RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-223ENST00000604624 HEPN1Q6WQI6 88 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 C3orf56Q8N813 242 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 FAM168AQ92567 244 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 LINC00615Q96LM1 132 aaPredicted RBP3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 MRM2Q9UI43 246 aaKnown RBP3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 A6NED7 52 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 SLC25A1P53007 311 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 LINC01559Q495D7 138 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 C1orf194Q5T5A4 169 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 C7orf69Q9H7B7 122 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 PLXNA4Q9HCM2 1894 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 A0A087WWL8 130 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 TRAV14DV4A0A0A6YYC5 116 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 FXYD1O00168 92 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 UBE2V1Q13404 147 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 LILRA6Q6PI73 481 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 SEM1Q6ZVN7 128 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 RASL10AQ92737 203 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 PLXNB2O15031 1838 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 SPEM1Q8N4L4 309 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 ASCL2Q99929 193 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 WFDC6Q9BQY6 131 aa3.41□□□□□ -1.86
KCNMA1-223ENST00000604624 LMO7DNF2Z398 122 aa3.4□□□□□ -1.86
KCNMA1-223ENST00000604624 FOXH1O75593 365 aa3.4□□□□□ -1.86
KCNMA1-223ENST00000604624 ZFP2Q6ZN57 461 aa3.4□□□□□ -1.86
KCNMA1-223ENST00000604624 MCRIP2Q9BUT9 160 aaKnown RBP3.4□□□□□ -1.86
KCNMA1-223ENST00000604624 ANAPC1Q9H1A4 1944 aa3.4□□□□□ -1.86
KCNMA1-223ENST00000604624 NMBP08949 121 aa3.4□□□□□ -1.86
KCNMA1-223ENST00000604624 PRSS41Q7RTY9 318 aa3.4□□□□□ -1.86
KCNMA1-223ENST00000604624 C15orf53Q8NAA6 179 aa3.4□□□□□ -1.86
KCNMA1-223ENST00000604624 CARD19Q96LW7 228 aa3.4□□□□□ -1.86
KCNMA1-223ENST00000604624 TRGV11A0A075B6L2 103 aa3.4□□□□□ -1.86
KCNMA1-223ENST00000604624 PTP4A3O75365 173 aa3.4□□□□□ -1.86
KCNMA1-223ENST00000604624 ITLN1Q8WWA0 313 aa3.4□□□□□ -1.86
KCNMA1-223ENST00000604624 RAMP1O60894 148 aa3.4□□□□□ -1.86
KCNMA1-223ENST00000604624 ZIC1Q15915 447 aa3.4□□□□□ -1.86
KCNMA1-223ENST00000604624 F2Z2F3 143 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 LSM6P62312 80 aaKnown RBP3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 TFF3Q07654 80 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 IRF3Q14653 427 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 PCOLCEQ15113 449 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 CSTL1Q9H114 145 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 ZNF492Q9P255 531 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 TCF19Q9Y242 345 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 YBX2Q9Y2T7 364 aaKnown RBP3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 MRPS18BQ9Y676 258 aaKnown RBP3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 FAM236AA0A1B0GUQ0 79 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 FAM236BA0A1B0GV22 79 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 B9A039 149 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 USP17L23D6RBM5 183 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 DUSP15Q9H1R2 295 aaPredicted RBP3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 ANKHD1Q8IWZ3 2542 aaKnown RBP3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 TMEM131Q92545 1883 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 PRSS29PA6NIE9 313 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 J3QT63 122 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 IGHV4-59P01825 116 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 PRSS57Q6UWY2 283 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 C14orf178Q8N769 122 aaPredicted RBP3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 TSKUQ8WUA8 353 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 AQP3Q92482 292 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 A0A096LPF7 62 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 CENPVL3A0A0U1RRI6 287 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 UBE2CO00762 179 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 PPBPP02775 128 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 ATP5G3P48201 142 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 PSG4Q00888 419 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 FHL5Q5TD97 284 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 PLEKHB2Q96CS7 222 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 IGHV4-61A0A0C4DH41 118 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 TAX1BP3O14907 124 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 HIST1H2BKO60814 126 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 HIST1H2BJP06899 126 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 VSIG8P0DPA2 414 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 HIST1H2BOP23527 126 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 HIST1H2BBP33778 126 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 HIST1H2BDP58876 126 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 HIST1H2BCP62807 126 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 HIST2H2BEQ16778 126 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 SLC25A48Q6ZT89 311 aaKnown RBP3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 HIST1H2BHQ93079 126 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 HIST1H2BNQ99877 126 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 HIST1H2BMQ99879 126 aa3.4□□□□□ -1.87
KCNMA1-223ENST00000604624 A0A0A6YYD5 115 aa3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 A0A0J9YWU9 116 aa3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 LILRA5A6NI73 299 aa3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 PGLYRP1O75594 196 aaPredicted RBP3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 IFITM2Q01629 132 aa3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 RASL10BQ96S79 203 aa3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 C1QTNF4Q9BXJ3 329 aa3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 COLQQ9Y215 455 aaPredicted RBP3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 TCRBV5S2A0A599 114 aa3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 HLA-DQB1P01920 261 aa3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 CRYBA2P53672 197 aa3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 TMEM256Q8N2U0 113 aa3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 ZNF664Q8N3J9 261 aa3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 TMEM242Q9NWH2 141 aa3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 USP9YO00507 2555 aaPredicted RBP3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 GREM1O60565 184 aa3.39□□□□□ -1.87
KCNMA1-223ENST00000604624 OR9G9P0C7N8 305 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms