RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 METTL26Q96S19 204 aa9.86□□□□□ -0.83
CTSA-213ENST00000606782 UBQLN2Q9UHD9 624 aa9.86□□□□□ -0.83
CTSA-213ENST00000606782 SPRY2O43597 315 aa9.85□□□□□ -0.83
CTSA-213ENST00000606782 APOHP02749 345 aaPredicted RBP9.85□□□□□ -0.83
CTSA-213ENST00000606782 HNRNPCP07910 306 aaKnown RBP eCLIP9.85□□□□□ -0.83
CTSA-213ENST00000606782 ZNF266Q14584 549 aa9.85□□□□□ -0.83
CTSA-213ENST00000606782 PATE2Q6UY27 113 aa9.85□□□□□ -0.83
CTSA-213ENST00000606782 VSIRQ9H7M9 311 aa9.85□□□□□ -0.83
CTSA-213ENST00000606782 MAP6D1Q9H9H5 199 aa9.85□□□□□ -0.83
CTSA-213ENST00000606782 RABAC1Q9UI14 185 aa9.85□□□□□ -0.83
CTSA-213ENST00000606782 A0A1W2PS18 150 aa9.84□□□□□ -0.83
CTSA-213ENST00000606782 BUB3O43684 328 aa9.84□□□□□ -0.83
CTSA-213ENST00000606782 HYPMO75409 117 aa9.84□□□□□ -0.83
CTSA-213ENST00000606782 ORM2P19652 201 aa9.84□□□□□ -0.83
CTSA-213ENST00000606782 LYZP61626 148 aa9.84□□□□□ -0.83
CTSA-213ENST00000606782 RPL7L1Q6DKI1 246 aaKnown RBP9.84□□□□□ -0.83
CTSA-213ENST00000606782 Q6ZRG5 221 aa9.84□□□□□ -0.83
CTSA-213ENST00000606782 TMUB2Q71RG4 321 aa9.84□□□□□ -0.83
CTSA-213ENST00000606782 ZNF709Q8N972 641 aa9.84□□□□□ -0.83
CTSA-213ENST00000606782 TMEM37Q8WXS4 190 aa9.84□□□□□ -0.83
CTSA-213ENST00000606782 PBDC1Q9BVG4 233 aa9.84□□□□□ -0.83
CTSA-213ENST00000606782 ARL6Q9H0F7 186 aa9.84□□□□□ -0.83
CTSA-213ENST00000606782 ARV1Q9H2C2 271 aa9.84□□□□□ -0.83
CTSA-213ENST00000606782 DNAJC4Q9NNZ3 241 aa9.84□□□□□ -0.83
CTSA-213ENST00000606782 SLC39A9Q9NUM3 307 aa9.84□□□□□ -0.83
CTSA-213ENST00000606782 ELOA3CA0A087WX78 387 aaPredicted RBP9.83□□□□□ -0.84
CTSA-213ENST00000606782 C17orf112F2Z3M2 114 aa9.83□□□□□ -0.84
CTSA-213ENST00000606782 B2MP61769 119 aa9.83□□□□□ -0.84
CTSA-213ENST00000606782 DEFB135Q30KP9 77 aa9.83□□□□□ -0.84
CTSA-213ENST00000606782 ZFP69Q49AA0 526 aa9.83□□□□□ -0.84
CTSA-213ENST00000606782 C16orf54Q6UWD8 224 aa9.83□□□□□ -0.84
CTSA-213ENST00000606782 OR1B1Q8NGR6 318 aa9.83□□□□□ -0.84
CTSA-213ENST00000606782 ST8SIA2Q92186 375 aa9.83□□□□□ -0.84
CTSA-213ENST00000606782 ARPC5LQ9BPX5 153 aa9.83□□□□□ -0.84
CTSA-213ENST00000606782 RSG1Q9BU20 258 aa9.83□□□□□ -0.84
CTSA-213ENST00000606782 TIMM9Q9Y5J7 89 aa9.83□□□□□ -0.84
CTSA-213ENST00000606782 PXMP4Q9Y6I8 212 aa9.83□□□□□ -0.84
CTSA-213ENST00000606782 IGHV3-49A0A0A0MS15 119 aa9.82□□□□□ -0.84
CTSA-213ENST00000606782 BORCS7-ASMTA0A0B4J1R7 106 aa9.82□□□□□ -0.84
CTSA-213ENST00000606782 TRAV2A0A0B4J234 112 aa9.82□□□□□ -0.84
CTSA-213ENST00000606782 A0A0J9YWU9 116 aa9.82□□□□□ -0.84
CTSA-213ENST00000606782 BCL2L11O43521 198 aa9.82□□□□□ -0.84
CTSA-213ENST00000606782 PFDN1O60925 122 aa9.82□□□□□ -0.84
CTSA-213ENST00000606782 ATP6V0CP27449 155 aa9.82□□□□□ -0.84
CTSA-213ENST00000606782 C1orf194Q5T5A4 169 aa9.82□□□□□ -0.84
CTSA-213ENST00000606782 SLC25A39Q9BZJ4 359 aaPredicted RBP9.82□□□□□ -0.84
CTSA-213ENST00000606782 TMEM231Q9H6L2 316 aa9.82□□□□□ -0.84
CTSA-213ENST00000606782 PFDN2Q9UHV9 154 aa9.82□□□□□ -0.84
CTSA-213ENST00000606782 HIGD1AQ9Y241 93 aa9.82□□□□□ -0.84
CTSA-213ENST00000606782 RFNGQ9Y644 331 aa9.82□□□□□ -0.84
CTSA-213ENST00000606782 IGHV3OR16-13A0A075B7E8 117 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 IGHV3-74A0A0B4J1X5 117 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 IGHV3-66A0A0C4DH42 116 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 ZNF98A6NK75 572 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 OR5G3P0C626 314 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 RPL35AP18077 110 aaKnown RBP9.81□□□□□ -0.84
CTSA-213ENST00000606782 S100A7P31151 101 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 PAFAH1B2P68402 229 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 TCF24Q7RTU0 167 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 S100A7AQ86SG5 101 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 APRG1Q8IVJ8 170 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 C9orf62Q8N4C0 152 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 OR1L4Q8NGR5 311 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 GATAD1Q8WUU5 269 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 GLMPQ8WWB7 406 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 NARS2Q96I59 477 aaKnown RBP9.81□□□□□ -0.84
CTSA-213ENST00000606782 PSMG3Q9BT73 122 aaPredicted RBP9.81□□□□□ -0.84
CTSA-213ENST00000606782 CSTL1Q9H114 145 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 KCNIP2Q9NS61 270 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 DOK5Q9P104 306 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 ALMS1Q8TCU4 4167 aa9.81□□□□□ -0.84
CTSA-213ENST00000606782 KANTRA0A1W2PQU2 76 aa9.8□□□□□ -0.84
CTSA-213ENST00000606782 SERF2P84101 59 aa9.8□□□□□ -0.84
CTSA-213ENST00000606782 C10orf113Q5VZT2 155 aa9.8□□□□□ -0.84
CTSA-213ENST00000606782 HSD17B11Q8NBQ5 300 aa9.8□□□□□ -0.84
CTSA-213ENST00000606782 OR2G3Q8NGZ4 309 aa9.8□□□□□ -0.84
CTSA-213ENST00000606782 GNPNAT1Q96EK6 184 aaPredicted RBP9.8□□□□□ -0.84
CTSA-213ENST00000606782 GRAMD2BQ96HH9 432 aa9.8□□□□□ -0.84
CTSA-213ENST00000606782 PFDN5Q99471 154 aa9.8□□□□□ -0.84
CTSA-213ENST00000606782 SHANK2-AS3Q9BTD1 123 aa9.8□□□□□ -0.84
CTSA-213ENST00000606782 NUPR2A6NF83 97 aa9.79□□□□□ -0.84
CTSA-213ENST00000606782 H3BRN7 92 aa9.79□□□□□ -0.84
CTSA-213ENST00000606782 COX7A2P2O60397 106 aa9.79□□□□□ -0.84
CTSA-213ENST00000606782 TFPI2P48307 235 aa9.79□□□□□ -0.84
CTSA-213ENST00000606782 ZNF124Q15973 351 aa9.79□□□□□ -0.84
CTSA-213ENST00000606782 GCSAMLQ5JQS6 135 aa9.79□□□□□ -0.84
CTSA-213ENST00000606782 FFAR4Q5NUL3 377 aa9.79□□□□□ -0.84
CTSA-213ENST00000606782 LINC00305Q7Z4B0 112 aa9.79□□□□□ -0.84
CTSA-213ENST00000606782 UHRF2Q96PU4 802 aa9.79□□□□□ -0.84
CTSA-213ENST00000606782 MS4A6AQ9H2W1 248 aa9.79□□□□□ -0.84
CTSA-213ENST00000606782 HELTA6NFD8 242 aa9.78□□□□□ -0.84
CTSA-213ENST00000606782 SPP1P10451 314 aa9.78□□□□□ -0.84
CTSA-213ENST00000606782 CEMP1Q6PRD7 247 aaPredicted RBP9.78□□□□□ -0.84
CTSA-213ENST00000606782 GBGT1Q8N5D6 347 aa9.78□□□□□ -0.84
CTSA-213ENST00000606782 LINC00476Q8WZB0 136 aa9.78□□□□□ -0.84
CTSA-213ENST00000606782 PPP1R14BQ96C90 147 aa9.78□□□□□ -0.84
CTSA-213ENST00000606782 ZNF471Q9BX82 626 aaPredicted RBP9.78□□□□□ -0.84
CTSA-213ENST00000606782 SH3BGRL3Q9H299 93 aa9.78□□□□□ -0.84
CTSA-213ENST00000606782 RNF24Q9Y225 148 aa9.78□□□□□ -0.84
CTSA-213ENST00000606782 IGKV3-7A0A075B6H7 116 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms