RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 TRAV18A0A075B6X5 111 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 TRAV5A0A0B4J249 113 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 RGS13O14921 159 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 IGHV3-53P01767 116 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 PMP2P02689 132 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 OR5AC1P0C628 307 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 PSMA1P25786 263 aaKnown RBP4.46□□□□□ -1.7
MUC1-227ENST00000615517 CDKN1BP46527 198 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 LYZP61626 148 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 GFI1BQ5VTD9 330 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 CCDC28AQ8IWP9 274 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 C11orf72Q8NBR9 251 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 ZNF738Q8NE65 137 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 OR8A1Q8NGG7 326 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 OR52E5Q8NH55 327 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 RNASEH2CQ8TDP1 164 aaKnown RBP4.46□□□□□ -1.7
MUC1-227ENST00000615517 RRNAD1Q96FB5 475 aaKnown RBP4.46□□□□□ -1.7
MUC1-227ENST00000615517 C8orf49Q96NF6 230 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 ENY2Q9NPA8 101 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 PRO0255Q9UI72 69 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 FUT9Q9Y231 359 aa4.46□□□□□ -1.7
MUC1-227ENST00000615517 RRP15Q9Y3B9 282 aaKnown RBP4.46□□□□□ -1.7
MUC1-227ENST00000615517 PTGES3LE9PB15 166 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 K7EQD1 137 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 CIB2O75838 187 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 SCGNO76038 276 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 GALR1P47211 349 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 SCAND1P57086 179 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 FHL2Q14192 279 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 PSG3Q16557 428 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 ZFP1Q6P2D0 407 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 RBPMSQ93062 196 aaKnown RBP4.45□□□□□ -1.7
MUC1-227ENST00000615517 PPP1R14BQ96C90 147 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 ARPC5LQ9BPX5 153 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 C20orf144Q9BQM9 153 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 PAXXQ9BUH6 204 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 PDCD10Q9BUL8 212 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 AUNIPQ9H7T9 357 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 ACOT13Q9NPJ3 140 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 GSN-AS1Q9NRJ2 163 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 RHBDL2Q9NX52 303 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 PPP1R14DQ9NXH3 145 aa4.45□□□□□ -1.7
MUC1-227ENST00000615517 TRGV1A0A0A0MS02 117 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 GYPEP15421 78 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 GATA2P23769 480 aaPredicted RBP4.44□□□□□ -1.7
MUC1-227ENST00000615517 CBX5P45973 191 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 ZNF415Q09FC8 603 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 MLLT11Q13015 90 aaPredicted RBP4.44□□□□□ -1.7
MUC1-227ENST00000615517 OR2F1Q13607 317 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 AARDQ4LEZ3 155 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 ANKRD39Q53RE8 183 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 LINC01556Q5JQF7 62 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 IDNKQ5T6J7 187 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 ETFRF1Q6IPR1 90 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 THAP8Q8NA92 274 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 SLC25A38Q96DW6 304 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 ST6GAL2Q96JF0 529 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 TP53RKQ96S44 253 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 SLC25A22Q9H936 323 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 HEYLQ9NQ87 328 aaPredicted RBP4.44□□□□□ -1.7
MUC1-227ENST00000615517 ANAPC10Q9UM13 185 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 HHLA3Q9XRX5 114 aa4.44□□□□□ -1.7
MUC1-227ENST00000615517 IGHV3-38A0A0C4DH36 116 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 RBFOX3A6NFN3 312 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 E5RGE8 158 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 SPINK4O60575 86 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 CXCL3P19876 107 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 MYL9P24844 172 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 SRIP30626 198 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 AKR1C2P52895 323 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 SPCS3P61009 180 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 FGL1Q08830 312 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 KLF9Q13886 244 aaPredicted RBP4.43□□□□□ -1.7
MUC1-227ENST00000615517 MORN5Q5VZ52 161 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 C9orf47Q6ZRZ4 202 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 C8orf59Q8N0T1 100 aaPredicted RBP4.43□□□□□ -1.7
MUC1-227ENST00000615517 DHRSXQ8N5I4 330 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 OR5H6Q8NGV6 325 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 BAALCQ8WXS3 180 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 LINC01600Q96MT4 127 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 MRPL32Q9BYC8 188 aaKnown RBP4.43□□□□□ -1.7
MUC1-227ENST00000615517 CRCT1Q9UGL9 99 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 KLF12Q9Y4X4 402 aa4.43□□□□□ -1.7
MUC1-227ENST00000615517 IGKV1OR2-108A0A075B7D4 117 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 ZFP92A6NM28 416 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 NOTOA8MTQ0 251 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 SNRPGP15A8MWD9 76 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 J3KRW8 73 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 IGHV3-30P01768 117 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 IGHV3-33P01772 117 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 IGHV3-30-3P0DP02 117 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 IGHV3-30-5P0DP03 117 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 NAT1P18440 290 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 ID3Q02535 119 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 TDRG1Q3Y452 100 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 NMSQ5H8A3 153 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 C22orf42Q6IC83 251 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 LYSMD2Q8IV50 215 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 SPARTQ8N0X7 666 aa4.42□□□□□ -1.7
MUC1-227ENST00000615517 OR4D5Q8NGN0 318 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms