RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 TRAV41A0A0B4J266 112 aa8.13□□□□□ -1.11
VPS25-203ENST00000589520 ZNF320A2RRD8 509 aa8.13□□□□□ -1.11
VPS25-203ENST00000589520 F8W735 103 aaPredicted RBP8.13□□□□□ -1.11
VPS25-203ENST00000589520 K7EN84 100 aa8.13□□□□□ -1.11
VPS25-203ENST00000589520 ZNF253O75346 499 aa8.13□□□□□ -1.11
VPS25-203ENST00000589520 TCRAP04437 139 aa8.13□□□□□ -1.11
VPS25-203ENST00000589520 CTSGP08311 255 aa8.13□□□□□ -1.11
VPS25-203ENST00000589520 HOXA5P20719 270 aa8.13□□□□□ -1.11
VPS25-203ENST00000589520 RHOGP84095 191 aa8.13□□□□□ -1.11
VPS25-203ENST00000589520 RELQ04864 619 aaPredicted RBP8.13□□□□□ -1.11
VPS25-203ENST00000589520 ATP5G2Q06055 141 aa8.13□□□□□ -1.11
VPS25-203ENST00000589520 ECSCRQ19T08 205 aa8.13□□□□□ -1.11
VPS25-203ENST00000589520 C15orf32Q32M92 178 aa8.13□□□□□ -1.11
VPS25-203ENST00000589520 IBA57Q5T440 356 aaKnown RBP8.13□□□□□ -1.11
VPS25-203ENST00000589520 TEX29Q8N6K0 151 aa8.13□□□□□ -1.11
VPS25-203ENST00000589520 USMG5Q96IX5 58 aa8.13□□□□□ -1.11
VPS25-203ENST00000589520 PGPEP1LA6NFU8 196 aa8.12□□□□□ -1.11
VPS25-203ENST00000589520 IGLV2-8P01709 118 aa8.12□□□□□ -1.11
VPS25-203ENST00000589520 IGHG2P01859 326 aa8.12□□□□□ -1.11
VPS25-203ENST00000589520 TRGC1P0CF51 173 aa8.12□□□□□ -1.11
VPS25-203ENST00000589520 IGLC2P0DOY2 106 aa8.12□□□□□ -1.11
VPS25-203ENST00000589520 IGHV4-38-2P0DP08 117 aa8.12□□□□□ -1.11
VPS25-203ENST00000589520 CDX1P47902 265 aaPredicted RBP8.12□□□□□ -1.11
VPS25-203ENST00000589520 MEOX2P50222 304 aa8.12□□□□□ -1.11
VPS25-203ENST00000589520 FABP9Q0Z7S8 132 aa8.12□□□□□ -1.11
VPS25-203ENST00000589520 DEFB113Q30KQ7 82 aa8.12□□□□□ -1.11
VPS25-203ENST00000589520 SMUG1Q53HV7 270 aa8.12□□□□□ -1.11
VPS25-203ENST00000589520 OR5R1Q8NH85 324 aa8.12□□□□□ -1.11
VPS25-203ENST00000589520 MBD6Q96DN6 1003 aa8.12□□□□□ -1.11
VPS25-203ENST00000589520 AAMDCQ9H7C9 122 aa8.12□□□□□ -1.11
VPS25-203ENST00000589520 ZNF586Q9NXT0 402 aa8.12□□□□□ -1.11
VPS25-203ENST00000589520 V9GYV3 84 aa8.12□□□□□ -1.11
VPS25-203ENST00000589520 SPG11Q96JI7 2443 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 A0A096LNT2 108 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 PHOX2AO14813 284 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 MRPS12O15235 138 aaKnown RBP8.11□□□□□ -1.11
VPS25-203ENST00000589520 GATCO43716 136 aaKnown RBP8.11□□□□□ -1.11
VPS25-203ENST00000589520 HIST1H2BKO60814 126 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 MT-ND6P03923 174 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 CLEC3BP05452 202 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 HIST1H2BJP06899 126 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 MGST1P10620 155 aaKnown RBP8.11□□□□□ -1.11
VPS25-203ENST00000589520 HIST1H2BOP23527 126 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 HIST1H2BBP33778 126 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 CSN1S1P47710 185 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 AKR1D1P51857 326 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 NDUFA6P56556 154 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 HIST1H2BDP58876 126 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 HIST1H2BCP62807 126 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 HIST2H2BEQ16778 126 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 C19orf54Q5BKX5 351 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 ACTL10Q5JWF8 245 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.11□□□□□ -1.11
VPS25-203ENST00000589520 C1orf194Q5T5A4 169 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 WDR73Q6P4I2 378 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 RASL11AQ6T310 242 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 BRD3OSQ6XYD6 125 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 FRZBQ92765 325 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 HIST1H2BHQ93079 126 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 GRAMD2BQ96HH9 432 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 ZNF414Q96IQ9 312 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 HIST1H2BNQ99877 126 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 HIST1H2BMQ99879 126 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 AURKAIP1Q9NWT8 199 aaPredicted RBP8.11□□□□□ -1.11
VPS25-203ENST00000589520 ZNF492Q9P255 531 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 ZFP30Q9Y2G7 519 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 TRAPPC1Q9Y5R8 145 aa8.11□□□□□ -1.11
VPS25-203ENST00000589520 IGHV3OR16-10A0A075B7F0 116 aa8.1□□□□□ -1.11
VPS25-203ENST00000589520 FAM231BA6NCW3 169 aa8.1□□□□□ -1.11
VPS25-203ENST00000589520 OR2T8A6NH00 312 aa8.1□□□□□ -1.11
VPS25-203ENST00000589520 ZNF705GA8MUZ8 300 aaPredicted RBP8.1□□□□□ -1.11
VPS25-203ENST00000589520 H3BUX3 64 aa8.1□□□□□ -1.11
VPS25-203ENST00000589520 PLXNB1O43157 2135 aa8.1□□□□□ -1.11
VPS25-203ENST00000589520 LTAP01374 205 aa8.1□□□□□ -1.11
VPS25-203ENST00000589520 AMY1AP04745 511 aa8.1□□□□□ -1.11
VPS25-203ENST00000589520 USF2Q15853 346 aaPredicted RBP8.1□□□□□ -1.11
VPS25-203ENST00000589520 CT83Q5H943 113 aa8.1□□□□□ -1.11
VPS25-203ENST00000589520 COA6Q5JTJ3 125 aaKnown RBP8.1□□□□□ -1.11
VPS25-203ENST00000589520 C9orf139Q6ZV77 190 aa8.1□□□□□ -1.11
VPS25-203ENST00000589520 TMEM183AQ8IXX5 376 aa8.1□□□□□ -1.11
VPS25-203ENST00000589520 LINC00518Q8N0U6 118 aa8.1□□□□□ -1.11
VPS25-203ENST00000589520 TMEM75Q8N9X5 138 aa8.1□□□□□ -1.11
VPS25-203ENST00000589520 MLST8Q9BVC4 326 aa8.1□□□□□ -1.11
VPS25-203ENST00000589520 GNB1LQ9BYB4 327 aa8.1□□□□□ -1.11
VPS25-203ENST00000589520 CLEC5AQ9NY25 188 aa8.1□□□□□ -1.11
VPS25-203ENST00000589520 HIVEP1P15822 2718 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 MED13LQ71F56 2210 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 A0A0G2JLM5 398 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 SMIM27A0A1W2PRY6 76 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 A1L4Q6 167 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 TMEM89A2RUT3 159 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 G3V318 75 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 TGFAP01135 160 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 HNF1AP20823 631 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 ADMP35318 185 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 RPL15P61313 204 aaKnown RBP8.09□□□□□ -1.11
VPS25-203ENST00000589520 OR5I1Q13606 314 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 LEMD1Q68G75 181 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 SIGLEC15Q6ZMC9 328 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 OR8I2Q8N0Y5 310 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms