RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 TIMM23BQ5SRD1 257 aa13.19□□□□□ -0.3
TSKU-205ENST00000612930 C1orf162Q8NEQ5 155 aaPredicted RBP13.19□□□□□ -0.3
TSKU-205ENST00000612930 SVIPQ8NHG7 77 aa13.19□□□□□ -0.3
TSKU-205ENST00000612930 OTORQ9NRC9 128 aa13.19□□□□□ -0.3
TSKU-205ENST00000612930 D6R8Y8 96 aa13.19□□□□□ -0.3
TSKU-205ENST00000612930 SMIM13P0DJ93 91 aa13.19□□□□□ -0.3
TSKU-205ENST00000612930 SCGB1A1P11684 91 aa13.19□□□□□ -0.3
TSKU-205ENST00000612930 SMAGPQ0VAQ4 97 aa13.19□□□□□ -0.3
TSKU-205ENST00000612930 SMPXQ9UHP9 88 aa13.19□□□□□ -0.3
TSKU-205ENST00000612930 DSPP15924 2871 aaKnown RBP13.19□□□□□ -0.3
TSKU-205ENST00000612930 IGHV3-21A0A0B4J1V1 117 aa13.18□□□□□ -0.3
TSKU-205ENST00000612930 IGLV2-23P01705 113 aa13.18□□□□□ -0.3
TSKU-205ENST00000612930 PAX8Q06710 450 aa13.18□□□□□ -0.3
TSKU-205ENST00000612930 HCP5Q6MZN7 132 aa13.18□□□□□ -0.3
TSKU-205ENST00000612930 ZNF414Q96IQ9 312 aa13.18□□□□□ -0.3
TSKU-205ENST00000612930 SIGMAR1Q99720 223 aa13.18□□□□□ -0.3
TSKU-205ENST00000612930 FXYD2P54710 66 aa13.18□□□□□ -0.3
TSKU-205ENST00000612930 DIAPH2-AS1Q14236 149 aa13.18□□□□□ -0.3
TSKU-205ENST00000612930 C8orf46Q8TAG6 207 aa13.18□□□□□ -0.3
TSKU-205ENST00000612930 CLUHP3Q96NS8 147 aa13.18□□□□□ -0.3
TSKU-205ENST00000612930 TPPP3Q9BW30 176 aa13.18□□□□□ -0.3
TSKU-205ENST00000612930 TPSG1Q9NRR2 321 aa13.18□□□□□ -0.3
TSKU-205ENST00000612930 SIT1Q9Y3P8 196 aa13.18□□□□□ -0.3
TSKU-205ENST00000612930 CADP27708 2225 aa13.18□□□□□ -0.3
TSKU-205ENST00000612930 CRIP1P50238 77 aa13.17□□□□□ -0.3
TSKU-205ENST00000612930 PSG3Q16557 428 aa13.17□□□□□ -0.3
TSKU-205ENST00000612930 ZNF493Q6ZR52 646 aa13.17□□□□□ -0.3
TSKU-205ENST00000612930 SVILO95425 2214 aa13.17□□□□□ -0.3
TSKU-205ENST00000612930 A0A1B0GW15 77 aa13.17□□□□□ -0.3
TSKU-205ENST00000612930 C9orf106Q8NAJ2 232 aa13.17□□□□□ -0.3
TSKU-205ENST00000612930 U3KQK5 164 aa13.17□□□□□ -0.3
TSKU-205ENST00000612930 SERTM2A0A1B0GWG4 89 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 A0A1W2PNU3 283 aaPredicted RBP13.16□□□□□ -0.3
TSKU-205ENST00000612930 TM4SF5O14894 197 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 S100A7AQ86SG5 101 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 OR4C13Q8NGP0 309 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 OR10X1Q8NGY0 326 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 IFI27L1Q96BM0 104 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 PRELID3AQ96N28 172 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 DKK4Q9UBT3 224 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 DKK2Q9UBU2 259 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 MRGPRG-AS1Q2M3A8 158 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 ZNF788Q6ZQV5 615 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 RNF7Q9UBF6 113 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 TRBV6-1A0A0K0K1D8 114 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 TMEM213A2RRL7 107 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 K7ERJ3 54 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 HBDP02042 147 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 GCSHP23434 173 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 TMEM30BQ3MIR4 351 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 AMN1Q8IY45 258 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 BCL6BQ8N143 479 aaPredicted RBP13.16□□□□□ -0.3
TSKU-205ENST00000612930 PHLDA1Q8WV24 401 aaPredicted RBP13.16□□□□□ -0.3
TSKU-205ENST00000612930 VGLL1Q99990 258 aa13.16□□□□□ -0.3
TSKU-205ENST00000612930 TSSC4Q9Y5U2 329 aaPredicted RBP13.16□□□□□ -0.3
TSKU-205ENST00000612930 RITA1Q96K30 269 aa13.15□□□□□ -0.3
TSKU-205ENST00000612930 PRRC2CQ9Y520 2896 aaKnown RBP13.15□□□□□ -0.3
TSKU-205ENST00000612930 ZNF207O43670 478 aaKnown RBP13.15□□□□□ -0.31
TSKU-205ENST00000612930 SLC25A17O43808 307 aa13.15□□□□□ -0.31
TSKU-205ENST00000612930 NDUFS7O75251 213 aa13.15□□□□□ -0.31
TSKU-205ENST00000612930 TNFRSF1AP19438 455 aa13.15□□□□□ -0.31
TSKU-205ENST00000612930 BMI1P35226 326 aa13.15□□□□□ -0.31
TSKU-205ENST00000612930 PVRIGQ6DKI7 326 aa13.15□□□□□ -0.31
TSKU-205ENST00000612930 TTTY13Q9BZ97 58 aa13.15□□□□□ -0.31
TSKU-205ENST00000612930 HIGD1AQ9Y241 93 aa13.15□□□□□ -0.31
TSKU-205ENST00000612930 IGKV2D-26A0A0A0MRZ7 120 aa13.14□□□□□ -0.31
TSKU-205ENST00000612930 GAGE12HA6NDE8 117 aa13.14□□□□□ -0.31
TSKU-205ENST00000612930 FTH1P19P0C7X4 201 aa13.14□□□□□ -0.31
TSKU-205ENST00000612930 APELAP0DMC3 54 aa13.14□□□□□ -0.31
TSKU-205ENST00000612930 CD300EQ496F6 205 aaPredicted RBP13.14□□□□□ -0.31
TSKU-205ENST00000612930 FAM104BQ5XKR9 115 aa13.14□□□□□ -0.31
TSKU-205ENST00000612930 DHRS13Q6UX07 377 aa13.14□□□□□ -0.31
TSKU-205ENST00000612930 WFDC3Q8IUB2 231 aa13.14□□□□□ -0.31
TSKU-205ENST00000612930 ICE1Q9Y2F5 2266 aa13.14□□□□□ -0.31
TSKU-205ENST00000612930 FBLL1A6NHQ2 334 aaKnown RBP13.14□□□□□ -0.31
TSKU-205ENST00000612930 CCL3L1P16619 93 aa13.14□□□□□ -0.31
TSKU-205ENST00000612930 C17orf77Q96MU5 243 aa13.14□□□□□ -0.31
TSKU-205ENST00000612930 ZNF71Q9NQZ8 489 aaPredicted RBP13.14□□□□□ -0.31
TSKU-205ENST00000612930 INTS1Q8N201 2190 aaKnown RBP13.13□□□□□ -0.31
TSKU-205ENST00000612930 WI2-2373I1.2A0A1W2PRP0 233 aa13.13□□□□□ -0.31
TSKU-205ENST00000612930 GATA4P43694 442 aa13.13□□□□□ -0.31
TSKU-205ENST00000612930 MRPL51Q4U2R6 128 aaKnown RBP13.13□□□□□ -0.31
TSKU-205ENST00000612930 ORMDL3Q8N138 153 aa13.13□□□□□ -0.31
TSKU-205ENST00000612930 SLC25A39Q9BZJ4 359 aaPredicted RBP13.13□□□□□ -0.31
TSKU-205ENST00000612930 TMEM14CQ9P0S9 112 aa13.13□□□□□ -0.31
TSKU-205ENST00000612930 PSG8Q9UQ74 426 aa13.13□□□□□ -0.31
TSKU-205ENST00000612930 SLC25A15Q9Y619 301 aa13.13□□□□□ -0.31
TSKU-205ENST00000612930 LYZP61626 148 aa13.13□□□□□ -0.31
TSKU-205ENST00000612930 ATP1A1-AS1Q5TC04 95 aa13.13□□□□□ -0.31
TSKU-205ENST00000612930 LYZL1Q6UWQ5 148 aa13.13□□□□□ -0.31
TSKU-205ENST00000612930 TMEM75Q8N9X5 138 aa13.13□□□□□ -0.31
TSKU-205ENST00000612930 SPANXB1Q9NS25 103 aaPredicted RBP13.13□□□□□ -0.31
TSKU-205ENST00000612930 LINC00312Q9Y6C7 94 aa13.13□□□□□ -0.31
TSKU-205ENST00000612930 WFDC2Q14508 124 aa13.12□□□□□ -0.31
TSKU-205ENST00000612930 Q6AWC8 147 aa13.12□□□□□ -0.31
TSKU-205ENST00000612930 ATP6V0BQ99437 205 aa13.12□□□□□ -0.31
TSKU-205ENST00000612930 CT45A10P0DMU9 189 aa13.12□□□□□ -0.31
TSKU-205ENST00000612930 HIGD1BQ9P298 99 aa13.12□□□□□ -0.31
TSKU-205ENST00000612930 SMKR1H3BMG3 65 aa13.11□□□□□ -0.31
TSKU-205ENST00000612930 FOXI2Q6ZQN5 318 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms