RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 PSMG4Q5JS54 123 aa10.99□□□□□ -0.65
LIG1-214ENST00000597146 OR8I2Q8N0Y5 310 aa10.99□□□□□ -0.65
LIG1-214ENST00000597146 BPIFCQ8NFQ6 507 aa10.99□□□□□ -0.65
LIG1-214ENST00000597146 MITD1Q8WV92 249 aa10.99□□□□□ -0.65
LIG1-214ENST00000597146 SMIM8Q96KF7 97 aa10.99□□□□□ -0.65
LIG1-214ENST00000597146 ORM2P19652 201 aa10.98□□□□□ -0.65
LIG1-214ENST00000597146 BTCP35070 178 aa10.98□□□□□ -0.65
LIG1-214ENST00000597146 KRTAP10-2P60368 255 aa10.98□□□□□ -0.65
LIG1-214ENST00000597146 ACTL10Q5JWF8 245 aa10.98□□□□□ -0.65
LIG1-214ENST00000597146 LINC00299Q6ZSB3 139 aa10.98□□□□□ -0.65
LIG1-214ENST00000597146 OR10P1Q8NGE3 313 aa10.98□□□□□ -0.65
LIG1-214ENST00000597146 GLMPQ8WWB7 406 aa10.98□□□□□ -0.65
LIG1-214ENST00000597146 RAB40CQ96S21 281 aa10.98□□□□□ -0.65
LIG1-214ENST00000597146 NRN1Q9NPD7 142 aa10.98□□□□□ -0.65
LIG1-214ENST00000597146 NUDT15Q9NV35 164 aa10.98□□□□□ -0.65
LIG1-214ENST00000597146 IL5P05113 134 aa10.97□□□□□ -0.65
LIG1-214ENST00000597146 HTN3P15516 51 aa10.97□□□□□ -0.65
LIG1-214ENST00000597146 BCAP31P51572 246 aa10.97□□□□□ -0.65
LIG1-214ENST00000597146 C12orf45Q8N5I9 185 aaPredicted RBP10.97□□□□□ -0.65
LIG1-214ENST00000597146 ZBTB8BQ8NAP8 495 aaPredicted RBP10.97□□□□□ -0.65
LIG1-214ENST00000597146 OR4D5Q8NGN0 318 aa10.97□□□□□ -0.65
LIG1-214ENST00000597146 ZNF431Q8TF32 576 aaPredicted RBP10.97□□□□□ -0.65
LIG1-214ENST00000597146 LINC00052Q96N35 136 aa10.97□□□□□ -0.65
LIG1-214ENST00000597146 TMEM147Q9BVK8 224 aa10.97□□□□□ -0.65
LIG1-214ENST00000597146 MGAT4CQ9UBM8 478 aa10.97□□□□□ -0.65
LIG1-214ENST00000597146 IGKV1D-37A0A075B6S9 117 aa10.96□□□□□ -0.65
LIG1-214ENST00000597146 NBDYA0A0U1RRE5 68 aa10.96□□□□□ -0.65
LIG1-214ENST00000597146 EMP1P54849 157 aa10.96□□□□□ -0.65
LIG1-214ENST00000597146 NUTF2P61970 127 aaKnown RBP10.96□□□□□ -0.65
LIG1-214ENST00000597146 RRAS2P62070 204 aaPredicted RBP10.96□□□□□ -0.65
LIG1-214ENST00000597146 C1orf194Q5T5A4 169 aa10.96□□□□□ -0.65
LIG1-214ENST00000597146 S100A7AQ86SG5 101 aa10.96□□□□□ -0.65
LIG1-214ENST00000597146 THAP8Q8NA92 274 aa10.96□□□□□ -0.65
LIG1-214ENST00000597146 ENKURQ8TC29 256 aa10.96□□□□□ -0.65
LIG1-214ENST00000597146 FAM210BQ96KR6 192 aa10.96□□□□□ -0.65
LIG1-214ENST00000597146 C18orf15Q96N68 181 aa10.96□□□□□ -0.65
LIG1-214ENST00000597146 WDR12Q9GZL7 423 aaKnown RBP10.96□□□□□ -0.65
LIG1-214ENST00000597146 SLC25A22Q9H936 323 aa10.96□□□□□ -0.65
LIG1-214ENST00000597146 LSM5Q9Y4Y9 91 aaKnown RBP10.96□□□□□ -0.65
LIG1-214ENST00000597146 HMCN2Q8NDA2 5059 aa10.96□□□□□ -0.66
LIG1-214ENST00000597146 CCSO14618 274 aa10.95□□□□□ -0.66
LIG1-214ENST00000597146 METTL15P1P0C7V9 234 aa10.95□□□□□ -0.66
LIG1-214ENST00000597146 PVALBP20472 110 aaPredicted RBP10.95□□□□□ -0.66
LIG1-214ENST00000597146 GALR1P47211 349 aa10.95□□□□□ -0.66
LIG1-214ENST00000597146 Q5VSD8 79 aa10.95□□□□□ -0.66
LIG1-214ENST00000597146 ACOT7LQ6ZUV0 252 aa10.95□□□□□ -0.66
LIG1-214ENST00000597146 TMEM144Q7Z5S9 345 aa10.95□□□□□ -0.66
LIG1-214ENST00000597146 OR1B1Q8NGR6 318 aa10.95□□□□□ -0.66
LIG1-214ENST00000597146 DCANP1Q8TF63 244 aa10.95□□□□□ -0.66
LIG1-214ENST00000597146 SEC22CQ9BRL7 303 aa10.95□□□□□ -0.66
LIG1-214ENST00000597146 GPN1Q9HCN4 374 aaPredicted RBP10.95□□□□□ -0.66
LIG1-214ENST00000597146 A6NHS1 94 aa10.94□□□□□ -0.66
LIG1-214ENST00000597146 SPART-AS1P0CW21 52 aa10.94□□□□□ -0.66
LIG1-214ENST00000597146 TAS2R30P59541 319 aa10.94□□□□□ -0.66
LIG1-214ENST00000597146 RAP2BP61225 183 aa10.94□□□□□ -0.66
LIG1-214ENST00000597146 TMEM88Q6PEY1 159 aa10.94□□□□□ -0.66
LIG1-214ENST00000597146 GSG1LQ6UXU4 331 aa10.94□□□□□ -0.66
LIG1-214ENST00000597146 NPVFQ9HCQ7 196 aa10.94□□□□□ -0.66
LIG1-214ENST00000597146 SEPSECSQ9HD40 501 aaKnown RBP10.94□□□□□ -0.66
LIG1-214ENST00000597146 GOSR2O14653 212 aa10.93□□□□□ -0.66
LIG1-214ENST00000597146 TSC22D2O75157 780 aa10.93□□□□□ -0.66
LIG1-214ENST00000597146 MBPP02686 304 aaPredicted RBP10.93□□□□□ -0.66
LIG1-214ENST00000597146 OR5G3P0C626 314 aa10.93□□□□□ -0.66
LIG1-214ENST00000597146 GATA2P23769 480 aaPredicted RBP10.93□□□□□ -0.66
LIG1-214ENST00000597146 DLK1P80370 383 aa10.93□□□□□ -0.66
LIG1-214ENST00000597146 CYP2G1PQ6ZSU1 146 aa10.93□□□□□ -0.66
LIG1-214ENST00000597146 C16orf92Q96LL3 132 aa10.93□□□□□ -0.66
LIG1-214ENST00000597146 C2orf50Q96LR7 162 aa10.93□□□□□ -0.66
LIG1-214ENST00000597146 DOK5Q9P104 306 aa10.93□□□□□ -0.66
LIG1-214ENST00000597146 RCL1Q9Y2P8 373 aaKnown RBP10.93□□□□□ -0.66
LIG1-214ENST00000597146 IGKV1OR2-108A0A075B7D4 117 aa10.92□□□□□ -0.66
LIG1-214ENST00000597146 HYPMO75409 117 aa10.92□□□□□ -0.66
LIG1-214ENST00000597146 CAV2P51636 162 aa10.92□□□□□ -0.66
LIG1-214ENST00000597146 S100A10P60903 97 aa10.92□□□□□ -0.66
LIG1-214ENST00000597146 SELENOTP62341 195 aa10.92□□□□□ -0.66
LIG1-214ENST00000597146 FGL1Q08830 312 aa10.92□□□□□ -0.66
LIG1-214ENST00000597146 RAB31Q13636 194 aa10.92□□□□□ -0.66
LIG1-214ENST00000597146 SAMD13Q5VXD3 122 aa10.92□□□□□ -0.66
LIG1-214ENST00000597146 EBLN2Q6P2I7 272 aa10.92□□□□□ -0.66
LIG1-214ENST00000597146 ZNRF2Q8NHG8 242 aa10.92□□□□□ -0.66
LIG1-214ENST00000597146 RSG1Q9BU20 258 aa10.92□□□□□ -0.66
LIG1-214ENST00000597146 C1QTNF4Q9BXJ3 329 aa10.92□□□□□ -0.66
LIG1-214ENST00000597146 PTTG2Q9NZH5 202 aa10.92□□□□□ -0.66
LIG1-214ENST00000597146 XCL2Q9UBD3 114 aa10.92□□□□□ -0.66
LIG1-214ENST00000597146 ZNF98A6NK75 572 aa10.91□□□□□ -0.66
LIG1-214ENST00000597146 PRSS46E5RG02 174 aa10.91□□□□□ -0.66
LIG1-214ENST00000597146 UPK1BO75841 260 aa10.91□□□□□ -0.66
LIG1-214ENST00000597146 IGKV3-20P01619 116 aa10.91□□□□□ -0.66
LIG1-214ENST00000597146 MEOX2P50222 304 aa10.91□□□□□ -0.66
LIG1-214ENST00000597146 PAX9P55771 341 aa10.91□□□□□ -0.66
LIG1-214ENST00000597146 FAM3BP58499 235 aaPredicted RBP10.91□□□□□ -0.66
LIG1-214ENST00000597146 ASAH1Q13510 395 aa10.91□□□□□ -0.66
LIG1-214ENST00000597146 FAM222AQ5U5X8 452 aa10.91□□□□□ -0.66
LIG1-214ENST00000597146 TEPPQ6URK8 271 aa10.91□□□□□ -0.66
LIG1-214ENST00000597146 OR4B1Q8NGF8 309 aa10.91□□□□□ -0.66
LIG1-214ENST00000597146 LRRC20Q8TCA0 184 aa10.91□□□□□ -0.66
LIG1-214ENST00000597146 GPR82Q96P67 336 aa10.91□□□□□ -0.66
LIG1-214ENST00000597146 ATG101Q9BSB4 218 aa10.91□□□□□ -0.66
LIG1-214ENST00000597146 BATF3Q9NR55 127 aa10.91□□□□□ -0.66
LIG1-214ENST00000597146 SLC45A2Q9UMX9 530 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms