RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 RNF2Q99496 336 aa2.68□□□□□ -1.98
LIG4-205ENST00000614526 MRPL27Q9P0M9 148 aaKnown RBP2.68□□□□□ -1.98
LIG4-205ENST00000614526 B4DEV8 164 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 PEX7O00628 323 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 GOSR1O95249 250 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 TOMM40O96008 361 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 PFN1P07737 140 aaKnown RBP2.67□□□□□ -1.98
LIG4-205ENST00000614526 S100PP25815 95 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 UBE2G1P62253 170 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 TEX38Q6PEX7 206 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 TOMM20LQ6UXN7 152 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 OR1L6Q8NGR2 347 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 FAM110DQ8TAY7 271 aaPredicted RBP2.67□□□□□ -1.98
LIG4-205ENST00000614526 CMTM2Q8TAZ6 248 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 FRZBQ92765 325 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 CCDC140Q96MF4 163 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 YPEL4Q96NS1 127 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 MEGF9Q9H1U4 602 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 TUBA4BQ9H853 241 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 EPDR1Q9UM22 224 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 A6NDX4 124 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 ZNF705FA8MVS1 300 aaPredicted RBP2.67□□□□□ -1.98
LIG4-205ENST00000614526 HOXA3O43365 443 aaPredicted RBP2.67□□□□□ -1.98
LIG4-205ENST00000614526 CNN1P51911 297 aaKnown RBP2.67□□□□□ -1.98
LIG4-205ENST00000614526 ATP5G2Q06055 141 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 FABP9Q0Z7S8 132 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 GFI1BQ5VTD9 330 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 PRNTQ86SH4 94 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 BPIFA4PQ86YQ2 179 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 OR4F17Q8NGA8 305 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 IMMP2LQ96T52 175 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 SRSF8Q9BRL6 282 aaKnown RBP2.67□□□□□ -1.98
LIG4-205ENST00000614526 SHANK2-AS3Q9BTD1 123 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 ZNF785A8K8V0 405 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 IGLV2-8P01709 118 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 FABP1P07148 127 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 HIST1H1BP16401 226 aaKnown RBP2.67□□□□□ -1.98
LIG4-205ENST00000614526 SRD5A1P18405 259 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 RPL11P62913 178 aaKnown RBP2.67□□□□□ -1.98
LIG4-205ENST00000614526 FLI1Q01543 452 aaPredicted RBP2.67□□□□□ -1.98
LIG4-205ENST00000614526 ZNF502Q8TBZ5 544 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 ZNF48Q96MX3 618 aaPredicted RBP2.67□□□□□ -1.98
LIG4-205ENST00000614526 PSMG3-AS1Q96PY0 264 aa2.67□□□□□ -1.98
LIG4-205ENST00000614526 NOTCH3Q9UM47 2321 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 TRAV30A0A087WSZ9 112 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 IGKV2-40A0A087WW87 121 aaPredicted RBP2.66□□□□□ -1.98
LIG4-205ENST00000614526 WI2-2373I1.2A0A1W2PRP0 233 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 PCP4L1A6NKN8 68 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 ZNF705GA8MUZ8 300 aaPredicted RBP2.66□□□□□ -1.98
LIG4-205ENST00000614526 H3BRN7 92 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 GGCTO75223 188 aaKnown RBP2.66□□□□□ -1.98
LIG4-205ENST00000614526 IGKV2D-40P01614 121 aaPredicted RBP2.66□□□□□ -1.98
LIG4-205ENST00000614526 TRGC1P0CF51 173 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 HIST1H1EP10412 219 aaKnown RBP2.66□□□□□ -1.98
LIG4-205ENST00000614526 EDN2P20800 178 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 DEFB1P60022 68 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 RAB4BP61018 213 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 IBA57Q5T440 356 aaKnown RBP2.66□□□□□ -1.98
LIG4-205ENST00000614526 MRPL54Q6P161 138 aaKnown RBP2.66□□□□□ -1.98
LIG4-205ENST00000614526 UNQ9165/PRO28630Q6UXU0 137 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 LINC00322Q6ZN03 302 aaPredicted RBP2.66□□□□□ -1.98
LIG4-205ENST00000614526 RNF182Q8N6D2 247 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 C11orf44Q8N8P7 122 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 STXBP6Q8NFX7 210 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 C11orf52Q96A22 123 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 EEF1AKMT3Q96AZ1 226 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 ANAPC16Q96DE5 110 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 SMR3AQ99954 134 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 TXNDC17Q9BRA2 123 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 CTDSP1Q9GZU7 261 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 RABAC1Q9UI14 185 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 PDZD2O15018 2839 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 TRBV19A0A075B6N1 114 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 TMSB15BA0A087X1C1 80 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 A0A1B0GUS0 222 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 CXorf65A6NEN9 183 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 HIST1H2BKO60814 126 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 TCRAP04437 139 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 HIST1H2BJP06899 126 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 ZNF705DP0CH99 300 aaPredicted RBP2.66□□□□□ -1.98
LIG4-205ENST00000614526 ZNF705BP0CI00 300 aaPredicted RBP2.66□□□□□ -1.98
LIG4-205ENST00000614526 GZMBP10144 247 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 CBLN1P23435 193 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 HIST1H2BOP23527 126 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 HIST1H2BBP33778 126 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 ARL3P36405 182 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 HIST1H2BDP58876 126 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 PLP1P60201 277 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 YPEL3P61236 119 aaPredicted RBP2.66□□□□□ -1.98
LIG4-205ENST00000614526 HIST1H2BCP62807 126 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 LOXL1Q08397 574 aaPredicted RBP2.66□□□□□ -1.98
LIG4-205ENST00000614526 HIST2H2BEQ16778 126 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 KIAA1644Q3SXP7 199 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.66□□□□□ -1.98
LIG4-205ENST00000614526 KRTAP1-3Q8IUG1 177 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 HIST1H2BHQ93079 126 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 ZNF414Q96IQ9 312 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 TMEM68Q96MH6 324 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 HIST1H2BNQ99877 126 aa2.66□□□□□ -1.98
LIG4-205ENST00000614526 HIST1H2BMQ99879 126 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms