RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 OR1B1Q8NGR6 318 aa9.21□□□□□ -0.94
GGA3-217ENST00000583667 RNF125Q96EQ8 232 aa9.21□□□□□ -0.94
GGA3-217ENST00000583667 CCDC140Q96MF4 163 aa9.21□□□□□ -0.94
GGA3-217ENST00000583667 SHANK2-AS3Q9BTD1 123 aa9.21□□□□□ -0.94
GGA3-217ENST00000583667 OR51M1Q9H341 326 aa9.21□□□□□ -0.94
GGA3-217ENST00000583667 ZNF702PQ9H963 129 aa9.21□□□□□ -0.94
GGA3-217ENST00000583667 FAM74A7A6NL05 159 aa9.2□□□□□ -0.94
GGA3-217ENST00000583667 TGOLN2O43493 480 aa9.2□□□□□ -0.94
GGA3-217ENST00000583667 CRYBA1P05813 215 aa9.2□□□□□ -0.94
GGA3-217ENST00000583667 RAB9AP51151 201 aa9.2□□□□□ -0.94
GGA3-217ENST00000583667 MORN5Q5VZ52 161 aa9.2□□□□□ -0.94
GGA3-217ENST00000583667 FAM90A2PQ658T7 463 aa9.2□□□□□ -0.94
GGA3-217ENST00000583667 OR5AU1Q8NGC0 362 aa9.2□□□□□ -0.94
GGA3-217ENST00000583667 NOL4LQ96MY1 436 aaPredicted RBP9.2□□□□□ -0.94
GGA3-217ENST00000583667 MS4A10Q96PG2 267 aa9.2□□□□□ -0.94
GGA3-217ENST00000583667 TCEAL7Q9BRU2 100 aa9.2□□□□□ -0.94
GGA3-217ENST00000583667 CHRDL1Q9BU40 450 aa9.2□□□□□ -0.94
GGA3-217ENST00000583667 PAXXQ9BUH6 204 aa9.2□□□□□ -0.94
GGA3-217ENST00000583667 SLC25A39Q9BZJ4 359 aaPredicted RBP9.2□□□□□ -0.94
GGA3-217ENST00000583667 RNF114Q9Y508 228 aa9.2□□□□□ -0.94
GGA3-217ENST00000583667 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.19□□□□□ -0.94
GGA3-217ENST00000583667 TRAV5A0A0B4J249 113 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 OR2T8A6NH00 312 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 C11orf94C9JXX5 98 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 H3BRN7 92 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 SNAPINO95295 136 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 IL4P05112 153 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 ELANEP08246 267 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 SLC35B1P78383 322 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 RELQ04864 619 aaPredicted RBP9.19□□□□□ -0.94
GGA3-217ENST00000583667 FOXE3Q13461 319 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 KIAA0141Q14154 515 aaPredicted RBP9.19□□□□□ -0.94
GGA3-217ENST00000583667 GUCA2BQ16661 112 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 CYB561D1Q8N8Q1 229 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 MYOZ3Q8TDC0 251 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 C11orf52Q96A22 123 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 FXYD5Q96DB9 178 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 UHRF2Q96PU4 802 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 DOK5Q9P104 306 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 LINC00527Q9UJ94 153 aa9.19□□□□□ -0.94
GGA3-217ENST00000583667 OR7C2O60412 319 aa9.18□□□□□ -0.94
GGA3-217ENST00000583667 GP9P14770 177 aa9.18□□□□□ -0.94
GGA3-217ENST00000583667 GPR183P32249 361 aa9.18□□□□□ -0.94
GGA3-217ENST00000583667 PROK1P58294 105 aa9.18□□□□□ -0.94
GGA3-217ENST00000583667 TPPP2P59282 170 aa9.18□□□□□ -0.94
GGA3-217ENST00000583667 LYZP61626 148 aa9.18□□□□□ -0.94
GGA3-217ENST00000583667 USF2Q15853 346 aaPredicted RBP9.18□□□□□ -0.94
GGA3-217ENST00000583667 OXLD1Q5BKU9 147 aa9.18□□□□□ -0.94
GGA3-217ENST00000583667 TEX38Q6PEX7 206 aa9.18□□□□□ -0.94
GGA3-217ENST00000583667 TOMM20LQ6UXN7 152 aa9.18□□□□□ -0.94
GGA3-217ENST00000583667 CLEC19AQ6UXS0 136 aa9.18□□□□□ -0.94
GGA3-217ENST00000583667 IQCF2Q8IXL9 164 aa9.18□□□□□ -0.94
GGA3-217ENST00000583667 KLK15Q9H2R5 256 aa9.18□□□□□ -0.94
GGA3-217ENST00000583667 ZFAND3Q9H8U3 227 aa9.18□□□□□ -0.94
GGA3-217ENST00000583667 YTHDF2Q9Y5A9 579 aaKnown RBP9.18□□□□□ -0.94
GGA3-217ENST00000583667 PUS1Q9Y606 427 aaKnown RBP eCLIP9.18□□□□□ -0.94
GGA3-217ENST00000583667 ZNF98A6NK75 572 aa9.17□□□□□ -0.94
GGA3-217ENST00000583667 BMPR1BO00238 502 aa9.17□□□□□ -0.94
GGA3-217ENST00000583667 MRPS12O15235 138 aaKnown RBP9.17□□□□□ -0.94
GGA3-217ENST00000583667 NBEAP1P0C6P0 100 aa9.17□□□□□ -0.94
GGA3-217ENST00000583667 HIST1H1EP10412 219 aaKnown RBP9.17□□□□□ -0.94
GGA3-217ENST00000583667 PF4V1P10720 104 aa9.17□□□□□ -0.94
GGA3-217ENST00000583667 NPPCP23582 126 aa9.17□□□□□ -0.94
GGA3-217ENST00000583667 MYCNOSP40205 109 aa9.17□□□□□ -0.94
GGA3-217ENST00000583667 DEFA5Q01523 94 aa9.17□□□□□ -0.94
GGA3-217ENST00000583667 PNRC1Q12796 327 aaPredicted RBP9.17□□□□□ -0.94
GGA3-217ENST00000583667 BPIFA4PQ86YQ2 179 aa9.17□□□□□ -0.94
GGA3-217ENST00000583667 CLRN3Q8NCR9 226 aa9.17□□□□□ -0.94
GGA3-217ENST00000583667 LINC01006Q8NI28 216 aa9.17□□□□□ -0.94
GGA3-217ENST00000583667 RPUSD4Q96CM3 377 aaKnown RBP9.17□□□□□ -0.94
GGA3-217ENST00000583667 OR4F4Q96R69 305 aa9.17□□□□□ -0.94
GGA3-217ENST00000583667 SERTAD4Q9NUC0 356 aa9.17□□□□□ -0.94
GGA3-217ENST00000583667 S4R3C0 116 aa9.17□□□□□ -0.94
GGA3-217ENST00000583667 U3KQE9 123 aa9.17□□□□□ -0.94
GGA3-217ENST00000583667 B4DEV8 164 aa9.16□□□□□ -0.94
GGA3-217ENST00000583667 H3BQ15 152 aa9.16□□□□□ -0.94
GGA3-217ENST00000583667 NDUFA4O00483 81 aa9.16□□□□□ -0.94
GGA3-217ENST00000583667 IGHV3-23P01764 117 aa9.16□□□□□ -0.94
GGA3-217ENST00000583667 ATP5G3P48201 142 aa9.16□□□□□ -0.94
GGA3-217ENST00000583667 UBE2L3P68036 154 aaKnown RBP9.16□□□□□ -0.94
GGA3-217ENST00000583667 C1orf194Q5T5A4 169 aa9.16□□□□□ -0.94
GGA3-217ENST00000583667 CST9LP1Q5W188 147 aa9.16□□□□□ -0.94
GGA3-217ENST00000583667 LYPD1Q8N2G4 141 aa9.16□□□□□ -0.94
GGA3-217ENST00000583667 ARL6IP6Q8N6S5 226 aa9.16□□□□□ -0.94
GGA3-217ENST00000583667 TVP23CQ96ET8 276 aa9.16□□□□□ -0.94
GGA3-217ENST00000583667 NIPSNAP3BQ9BS92 247 aa9.16□□□□□ -0.94
GGA3-217ENST00000583667 SDF2L1Q9HCN8 221 aa9.16□□□□□ -0.94
GGA3-217ENST00000583667 RABAC1Q9UI14 185 aa9.16□□□□□ -0.94
GGA3-217ENST00000583667 IGLC2P0DOY2 106 aa9.15□□□□□ -0.94
GGA3-217ENST00000583667 PYYP10082 97 aa9.15□□□□□ -0.94
GGA3-217ENST00000583667 UBE2G2P60604 165 aa9.15□□□□□ -0.94
GGA3-217ENST00000583667 PDE6HQ13956 83 aa9.15□□□□□ -0.94
GGA3-217ENST00000583667 RHEBQ15382 184 aa9.15□□□□□ -0.94
GGA3-217ENST00000583667 ATRAIDQ6UW56 229 aa9.15□□□□□ -0.94
GGA3-217ENST00000583667 OR4X2Q8NGF9 303 aa9.15□□□□□ -0.94
GGA3-217ENST00000583667 UBE2E2Q96LR5 201 aa9.15□□□□□ -0.94
GGA3-217ENST00000583667 GPR82Q96P67 336 aa9.15□□□□□ -0.94
GGA3-217ENST00000583667 C16orf95Q9H693 158 aa9.15□□□□□ -0.94
GGA3-217ENST00000583667 NAT8Q9UHE5 227 aa9.15□□□□□ -0.94
GGA3-217ENST00000583667 ZNF727A8MUV8 499 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms