RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 TRAV12-1A0A0B4J245 112 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 A8MWV9 139 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 NKAPP1Q8N9T2 125 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 SNHG12Q9BXW3 62 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 CADP27708 2225 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 RPRMLQ8N4K4 120 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 DOPEY2Q9Y3R5 2298 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 KIAA2026Q5HYC2 2103 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 EREGO14944 169 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 LEPROTO15243 131 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 ATP6V0BQ99437 205 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 IGKV1-12A0A0C4DH73 117 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 IGKV1D-12P01611 117 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 ATP5IP56385 69 aaPredicted RBP12.62□□□□□ -0.39
TNXB-209ENST00000613214 LAMTOR2Q9Y2Q5 125 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 KIF26BQ2KJY2 2108 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 CLPSL1A2RUU4 121 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.62□□□□□ -0.39
TNXB-209ENST00000613214 ZNF479Q96JC4 524 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 IGF2BP2-AS1Q96M15 143 aa12.62□□□□□ -0.39
TNXB-209ENST00000613214 MST1P26927 711 aa12.61□□□□□ -0.39
TNXB-209ENST00000613214 RASL10AQ92737 203 aa12.61□□□□□ -0.39
TNXB-209ENST00000613214 RNF166Q96A37 237 aaPredicted RBP12.61□□□□□ -0.39
TNXB-209ENST00000613214 RNF126Q9BV68 326 aa12.61□□□□□ -0.39
TNXB-209ENST00000613214 RSPO3Q9BXY4 272 aaPredicted RBP12.61□□□□□ -0.39
TNXB-209ENST00000613214 A0A1W2PRE2 83 aa12.61□□□□□ -0.39
TNXB-209ENST00000613214 IGKV1-5P01602 117 aa12.61□□□□□ -0.39
TNXB-209ENST00000613214 TRBV7-1A0A0A6YYK4 115 aa12.61□□□□□ -0.39
TNXB-209ENST00000613214 KLHDC3Q9BQ90 382 aa12.61□□□□□ -0.39
TNXB-209ENST00000613214 RNF144BQ7Z419 303 aa12.61□□□□□ -0.39
TNXB-209ENST00000613214 GGNQ86UU5 652 aa12.61□□□□□ -0.39
TNXB-209ENST00000613214 TMEM158Q8WZ71 300 aa12.61□□□□□ -0.39
TNXB-209ENST00000613214 GHRHP01286 108 aa12.61□□□□□ -0.39
TNXB-209ENST00000613214 LGALS1P09382 135 aaKnown RBP12.61□□□□□ -0.39
TNXB-209ENST00000613214 ZFP36L1Q07352 338 aaKnown RBP12.61□□□□□ -0.39
TNXB-209ENST00000613214 NEGR1Q7Z3B1 354 aa12.61□□□□□ -0.39
TNXB-209ENST00000613214 IGKV1-27A0A075B6S5 117 aa12.6□□□□□ -0.39
TNXB-209ENST00000613214 A0A1B0GW15 77 aa12.6□□□□□ -0.39
TNXB-209ENST00000613214 F2Z2F3 143 aa12.6□□□□□ -0.39
TNXB-209ENST00000613214 C2orf82Q6UX34 121 aa12.6□□□□□ -0.39
TNXB-209ENST00000613214 LINC00518Q8N0U6 118 aa12.6□□□□□ -0.39
TNXB-209ENST00000613214 EFNA2O43921 213 aa12.6□□□□□ -0.39
TNXB-209ENST00000613214 GAFA1Q96PS6 74 aa12.6□□□□□ -0.39
TNXB-209ENST00000613214 G3V318 75 aa12.6□□□□□ -0.39
TNXB-209ENST00000613214 NYNRINQ9P2P1 1898 aaKnown RBP12.6□□□□□ -0.39
TNXB-209ENST00000613214 TRAV26-2A0A0B4J265 109 aa12.6□□□□□ -0.39
TNXB-209ENST00000613214 RNF222A6NCQ9 220 aa12.6□□□□□ -0.39
TNXB-209ENST00000613214 PMVKQ15126 192 aa12.6□□□□□ -0.39
TNXB-209ENST00000613214 NABP1Q96AH0 204 aa12.6□□□□□ -0.39
TNXB-209ENST00000613214 AZU1P20160 251 aa12.6□□□□□ -0.39
TNXB-209ENST00000613214 TREML4Q6UXN2 200 aa12.6□□□□□ -0.39
TNXB-209ENST00000613214 IGKV1OR2-108A0A075B7D4 117 aa12.59□□□□□ -0.39
TNXB-209ENST00000613214 E7EQL1 145 aa12.59□□□□□ -0.39
TNXB-209ENST00000613214 LAIR2Q6ISS4 152 aa12.59□□□□□ -0.39
TNXB-209ENST00000613214 C20orf204Q6ZNR8 217 aa12.59□□□□□ -0.39
TNXB-209ENST00000613214 H0YJW9 148 aa12.59□□□□□ -0.39
TNXB-209ENST00000613214 MTURNQ8N3F0 131 aa12.59□□□□□ -0.39
TNXB-209ENST00000613214 MDS2Q8NDY4 140 aa12.59□□□□□ -0.39
TNXB-209ENST00000613214 LOC285556D6RIA3 1793 aa12.59□□□□□ -0.39
TNXB-209ENST00000613214 CEP250Q9BV73 2442 aa12.59□□□□□ -0.39
TNXB-209ENST00000613214 PHF3Q92576 2039 aaKnown RBP12.59□□□□□ -0.39
TNXB-209ENST00000613214 BRCA1P38398 1863 aaKnown RBP12.59□□□□□ -0.39
TNXB-209ENST00000613214 AMN1Q8IY45 258 aa12.59□□□□□ -0.39
TNXB-209ENST00000613214 LINC00479Q96M42 142 aa12.59□□□□□ -0.39
TNXB-209ENST00000613214 C5orf64Q2M2E5 130 aa12.59□□□□□ -0.39
TNXB-209ENST00000613214 GGTLC1Q9BX51 225 aa12.59□□□□□ -0.39
TNXB-209ENST00000613214 LOC102723996A0A087X1L8 192 aa12.58□□□□□ -0.39
TNXB-209ENST00000613214 SIPA1L3O60292 1781 aaPredicted RBP12.58□□□□□ -0.4
TNXB-209ENST00000613214 IGKV1-39P01597 117 aa12.58□□□□□ -0.4
TNXB-209ENST00000613214 IGKV1D-39P04432 117 aa12.58□□□□□ -0.4
TNXB-209ENST00000613214 TRIOBPQ9H2D6 2365 aa12.58□□□□□ -0.4
TNXB-209ENST00000613214 RS1O15537 224 aa12.58□□□□□ -0.4
TNXB-209ENST00000613214 IL18BPO95998 194 aa12.58□□□□□ -0.4
TNXB-209ENST00000613214 IGFBP3P17936 291 aaPredicted RBP12.58□□□□□ -0.4
TNXB-209ENST00000613214 TMEM238C9JI98 176 aa12.58□□□□□ -0.4
TNXB-209ENST00000613214 ATP6V0E1O15342 81 aa12.58□□□□□ -0.4
TNXB-209ENST00000613214 GUSBP1Q15486 140 aa12.58□□□□□ -0.4
TNXB-209ENST00000613214 RASL11AQ6T310 242 aa12.57□□□□□ -0.4
TNXB-209ENST00000613214 LINC01619G3V211 115 aa12.57□□□□□ -0.4
TNXB-209ENST00000613214 TSKUQ8WUA8 353 aa12.57□□□□□ -0.4
TNXB-209ENST00000613214 TIMM21Q9BVV7 248 aa12.57□□□□□ -0.4
TNXB-209ENST00000613214 BCL6BQ8N143 479 aaPredicted RBP12.57□□□□□ -0.4
TNXB-209ENST00000613214 SPOCK3Q9BQ16 436 aa12.57□□□□□ -0.4
TNXB-209ENST00000613214 PLSCR4Q9NRQ2 329 aa12.57□□□□□ -0.4
TNXB-209ENST00000613214 DKK4Q9UBT3 224 aa12.57□□□□□ -0.4
TNXB-209ENST00000613214 C22orf46C9J442 243 aa12.57□□□□□ -0.4
TNXB-209ENST00000613214 CFHR2P36980 270 aa12.57□□□□□ -0.4
TNXB-209ENST00000613214 SLC25A48Q6ZT89 311 aaKnown RBP12.57□□□□□ -0.4
TNXB-209ENST00000613214 COX11Q9Y6N1 276 aa12.57□□□□□ -0.4
TNXB-209ENST00000613214 MED12Q93074 2177 aa12.57□□□□□ -0.4
TNXB-209ENST00000613214 Q6ZQT7 251 aa12.57□□□□□ -0.4
TNXB-209ENST00000613214 MRPS18CQ9Y3D5 142 aaKnown RBP12.57□□□□□ -0.4
TNXB-209ENST00000613214 FREM3P0C091 2139 aa12.57□□□□□ -0.4
TNXB-209ENST00000613214 LINC00473A8K010 186 aa12.56□□□□□ -0.4
TNXB-209ENST00000613214 MSMBP08118 114 aa12.56□□□□□ -0.4
TNXB-209ENST00000613214 NR2C2APQ86WQ0 139 aa12.56□□□□□ -0.4
TNXB-209ENST00000613214 ZMAT4Q9H898 229 aa12.56□□□□□ -0.4
TNXB-209ENST00000613214 CR1LQ2VPA4 569 aa12.56□□□□□ -0.4
TNXB-209ENST00000613214 KLF12Q9Y4X4 402 aa12.56□□□□□ -0.4
TNXB-209ENST00000613214 LRRK1Q38SD2 2015 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms