58549 80 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 DEFB1P60022 68 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 ZNF846Q147U1 533 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 OXA1LQ15070 435 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 RRN3P1Q2M238 152 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 TMEM14EPQ6UXP3 125 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 SLC35B3Q9H1N7 401 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 GSKIPQ9P0R6 139 aa6.94□□□□□ -1.3
TARDBP-218ENST00000617172 EPPK1P58107 5090 aaKnown RBP6.93□□□□□ -1.3
TARDBP-218ENST00000617172 HYDINQ4G0P3 5121 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 H3BRN7 92 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 GOSR2O14653 212 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 SCGB1D2O95969 90 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 OR5G3P0C626 314 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 METTL15P1P0C7V9 234 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 EMP1P54849 157 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 PRR20EP86478 221 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 PRR20CP86479 221 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 PRR20DP86480 221 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 PRR20BP86481 221 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 PRR20AP86496 221 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 FGL1Q08830 312 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 C1orf158Q8N1D5 194 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 ZBTB8BQ8NAP8 495 aaPredicted RBP6.93□□□□□ -1.3
TARDBP-218ENST00000617172 C20orf173Q96LM9 149 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 IGF2BP2-AS1Q96M15 143 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 C17orf77Q96MU5 243 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 NIPSNAP3BQ9BS92 247 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 TMEM208Q9BTX3 173 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 SCRT1Q9BWW7 348 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 DKK2Q9UBU2 259 aa6.93□□□□□ -1.3
TARDBP-218ENST00000617172 A0A087X0K7 114 aa6.92□□□□□ -1.3
TARDBP-218ENST00000617172 C7orf66A4D0T2 115 aa6.92□□□□□ -1.3
TARDBP-218ENST00000617172 L7N2F9 121 aa6.92□□□□□ -1.3
TARDBP-218ENST00000617172 PLA2G10O15496 165 aa6.92□□□□□ -1.3
TARDBP-218ENST00000617172 LYRM1O43325 122 aa6.92□□□□□ -1.3
TARDBP-218ENST00000617172 MBPP02686 304 aaPredicted RBP6.92□□□□□ -1.3
TARDBP-218ENST00000617172 TCRBP04435 133 aa6.92□□□□□ -1.3
TARDBP-218ENST00000617172 CNN1P51911 297 aaKnown RBP6.92□□□□□ -1.3
TARDBP-218ENST00000617172 RRAS2P62070 204 aaPredicted RBP6.92□□□□□ -1.3
TARDBP-218ENST00000617172 VAMP2P63027 116 aa6.92□□□□□ -1.3
TARDBP-218ENST00000617172 RAB31Q13636 194 aa6.92□□□□□ -1.3
TARDBP-218ENST00000617172 AMTNQ6UX39 209 aa6.92□□□□□ -1.3
TARDBP-218ENST00000617172 ZNF767PQ75MW2 155 aa6.92□□□□□ -1.3
TARDBP-218ENST00000617172 ZNF546Q86UE3 836 aa6.92□□□□□ -1.3
TARDBP-218ENST00000617172 LRRC20Q8TCA0 184 aa6.92□□□□□ -1.3
TARDBP-218ENST00000617172 ARL6Q9H0F7 186 aa6.92□□□□□ -1.3
TARDBP-218ENST00000617172 C20orf85Q9H1P6 137 aa6.92□□□□□ -1.3
TARDBP-218ENST00000617172 TRAV8-2A0A0B4J237 113 aa6.91□□□□□ -1.3
TARDBP-218ENST00000617172 LOC102723971A0A1B0GUV8 181 aa6.91□□□□□ -1.3
TARDBP-218ENST00000617172 AGPAT2O15120 278 aa6.91□□□□□ -1.3
TARDBP-218ENST00000617172 CXCL2P19875 107 aa6.91□□□□□ -1.3
TARDBP-218ENST00000617172 FAM222AQ5U5X8 452 aa6.91□□□□□ -1.3
TARDBP-218ENST00000617172 LINC00299Q6ZSB3 139 aa6.91□□□□□ -1.3
TARDBP-218ENST00000617172 POM121L12Q8N7R1 296 aa6.91□□□□□ -1.3
TARDBP-218ENST00000617172 ZNF738Q8NE65 137 aa6.91□□□□□ -1.3
TARDBP-218ENST00000617172 OR11H7Q8NGC8 314 aa6.91□□□□□ -1.3
TARDBP-218ENST00000617172 UHRF2Q96PU4 802 aa6.91□□□□□ -1.3
TARDBP-218ENST00000617172 CCDC32Q9BV29 185 aa6.91□□□□□ -1.3
TARDBP-218ENST00000617172 ARV1Q9H2C2 271 aa6.91□□□□□ -1.3
TARDBP-218ENST00000617172 PPP1R14DQ9NXH3 145 aa6.91□□□□□ -1.3
TARDBP-218ENST00000617172 RCL1Q9Y2P8 373 aaKnown RBP6.91□□□□□ -1.3
TARDBP-218ENST00000617172 YTHDF2Q9Y5A9 579 aaKnown RBP6.91□□□□□ -1.3
TARDBP-218ENST00000617172 BIRC6Q9NR09 4857 aa6.91□□□□□ -1.3
TARDBP-218ENST00000617172 C5orf51A6NDU8 294 aa6.9□□□□□ -1.3
TARDBP-218ENST00000617172 CCNKO75909 580 aa6.9□□□□□ -1.3
TARDBP-218ENST00000617172 INSP01308 110 aa6.9□□□□□ -1.3
TARDBP-218ENST00000617172 CXCL3P19876 107 aa6.9□□□□□ -1.3
TARDBP-218ENST00000617172 PVALBP20472 110 aaPredicted RBP6.9□□□□□ -1.3
TARDBP-218ENST00000617172 TSPOP30536 169 aa6.9□□□□□ -1.3
TARDBP-218ENST00000617172 PSG3Q16557 428 aa6.9□□□□□ -1.3
TARDBP-218ENST00000617172 IGFL4Q6B9Z1 124 aa6.9□□□□□ -1.3
TARDBP-218ENST00000617172 LCN15Q6UWW0 184 aa6.9□□□□□ -1.3
TARDBP-218ENST00000617172 PATE2Q6UY27 113 aa6.9□□□□□ -1.3
TARDBP-218ENST00000617172 Q6ZRG5 221 aa6.9□□□□□ -1.3
TARDBP-218ENST00000617172 LINC00336Q6ZUF6 198 aa6.9□□□□□ -1.3
TARDBP-218ENST00000617172 LINC00305Q7Z4B0 112 aa6.9□□□□□ -1.3
TARDBP-218ENST00000617172 BPIFA4PQ86YQ2 179 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms