RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 CD177Q8N6Q3 437 aa12.52□□□□□ -0.41
TRAPPC8-210ENST00000582513 CXXC4Q9H2H0 198 aa12.52□□□□□ -0.41
TRAPPC8-210ENST00000582513 RAB9BQ9NP90 201 aa12.52□□□□□ -0.41
TRAPPC8-210ENST00000582513 SMIM9A6NGZ8 99 aa12.51□□□□□ -0.41
TRAPPC8-210ENST00000582513 SMAD7O15105 426 aaKnown RBP12.51□□□□□ -0.41
TRAPPC8-210ENST00000582513 FCGR3BO75015 233 aa12.51□□□□□ -0.41
TRAPPC8-210ENST00000582513 UTF1Q5T230 341 aa12.51□□□□□ -0.41
TRAPPC8-210ENST00000582513 EMP1P54849 157 aa12.51□□□□□ -0.41
TRAPPC8-210ENST00000582513 PLA2G2CQ5R387 149 aa12.51□□□□□ -0.41
TRAPPC8-210ENST00000582513 PROP1O75360 226 aa12.5□□□□□ -0.41
TRAPPC8-210ENST00000582513 SPRNQ5BIV9 151 aa12.5□□□□□ -0.41
TRAPPC8-210ENST00000582513 LEAP2Q969E1 77 aa12.5□□□□□ -0.41
TRAPPC8-210ENST00000582513 MAP1LC3AQ9H492 121 aa12.5□□□□□ -0.41
TRAPPC8-210ENST00000582513 GNG12Q9UBI6 72 aa12.5□□□□□ -0.41
TRAPPC8-210ENST00000582513 PLEKHA3Q9HB20 300 aa12.5□□□□□ -0.41
TRAPPC8-210ENST00000582513 LOC107984156A0A0G2JMH3 177 aa12.5□□□□□ -0.41
TRAPPC8-210ENST00000582513 IGKV3-15P01624 115 aa12.5□□□□□ -0.41
TRAPPC8-210ENST00000582513 WT1P19544 449 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC8-210ENST00000582513 RPL39P5Q59GN2 51 aa12.5□□□□□ -0.41
TRAPPC8-210ENST00000582513 ARL17AQ8IVW1 177 aa12.5□□□□□ -0.41
TRAPPC8-210ENST00000582513 ZADH2Q8N4Q0 377 aa12.5□□□□□ -0.41
TRAPPC8-210ENST00000582513 GTSF1Q8WW33 167 aa12.5□□□□□ -0.41
TRAPPC8-210ENST00000582513 IFITM1P13164 125 aa12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 FXYD7P58549 80 aa12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 FHL3Q13643 280 aa12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 FAM201AQ5SY85 155 aa12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 OR4X2Q8NGF9 303 aa12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 IZUMO1RA6ND01 250 aa12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 NCR2O95944 276 aa12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 SLC25A5P05141 298 aaKnown RBP12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 ZNRF1Q8ND25 227 aa12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 TIMM9Q9Y5J7 89 aa12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 TRAV3A0A0B4J244 114 aa12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 C15orf62A8K5M9 175 aa12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 RRHO14718 337 aa12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 PRDX2P32119 198 aa12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 MSMPQ1L6U9 139 aa12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 WFDC3Q8IUB2 231 aa12.49□□□□□ -0.41
TRAPPC8-210ENST00000582513 DCHS1Q96JQ0 3298 aa12.48□□□□□ -0.41
TRAPPC8-210ENST00000582513 SRSF1Q07955 248 aaKnown RBP eCLIP12.48□□□□□ -0.411e-6■■■□□ 16.6
TRAPPC8-210ENST00000582513 MIC13Q5XKP0 118 aa12.48□□□□□ -0.41
TRAPPC8-210ENST00000582513 SPINT2O43291 252 aa12.48□□□□□ -0.41
TRAPPC8-210ENST00000582513 ZNF718Q3SXZ3 478 aa12.48□□□□□ -0.41
TRAPPC8-210ENST00000582513 GDF5OSQ5U4N7 250 aa12.48□□□□□ -0.41
TRAPPC8-210ENST00000582513 TNCP24821 2201 aa12.48□□□□□ -0.41
TRAPPC8-210ENST00000582513 TNFRSF6BO95407 300 aa12.47□□□□□ -0.41
TRAPPC8-210ENST00000582513 RPL7P18124 248 aaKnown RBP12.47□□□□□ -0.41
TRAPPC8-210ENST00000582513 Q8TCH9 128 aa12.47□□□□□ -0.41
TRAPPC8-210ENST00000582513 TMUB1Q9BVT8 246 aa12.47□□□□□ -0.41
TRAPPC8-210ENST00000582513 TET2Q6N021 2002 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC8-210ENST00000582513 IGHV1-18A0A0C4DH31 117 aa12.47□□□□□ -0.41
TRAPPC8-210ENST00000582513 C15orf65H3BRN8 121 aa12.47□□□□□ -0.41
TRAPPC8-210ENST00000582513 REG1BP48304 166 aa12.47□□□□□ -0.41
TRAPPC8-210ENST00000582513 TRIP6Q15654 476 aaKnown RBP12.47□□□□□ -0.41
TRAPPC8-210ENST00000582513 CR1LQ2VPA4 569 aa12.47□□□□□ -0.41
TRAPPC8-210ENST00000582513 SPTBN2O15020 2390 aa12.47□□□□□ -0.41
TRAPPC8-210ENST00000582513 ZNF134P52741 427 aa12.47□□□□□ -0.41
TRAPPC8-210ENST00000582513 FAM162BQ5T6X4 162 aa12.47□□□□□ -0.41
TRAPPC8-210ENST00000582513 RASL11AQ6T310 242 aa12.47□□□□□ -0.41
TRAPPC8-210ENST00000582513 ABHD12Q8N2K0 398 aa12.47□□□□□ -0.41
TRAPPC8-210ENST00000582513 ARFGEF3Q5TH69 2177 aa12.46□□□□□ -0.41
TRAPPC8-210ENST00000582513 IGKV1D-17A0A075B6S4 117 aa12.46□□□□□ -0.41
TRAPPC8-210ENST00000582513 DUTP33316 252 aaKnown RBP12.46□□□□□ -0.41
TRAPPC8-210ENST00000582513 CACNG7P62955 275 aa12.46□□□□□ -0.41
TRAPPC8-210ENST00000582513 SRSF2Q01130 221 aaKnown RBP12.46□□□□□ -0.41
TRAPPC8-210ENST00000582513 OR9G4Q8NGQ1 327 aa12.46□□□□□ -0.41
TRAPPC8-210ENST00000582513 SGK494Q96LW2 274 aa12.46□□□□□ -0.41
TRAPPC8-210ENST00000582513 AGRNO00468 2067 aa12.46□□□□□ -0.41
TRAPPC8-210ENST00000582513 PTPRBP23467 1997 aa12.46□□□□□ -0.42
TRAPPC8-210ENST00000582513 LINC00694P0DN24 101 aa12.46□□□□□ -0.42
TRAPPC8-210ENST00000582513 FAM120AOSQ5T036 256 aa12.46□□□□□ -0.42
TRAPPC8-210ENST00000582513 URB1-AS1Q96HZ7 61 aa12.46□□□□□ -0.42
TRAPPC8-210ENST00000582513 OTOGLQ3ZCN5 2332 aa12.46□□□□□ -0.42
TRAPPC8-210ENST00000582513 OPRK1P41145 380 aa12.45□□□□□ -0.42
TRAPPC8-210ENST00000582513 PSMB2P49721 201 aa12.45□□□□□ -0.42
TRAPPC8-210ENST00000582513 Q8N7P7 452 aa12.45□□□□□ -0.42
TRAPPC8-210ENST00000582513 PCNX1Q96RV3 2341 aa12.45□□□□□ -0.42
TRAPPC8-210ENST00000582513 HIGD1CA8MV81 97 aa12.45□□□□□ -0.42
TRAPPC8-210ENST00000582513 IGLL5B9A064 214 aa12.45□□□□□ -0.42
TRAPPC8-210ENST00000582513 C1orf229Q6ZS94 237 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC8-210ENST00000582513 NFE4Q86UQ8 179 aa12.45□□□□□ -0.42
TRAPPC8-210ENST00000582513 IGHG3P01860 377 aa12.45□□□□□ -0.42
TRAPPC8-210ENST00000582513 ASCL5Q7RTU5 278 aa12.45□□□□□ -0.42
TRAPPC8-210ENST00000582513 RBMXL3Q8N7X1 1067 aaKnown RBP12.45□□□□□ -0.42
TRAPPC8-210ENST00000582513 NUP35Q8NFH5 326 aa12.45□□□□□ -0.42
TRAPPC8-210ENST00000582513 PRR7Q8TB68 274 aa12.45□□□□□ -0.42
TRAPPC8-210ENST00000582513 RIF1Q5UIP0 2472 aaKnown RBP12.44□□□□□ -0.42
TRAPPC8-210ENST00000582513 CRXO43186 299 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC8-210ENST00000582513 SPRY3O43610 288 aa12.44□□□□□ -0.42
TRAPPC8-210ENST00000582513 FCN3O75636 299 aa12.44□□□□□ -0.42
TRAPPC8-210ENST00000582513 DUX4L9Q6RFH8 374 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC8-210ENST00000582513 PRSS3P2Q8NHM4 247 aa12.44□□□□□ -0.42
TRAPPC8-210ENST00000582513 NRGNQ92686 78 aa12.44□□□□□ -0.42
TRAPPC8-210ENST00000582513 AJUBAQ96IF1 538 aa12.44□□□□□ -0.42
TRAPPC8-210ENST00000582513 DSCAMO60469 2012 aa12.44□□□□□ -0.42
TRAPPC8-210ENST00000582513 TRAV8-1A0A0A6YYK1 113 aa12.44□□□□□ -0.42
TRAPPC8-210ENST00000582513 LOC389332A0A1B0GUA5 103 aa12.44□□□□□ -0.42
TRAPPC8-210ENST00000582513 F5H768 121 aa12.44□□□□□ -0.42
TRAPPC8-210ENST00000582513 MYOD1P15172 320 aa12.44□□□□□ -0.42
TRAPPC8-210ENST00000582513 GCHFRP30047 84 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms