RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 MMP23AO75900 390 aa17.18■□□□□ 0.34
SH3D19-211ENST00000604030 SELLP14151 372 aa17.18■□□□□ 0.34
SH3D19-211ENST00000604030 ZNF415Q09FC8 603 aa17.18■□□□□ 0.34
SH3D19-211ENST00000604030 SFTA2Q6UW10 78 aa17.18■□□□□ 0.34
SH3D19-211ENST00000604030 PRDM6Q9NQX0 595 aa17.18■□□□□ 0.34
SH3D19-211ENST00000604030 CD59P13987 128 aa17.17■□□□□ 0.34
SH3D19-211ENST00000604030 METRNQ9UJH8 293 aa17.17■□□□□ 0.34
SH3D19-211ENST00000604030 FAM231DQ6ZW35 169 aa17.17■□□□□ 0.34
SH3D19-211ENST00000604030 RNF144BQ7Z419 303 aa17.17■□□□□ 0.34
SH3D19-211ENST00000604030 KLHDC3Q9BQ90 382 aa17.17■□□□□ 0.34
SH3D19-211ENST00000604030 MESP1Q9BRJ9 268 aa17.17■□□□□ 0.34
SH3D19-211ENST00000604030 A0A087X0K7 114 aa17.16■□□□□ 0.34
SH3D19-211ENST00000604030 TRAV12-3A0A0B4J271 114 aa17.16■□□□□ 0.34
SH3D19-211ENST00000604030 CD24P25063 80 aa17.16■□□□□ 0.34
SH3D19-211ENST00000604030 RPL36AP83881 106 aaKnown RBP17.16■□□□□ 0.34
SH3D19-211ENST00000604030 ZC2HC1BQ5TFG8 222 aa17.16■□□□□ 0.34
SH3D19-211ENST00000604030 RPL36ALQ969Q0 106 aaKnown RBP17.16■□□□□ 0.34
SH3D19-211ENST00000604030 YPEL3P61236 119 aaPredicted RBP17.16■□□□□ 0.34
SH3D19-211ENST00000604030 ZCCHC24Q8N2G6 241 aaKnown RBP17.16■□□□□ 0.34
SH3D19-211ENST00000604030 TMEM105Q8N8V8 129 aa17.16■□□□□ 0.34
SH3D19-211ENST00000604030 TMEM158Q8WZ71 300 aa17.16■□□□□ 0.34
SH3D19-211ENST00000604030 PRADC1Q9BSG0 188 aa17.16■□□□□ 0.34
SH3D19-211ENST00000604030 LIME1Q9H400 295 aa17.16■□□□□ 0.34
SH3D19-211ENST00000604030 RPL15P61313 204 aaKnown RBP17.16■□□□□ 0.34
SH3D19-211ENST00000604030 C3orf36Q3SXR2 165 aa17.16■□□□□ 0.34
SH3D19-211ENST00000604030 ANK1P16157 1881 aa17.16■□□□□ 0.34
SH3D19-211ENST00000604030 NDUFB8O95169 186 aa17.15■□□□□ 0.34
SH3D19-211ENST00000604030 ZNF876PQ49A33 203 aa17.15■□□□□ 0.34
SH3D19-211ENST00000604030 CHAC1Q9BUX1 264 aa17.15■□□□□ 0.34
SH3D19-211ENST00000604030 POLR3KQ9Y2Y1 108 aaPredicted RBP17.15■□□□□ 0.34
SH3D19-211ENST00000604030 NEGR1Q7Z3B1 354 aa17.15■□□□□ 0.34
SH3D19-211ENST00000604030 PHLDA1Q8WV24 401 aaPredicted RBP17.15■□□□□ 0.34
SH3D19-211ENST00000604030 DPH3Q96FX2 82 aa17.15■□□□□ 0.34
SH3D19-211ENST00000604030 XIRP1Q702N8 1843 aaKnown RBP17.15■□□□□ 0.34
SH3D19-211ENST00000604030 C9JQL5 133 aa17.14■□□□□ 0.33
SH3D19-211ENST00000604030 Q0VFX4 171 aa17.14■□□□□ 0.33
SH3D19-211ENST00000604030 RCHY1Q96PM5 261 aa17.14■□□□□ 0.33
SH3D19-211ENST00000604030 SPANXDQ9BXN6 97 aa17.14■□□□□ 0.33
SH3D19-211ENST00000604030 TMEM14BQ9NUH8 114 aa17.14■□□□□ 0.33
SH3D19-211ENST00000604030 ZNF562Q6V9R5 426 aa17.14■□□□□ 0.33
SH3D19-211ENST00000604030 MYMXA0A1B0GTQ4 84 aa17.14■□□□□ 0.33
SH3D19-211ENST00000604030 GAGE12BA1L429 117 aa17.14■□□□□ 0.33
SH3D19-211ENST00000604030 LYNX1G3V0Z9 82 aa17.14■□□□□ 0.33
SH3D19-211ENST00000604030 LYNX1P0DP58 116 aa17.14■□□□□ 0.33
SH3D19-211ENST00000604030 TMEM155Q4W5P6 130 aa17.14■□□□□ 0.33
SH3D19-211ENST00000604030 C20orf204Q6ZNR8 217 aa17.14■□□□□ 0.33
SH3D19-211ENST00000604030 C18orf32Q8TCD1 76 aa17.13■□□□□ 0.33
SH3D19-211ENST00000604030 C1orf147Q96MC9 270 aaPredicted RBP17.13■□□□□ 0.33
SH3D19-211ENST00000604030 ZSWIM8A7E2V4 1837 aa17.13■□□□□ 0.33
SH3D19-211ENST00000604030 SRRM4A7MD48 611 aaKnown RBP17.13■□□□□ 0.33
SH3D19-211ENST00000604030 CHCHD5Q9BSY4 110 aa17.13■□□□□ 0.33
SH3D19-211ENST00000604030 LINC00158P58513 81 aa17.13■□□□□ 0.33
SH3D19-211ENST00000604030 BMPERQ8N8U9 685 aa17.13■□□□□ 0.33
SH3D19-211ENST00000604030 IGKV3D-20A0A0C4DH25 116 aa17.12■□□□□ 0.33
SH3D19-211ENST00000604030 CACNA1DQ01668 2161 aa17.12■□□□□ 0.33
SH3D19-211ENST00000604030 C2orf82Q6UX34 121 aa17.12■□□□□ 0.33
SH3D19-211ENST00000604030 ESPL1Q14674 2120 aa17.12■□□□□ 0.33
SH3D19-211ENST00000604030 TRAV40A0A0B4J280 105 aa17.12■□□□□ 0.33
SH3D19-211ENST00000604030 IGKV1-6A0A0C4DH72 117 aa17.12■□□□□ 0.33
SH3D19-211ENST00000604030 PRSS46E5RG02 174 aa17.12■□□□□ 0.33
SH3D19-211ENST00000604030 DMRTC2Q8IXT2 367 aaPredicted RBP17.12■□□□□ 0.33
SH3D19-211ENST00000604030 CSTL1Q9H114 145 aa17.12■□□□□ 0.33
SH3D19-211ENST00000604030 IGHV2-5P01817 119 aa17.12■□□□□ 0.33
SH3D19-211ENST00000604030 LILRA1O75019 489 aa17.11■□□□□ 0.33
SH3D19-211ENST00000604030 SNRNP200O75643 2136 aaKnown RBP17.11■□□□□ 0.33
SH3D19-211ENST00000604030 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.11■□□□□ 0.33
SH3D19-211ENST00000604030 ZNF688P0C7X2 276 aa17.11■□□□□ 0.33
SH3D19-211ENST00000604030 AMN1Q8IY45 258 aa17.1■□□□□ 0.33
SH3D19-211ENST00000604030 PLXNA3P51805 1871 aa17.1■□□□□ 0.33
SH3D19-211ENST00000604030 LY6G5BQ8NDX9 201 aa17.1■□□□□ 0.33
SH3D19-211ENST00000604030 EREGO14944 169 aa17.1■□□□□ 0.33
SH3D19-211ENST00000604030 PAX9P55771 341 aa17.1■□□□□ 0.33
SH3D19-211ENST00000604030 CASP8AP2Q9UKL3 1982 aa17.1■□□□□ 0.33
SH3D19-211ENST00000604030 DNAJC30Q96LL9 226 aa17.09■□□□□ 0.33
SH3D19-211ENST00000604030 TNFRSF6BO95407 300 aa17.09■□□□□ 0.33
SH3D19-211ENST00000604030 GATA4P43694 442 aa17.09■□□□□ 0.33
SH3D19-211ENST00000604030 Q8TCH9 128 aa17.09■□□□□ 0.33
SH3D19-211ENST00000604030 TRBV20-1A0A075B6N2 111 aa17.09■□□□□ 0.33
SH3D19-211ENST00000604030 IGHV2-70P01814 119 aa17.08■□□□□ 0.33
SH3D19-211ENST00000604030 PRTN3P24158 256 aa17.08■□□□□ 0.33
SH3D19-211ENST00000604030 TMEM141Q96I45 108 aa17.08■□□□□ 0.33
SH3D19-211ENST00000604030 ZNF581Q9P0T4 197 aa17.08■□□□□ 0.33
SH3D19-211ENST00000604030 PRB3Q04118 309 aaPredicted RBP17.08■□□□□ 0.32
SH3D19-211ENST00000604030 Q5PR19 223 aa17.08■□□□□ 0.32
SH3D19-211ENST00000604030 FAM104BQ5XKR9 115 aa17.08■□□□□ 0.32
SH3D19-211ENST00000604030 LSM4Q9Y4Z0 139 aaKnown RBP17.08■□□□□ 0.32
SH3D19-211ENST00000604030 C11orf52Q96A22 123 aa17.08■□□□□ 0.32
SH3D19-211ENST00000604030 NDUFA4L2Q9NRX3 87 aa17.08■□□□□ 0.32
SH3D19-211ENST00000604030 Q8TAT8 98 aa17.07■□□□□ 0.32
SH3D19-211ENST00000604030 TRAV8-1A0A0A6YYK1 113 aa17.07■□□□□ 0.32
SH3D19-211ENST00000604030 CD33P20138 364 aa17.07■□□□□ 0.32
SH3D19-211ENST00000604030 TMEM249Q2WGJ8 235 aa17.07■□□□□ 0.32
SH3D19-211ENST00000604030 TIMM21Q9BVV7 248 aa17.07■□□□□ 0.32
SH3D19-211ENST00000604030 TMEM14CQ9P0S9 112 aa17.07■□□□□ 0.32
SH3D19-211ENST00000604030 TRPT1Q86TN4 253 aaKnown RBP17.07■□□□□ 0.32
SH3D19-211ENST00000604030 C1QTNF4Q9BXJ3 329 aa17.07■□□□□ 0.32
SH3D19-211ENST00000604030 A0A1W2PPI3 338 aa17.06■□□□□ 0.32
SH3D19-211ENST00000604030 LEPROTO15243 131 aa17.06■□□□□ 0.32
SH3D19-211ENST00000604030 IGLC2P0DOY2 106 aa17.06■□□□□ 0.32
SH3D19-211ENST00000604030 IGLC3P0DOY3 106 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms