RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TMEM256Q8N2U0 113 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 C10orf105Q8TEF2 133 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 SMIM12Q96EX1 92 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 C7orf69Q9H7B7 122 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 TRAV8-1A0A0A6YYK1 113 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 GOSR1O95249 250 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 LTAP01374 205 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 IGLC2P0DOY2 106 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 CLEC2AQ6UVW9 174 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 TMEM18Q96B42 140 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 MLST8Q9BVC4 326 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 PRDM13Q9H4Q3 707 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 RNF24Q9Y225 148 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 CSMD2Q7Z408 3487 aa10.67□□□□□ -0.7
NEK3-205ENST00000610828 SPG11Q96JI7 2443 aa10.66□□□□□ -0.7
NEK3-205ENST00000610828 MAP1AP78559 2803 aaPredicted RBP10.66□□□□□ -0.7
NEK3-205ENST00000610828 CRISP2P16562 243 aa10.66□□□□□ -0.7
NEK3-205ENST00000610828 WDR73Q6P4I2 378 aa10.66□□□□□ -0.7
NEK3-205ENST00000610828 GOLT1AQ6ZVE7 132 aa10.66□□□□□ -0.7
NEK3-205ENST00000610828 S100A7AQ86SG5 101 aa10.66□□□□□ -0.7
NEK3-205ENST00000610828 GBGT1Q8N5D6 347 aa10.66□□□□□ -0.7
NEK3-205ENST00000610828 GRAMD2BQ96HH9 432 aa10.66□□□□□ -0.7
NEK3-205ENST00000610828 TRAV40A0A0B4J280 105 aa10.66□□□□□ -0.7
NEK3-205ENST00000610828 IZUMO1RA6ND01 250 aa10.66□□□□□ -0.7
NEK3-205ENST00000610828 SCGB2A1O75556 95 aa10.66□□□□□ -0.7
NEK3-205ENST00000610828 CTSGP08311 255 aa10.66□□□□□ -0.7
NEK3-205ENST00000610828 BRD3OSQ6XYD6 125 aa10.66□□□□□ -0.7
NEK3-205ENST00000610828 TMEM219Q86XT9 240 aa10.66□□□□□ -0.7
NEK3-205ENST00000610828 FAM110DQ8TAY7 271 aaPredicted RBP10.66□□□□□ -0.7
NEK3-205ENST00000610828 MBD6Q96DN6 1003 aa10.66□□□□□ -0.7
NEK3-205ENST00000610828 CHRDL1Q9BU40 450 aa10.66□□□□□ -0.7
NEK3-205ENST00000610828 UTP20O75691 2785 aaKnown RBP10.66□□□□□ -0.7
NEK3-205ENST00000610828 CELSR2Q9HCU4 2923 aa10.65□□□□□ -0.7
NEK3-205ENST00000610828 MYO18BQ8IUG5 2567 aa10.65□□□□□ -0.7
NEK3-205ENST00000610828 NDUFS8O00217 210 aa10.65□□□□□ -0.7
NEK3-205ENST00000610828 MT-ND6P03923 174 aa10.65□□□□□ -0.7
NEK3-205ENST00000610828 PRB1P04280 392 aa10.65□□□□□ -0.7
NEK3-205ENST00000610828 AMY1AP04745 511 aa10.65□□□□□ -0.7
NEK3-205ENST00000610828 PRB4P10163 310 aaPredicted RBP10.65□□□□□ -0.7
NEK3-205ENST00000610828 C15orf32Q32M92 178 aa10.65□□□□□ -0.7
NEK3-205ENST00000610828 LINC00322Q6ZN03 302 aaPredicted RBP10.65□□□□□ -0.7
NEK3-205ENST00000610828 TMEM136Q6ZRR5 245 aa10.65□□□□□ -0.7
NEK3-205ENST00000610828 IGHV4-30-2A0A087WSY4 118 aa10.65□□□□□ -0.71
NEK3-205ENST00000610828 TMEM238LA0A1B0GVL6 79 aa10.65□□□□□ -0.71
NEK3-205ENST00000610828 LINC01548A6NM66 108 aa10.65□□□□□ -0.71
NEK3-205ENST00000610828 MRPS12O15235 138 aaKnown RBP10.65□□□□□ -0.71
NEK3-205ENST00000610828 NUPR1O60356 82 aa10.65□□□□□ -0.71
NEK3-205ENST00000610828 FAM209BQ5JX69 171 aa10.65□□□□□ -0.71
NEK3-205ENST00000610828 SIGLEC15Q6ZMC9 328 aa10.65□□□□□ -0.71
NEK3-205ENST00000610828 PRNTQ86SH4 94 aa10.65□□□□□ -0.71
NEK3-205ENST00000610828 Q86TA4 180 aa10.65□□□□□ -0.71
NEK3-205ENST00000610828 NUP35Q8NFH5 326 aa10.65□□□□□ -0.71
NEK3-205ENST00000610828 ZNF414Q96IQ9 312 aa10.65□□□□□ -0.71
NEK3-205ENST00000610828 ZNF331Q9NQX6 463 aaPredicted RBP10.65□□□□□ -0.71
NEK3-205ENST00000610828 IGHV1-69DA0A0B4J2H0 117 aa10.64□□□□□ -0.71
NEK3-205ENST00000610828 IGHV3-35A0A0C4DH35 117 aa10.64□□□□□ -0.71
NEK3-205ENST00000610828 G3V318 75 aa10.64□□□□□ -0.71
NEK3-205ENST00000610828 IGHV1-69P01742 117 aa10.64□□□□□ -0.71
NEK3-205ENST00000610828 COX19Q49B96 90 aa10.64□□□□□ -0.71
NEK3-205ENST00000610828 ANKRD39Q53RE8 183 aa10.64□□□□□ -0.71
NEK3-205ENST00000610828 TSKUQ8WUA8 353 aa10.64□□□□□ -0.71
NEK3-205ENST00000610828 NEU1Q99519 415 aa10.64□□□□□ -0.71
NEK3-205ENST00000610828 HIGD1CA8MV81 97 aa10.63□□□□□ -0.71
NEK3-205ENST00000610828 VWC2LB2RUY7 222 aa10.63□□□□□ -0.71
NEK3-205ENST00000610828 GPR183P32249 361 aa10.63□□□□□ -0.71
NEK3-205ENST00000610828 RHOGP84095 191 aa10.63□□□□□ -0.71
NEK3-205ENST00000610828 KIAA1644Q3SXP7 199 aa10.63□□□□□ -0.71
NEK3-205ENST00000610828 C5orf56Q8N8D9 126 aa10.63□□□□□ -0.71
NEK3-205ENST00000610828 USP24Q9UPU5 2620 aa10.63□□□□□ -0.71
NEK3-205ENST00000610828 IGHV3OR16-8A0A075B7F1 116 aa10.63□□□□□ -0.71
NEK3-205ENST00000610828 IGLV2-11P01706 119 aa10.63□□□□□ -0.71
NEK3-205ENST00000610828 P01737 135 aa10.63□□□□□ -0.71
NEK3-205ENST00000610828 HLA-DQA1P01909 254 aa10.63□□□□□ -0.71
NEK3-205ENST00000610828 JOSD1Q15040 202 aaPredicted RBP10.63□□□□□ -0.71
NEK3-205ENST00000610828 LYPD1Q8N2G4 141 aa10.63□□□□□ -0.71
NEK3-205ENST00000610828 VN1R17PQ8TDU5 208 aa10.63□□□□□ -0.71
NEK3-205ENST00000610828 DAZAP1Q96EP5 407 aaKnown RBP10.63□□□□□ -0.71
NEK3-205ENST00000610828 TXN2Q99757 166 aa10.63□□□□□ -0.71
NEK3-205ENST00000610828 RPP21Q9H633 154 aaKnown RBP10.63□□□□□ -0.71
NEK3-205ENST00000610828 TP53TG3Q9ULZ0 132 aa10.63□□□□□ -0.71
NEK3-205ENST00000610828 GZMBP10144 247 aa10.62□□□□□ -0.71
NEK3-205ENST00000610828 BAGE3Q86Y29 109 aa10.62□□□□□ -0.71
NEK3-205ENST00000610828 CIARTQ8N365 385 aaPredicted RBP10.62□□□□□ -0.71
NEK3-205ENST00000610828 PRO1933Q9H354 126 aa10.62□□□□□ -0.71
NEK3-205ENST00000610828 RABAC1Q9UI14 185 aa10.62□□□□□ -0.71
NEK3-205ENST00000610828 ZFYVE26Q68DK2 2539 aa10.62□□□□□ -0.71
NEK3-205ENST00000610828 M0R3E3 92 aa10.62□□□□□ -0.71
NEK3-205ENST00000610828 Q71RC1 249 aaPredicted RBP10.62□□□□□ -0.71
NEK3-205ENST00000610828 ZNF502Q8TBZ5 544 aa10.62□□□□□ -0.71
NEK3-205ENST00000610828 NRGNQ92686 78 aa10.62□□□□□ -0.71
NEK3-205ENST00000610828 MS4A10Q96PG2 267 aa10.62□□□□□ -0.71
NEK3-205ENST00000610828 C19orf71A6NCJ1 209 aa10.61□□□□□ -0.71
NEK3-205ENST00000610828 F2Z2F3 143 aa10.61□□□□□ -0.71
NEK3-205ENST00000610828 K7EQM0 130 aa10.61□□□□□ -0.71
NEK3-205ENST00000610828 SERF1AO75920 110 aa10.61□□□□□ -0.71
NEK3-205ENST00000610828 CLEC3BP05452 202 aa10.61□□□□□ -0.71
NEK3-205ENST00000610828 IGHV4-38-2P0DP08 117 aa10.61□□□□□ -0.71
NEK3-205ENST00000610828 PDE6HQ13956 83 aa10.61□□□□□ -0.71
NEK3-205ENST00000610828 TCF24Q7RTU0 167 aa10.61□□□□□ -0.71
NEK3-205ENST00000610828 OR5R1Q8NH85 324 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms