RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 CTXND1A0A1B0GTU2 59 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 MRPS12O15235 138 aaKnown RBP6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 STAG3L2P0CL84 134 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 STAG3L3P0CL85 134 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 RPL7P18124 248 aaKnown RBP6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 CD33P20138 364 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 TAS2R45P59539 299 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 IFITM2Q01629 132 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 ZNF726P1Q15940 193 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 DEFB114Q30KQ6 69 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 FAM90A2PQ658T7 463 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 LEMD1Q68G75 181 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 BPIFA4PQ86YQ2 179 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 STXBP6Q8NFX7 210 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 FAM213BQ8TBF2 198 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 LRRC20Q8TCA0 184 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 GLMPQ8WWB7 406 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 FAM167A-AS1Q96KT0 104 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 MCRIP2Q9BUT9 160 aaKnown RBP6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 SLC25A2Q9BXI2 301 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 OR51M1Q9H341 326 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 SLC25A22Q9H936 323 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 TMEM14CQ9P0S9 112 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 MLXQ9UH92 298 aa6.93□□□□□ -1.3
CDK5RAP3-220ENST00000581160 HELTA6NFD8 242 aa6.92□□□□□ -1.3
CDK5RAP3-220ENST00000581160 SAP30O75446 220 aa6.92□□□□□ -1.3
CDK5RAP3-220ENST00000581160 FHITP49789 147 aa6.92□□□□□ -1.3
CDK5RAP3-220ENST00000581160 INSL3P51460 131 aa6.92□□□□□ -1.3
CDK5RAP3-220ENST00000581160 BLOC1S1P78537 153 aa6.92□□□□□ -1.3
CDK5RAP3-220ENST00000581160 FAM74A1Q5RGS3 127 aa6.92□□□□□ -1.3
CDK5RAP3-220ENST00000581160 C9orf66Q5T8R8 295 aa6.92□□□□□ -1.3
CDK5RAP3-220ENST00000581160 PQLC2Q6ZP29 291 aa6.92□□□□□ -1.3
CDK5RAP3-220ENST00000581160 TCF24Q7RTU0 167 aa6.92□□□□□ -1.3
CDK5RAP3-220ENST00000581160 OR2K2Q8NGT1 345 aa6.92□□□□□ -1.3
CDK5RAP3-220ENST00000581160 SAT2Q96F10 170 aaPredicted RBP6.92□□□□□ -1.3
CDK5RAP3-220ENST00000581160 UBQLN2Q9UHD9 624 aa6.92□□□□□ -1.3
CDK5RAP3-220ENST00000581160 SMAD5-AS1Q9Y6J3 95 aa6.92□□□□□ -1.3
CDK5RAP3-220ENST00000581160 TRAV1-1A0A0B4J248 108 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 TRAV25A0A0B4J276 109 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 ZNF785A8K8V0 405 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 ZNF705EA8MWA4 302 aaPredicted RBP6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 HMGB3O15347 200 aaKnown RBP6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 EIF3GO75821 320 aaKnown RBP eCLIP6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 CXorf1O96002 111 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 IGLV1-51P01701 117 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 H2AFB1P0C5Y9 115 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 HIST1H1EP10412 219 aaKnown RBP6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 GALR1P47211 349 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 KHDC3LQ587J8 217 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 PRR31Q5SQ13 230 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 LCN15Q6UWW0 184 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 SIGLEC15Q6ZMC9 328 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 ZNF767PQ75MW2 155 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 SSX7Q7RTT5 188 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 SUN5Q8TC36 379 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 DYNLRB2Q8TF09 96 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 SFT2D1Q8WV19 159 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 ZNF503Q96F45 646 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 PAXXQ9BUH6 204 aa6.91□□□□□ -1.3
CDK5RAP3-220ENST00000581160 A0A087X0K7 114 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 MAP1LC3B2A6NCE7 125 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 TSPAN4O14817 238 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 OR7C2O60412 319 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 HBE1P02100 147 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 NBEAP1P0C6P0 100 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 IGLC2P0DOY2 106 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 PYYP10082 97 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 GP9P14770 177 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 MEOX2P50222 304 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 RPL11P62913 178 aaKnown RBP6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 GUK1Q16774 197 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 CD300EQ496F6 205 aaPredicted RBP6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 RBPMS2Q6ZRY4 209 aaKnown RBP6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 LYPD6BQ8NI32 183 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 FXYD5Q96DB9 178 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 C17orf77Q96MU5 243 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 GPR61Q9BZJ8 451 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 MAP1LC3BQ9GZQ8 125 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 HRH4Q9H3N8 390 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 ZNF586Q9NXT0 402 aa6.9□□□□□ -1.3
CDK5RAP3-220ENST00000581160 TRAV2A0A0B4J234 112 aa6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 H3BQ15 152 aa6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 TEX46H3BTG2 121 aa6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 WIPF1O43516 503 aa6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 ARL14EPLP0DKL9 152 aa6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 IGLL1P15814 213 aa6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 ATF4P18848 351 aaPredicted RBP6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 GCHFRP30047 84 aa6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 PSMB3P49720 205 aa6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 FGF8P55075 233 aaPredicted RBP6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 PAFAH1B2P68402 229 aa6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 PMS2P11Q13670 270 aa6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 NRN1Q9NPD7 142 aa6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 TMEM167BQ9NRX6 74 aa6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 SELENOKQ9Y6D0 94 aa6.89□□□□□ -1.31
CDK5RAP3-220ENST00000581160 TRBV19A0A075B6N1 114 aa6.88□□□□□ -1.31
CDK5RAP3-220ENST00000581160 IZUMO1RA6ND01 250 aa6.88□□□□□ -1.31
CDK5RAP3-220ENST00000581160 DNASE2O00115 360 aaPredicted RBP6.88□□□□□ -1.31
CDK5RAP3-220ENST00000581160 RGS13O14921 159 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms