RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 C11orf1Q9H5F2 150 aa7.42□□□□□ -1.22
BRCA1-227ENST00000591849 ELOA3CA0A087WX78 387 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-227ENST00000591849 H3BRN7 92 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 ISLRO14498 428 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 SPP1P10451 314 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 FGF7P21781 194 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 PLP1P60201 277 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 TMEM41BQ5BJD5 291 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 C10orf113Q5VZT2 155 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 TRPT1Q86TN4 253 aaKnown RBP7.41□□□□□ -1.22
BRCA1-227ENST00000591849 ZNF709Q8N972 641 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 OR1L4Q8NGR5 311 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 OR11H2Q8NH07 326 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 GATAD1Q8WUU5 269 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 PPP1R1CQ8WVI7 109 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 UHRF2Q96PU4 802 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 MGST2Q99735 147 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 MED28Q9H204 178 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 EDA2RQ9HAV5 297 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 RPRMQ9NS64 109 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 OR5AC2Q9NZP5 309 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 WDR83OSQ9Y284 106 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 ALG5Q9Y673 324 aa7.41□□□□□ -1.22
BRCA1-227ENST00000591849 IGKV3-20P01619 116 aa7.4□□□□□ -1.22
BRCA1-227ENST00000591849 H2BFSP57053 126 aa7.4□□□□□ -1.22
BRCA1-227ENST00000591849 EWSR1Q01844 656 aaKnown RBP eCLIP7.4□□□□□ -1.22
BRCA1-227ENST00000591849 NHLH2Q02577 135 aa7.4□□□□□ -1.22
BRCA1-227ENST00000591849 CLINT1Q14677 625 aa7.4□□□□□ -1.22
BRCA1-227ENST00000591849 MIC13Q5XKP0 118 aa7.4□□□□□ -1.22
BRCA1-227ENST00000591849 LINC00305Q7Z4B0 112 aa7.4□□□□□ -1.22
BRCA1-227ENST00000591849 OR4B1Q8NGF8 309 aa7.4□□□□□ -1.22
BRCA1-227ENST00000591849 OR5C1Q8NGR4 320 aa7.4□□□□□ -1.22
BRCA1-227ENST00000591849 DNAJC4Q9NNZ3 241 aa7.4□□□□□ -1.22
BRCA1-227ENST00000591849 A0A0J9YWU9 116 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 H0YIZ8 118 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 H3BMM0 161 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 MPDU1O75352 247 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 MPC2O95563 127 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 IFNA5P01569 189 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 RPL29P47914 159 aaKnown RBP7.39□□□□□ -1.23
BRCA1-227ENST00000591849 B2MP61769 119 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 RGS21Q2M5E4 152 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 SPATA31B1PQ5VZV4 182 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 PATE2Q6UY27 113 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 FOXI2Q6ZQN5 318 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 BPIFA4PQ86YQ2 179 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 THAP6Q8TBB0 222 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 PFDN5Q99471 154 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 C1QTNF4Q9BXJ3 329 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 SLC39A9Q9NUM3 307 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 PPP1R14DQ9NXH3 145 aa7.39□□□□□ -1.23
BRCA1-227ENST00000591849 CXorf65A6NEN9 183 aa7.38□□□□□ -1.23
BRCA1-227ENST00000591849 C17orf112F2Z3M2 114 aa7.38□□□□□ -1.23
BRCA1-227ENST00000591849 HLA-DRB4P13762 266 aa7.38□□□□□ -1.23
BRCA1-227ENST00000591849 RPL12P30050 165 aaKnown RBP7.38□□□□□ -1.23
BRCA1-227ENST00000591849 OPCMLQ14982 345 aa7.38□□□□□ -1.23
BRCA1-227ENST00000591849 VWC2Q2TAL6 325 aa7.38□□□□□ -1.23
BRCA1-227ENST00000591849 CASC10Q5T4H9 136 aa7.38□□□□□ -1.23
BRCA1-227ENST00000591849 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.38□□□□□ -1.23
BRCA1-227ENST00000591849 ZNF738Q8NE65 137 aa7.38□□□□□ -1.23
BRCA1-227ENST00000591849 SCGB1C1Q8TD33 95 aa7.38□□□□□ -1.23
BRCA1-227ENST00000591849 RNF126Q9BV68 326 aa7.38□□□□□ -1.23
BRCA1-227ENST00000591849 SAV1Q9H4B6 383 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-227ENST00000591849 KCNIP2Q9NS61 270 aa7.38□□□□□ -1.23
BRCA1-227ENST00000591849 CLEC5AQ9NY25 188 aa7.38□□□□□ -1.23
BRCA1-227ENST00000591849 XCL2Q9UBD3 114 aa7.38□□□□□ -1.23
BRCA1-227ENST00000591849 PXMP4Q9Y6I8 212 aa7.38□□□□□ -1.23
BRCA1-227ENST00000591849 HLA-DRB4X5D2U9 266 aa7.38□□□□□ -1.23
BRCA1-227ENST00000591849 SOCS3O14543 225 aa7.37□□□□□ -1.23
BRCA1-227ENST00000591849 DUSP14O95147 198 aaKnown RBP7.37□□□□□ -1.23
BRCA1-227ENST00000591849 SNRPCP09234 159 aaKnown RBP7.37□□□□□ -1.23
BRCA1-227ENST00000591849 FXYD7P58549 80 aa7.37□□□□□ -1.23
BRCA1-227ENST00000591849 DEFB1P60022 68 aa7.37□□□□□ -1.23
BRCA1-227ENST00000591849 FCN2Q15485 313 aa7.37□□□□□ -1.23
BRCA1-227ENST00000591849 IGFL4Q6B9Z1 124 aa7.37□□□□□ -1.23
BRCA1-227ENST00000591849 TMEM37Q8WXS4 190 aa7.37□□□□□ -1.23
BRCA1-227ENST00000591849 ATP5SQ99766 215 aa7.37□□□□□ -1.23
BRCA1-227ENST00000591849 SMIM3Q9BZL3 60 aa7.37□□□□□ -1.23
BRCA1-227ENST00000591849 MBD2Q9UBB5 411 aa7.37□□□□□ -1.23
BRCA1-227ENST00000591849 F6UB75 175 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 C4BPBP20851 252 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 RHOBP62745 196 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 PRR20EP86478 221 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 PRR20CP86479 221 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 PRR20DP86480 221 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 PRR20BP86481 221 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 PRR20AP86496 221 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 PSG9Q00887 426 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 PMS2P11Q13670 270 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 FAM78BQ5VT40 261 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 LCN15Q6UWW0 184 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 RNF182Q8N6D2 247 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 CHAC2Q8WUX2 184 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 C20orf173Q96LM9 149 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 NPCDR1Q9BY65 106 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 HSPB11Q9Y547 144 aa7.36□□□□□ -1.23
BRCA1-227ENST00000591849 IGHV3OR16-12A0A075B7B8 117 aa7.35□□□□□ -1.23
BRCA1-227ENST00000591849 A0A087X0K7 114 aa7.35□□□□□ -1.23
BRCA1-227ENST00000591849 TRAV5A0A0B4J249 113 aa7.35□□□□□ -1.23
BRCA1-227ENST00000591849 A0A0J9YX75 114 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 189.2 ms