RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 Q9H3A6 140 aa11.46□□□□□ -0.58
CDK5RAP3-218ENST00000580391 YAE1D1Q9NRH1 226 aa11.46□□□□□ -0.58
CDK5RAP3-218ENST00000580391 COLCA2A8K830 154 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 ARL3P36405 182 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 RPL15P61313 204 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 OR4F17Q8NGA8 305 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 USMG5Q96IX5 58 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 C17orf77Q96MU5 243 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 ATP6V0BQ99437 205 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 PRSS22Q9GZN4 317 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 TUBA4BQ9H853 241 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 NOTCH2Q04721 2471 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 CLPSL1A2RUU4 121 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 PGPA6NDG6 321 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 PEX7O00628 323 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 SLC25A5P05141 298 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 RAB9AP51151 201 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 CENPWQ5EE01 88 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 S100A7AQ86SG5 101 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 C15orf54Q8N8G6 183 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 RPH3ALQ9UNE2 315 aa11.45□□□□□ -0.58
CDK5RAP3-218ENST00000580391 CUBNO60494 3623 aa11.44□□□□□ -0.58
CDK5RAP3-218ENST00000580391 TRBV19A0A075B6N1 114 aa11.44□□□□□ -0.58
CDK5RAP3-218ENST00000580391 C9JCJ5 164 aa11.44□□□□□ -0.58
CDK5RAP3-218ENST00000580391 SLC17A3O00476 420 aa11.44□□□□□ -0.58
CDK5RAP3-218ENST00000580391 IGHG4P01861 327 aa11.44□□□□□ -0.58
CDK5RAP3-218ENST00000580391 RELQ04864 619 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-218ENST00000580391 FAM24BQ8N5W8 94 aa11.44□□□□□ -0.58
CDK5RAP3-218ENST00000580391 HIST1H2BAQ96A08 127 aa11.44□□□□□ -0.58
CDK5RAP3-218ENST00000580391 LINC00479Q96M42 142 aa11.44□□□□□ -0.58
CDK5RAP3-218ENST00000580391 YPEL4Q96NS1 127 aa11.44□□□□□ -0.58
CDK5RAP3-218ENST00000580391 PRELID1Q9Y255 219 aa11.44□□□□□ -0.58
CDK5RAP3-218ENST00000580391 MTORP42345 2549 aa11.44□□□□□ -0.58
CDK5RAP3-218ENST00000580391 HELTA6NFD8 242 aa11.43□□□□□ -0.58
CDK5RAP3-218ENST00000580391 PSMB8P28062 276 aa11.43□□□□□ -0.58
CDK5RAP3-218ENST00000580391 EXOC3-AS1Q8N2X6 119 aa11.43□□□□□ -0.58
CDK5RAP3-218ENST00000580391 OCC1Q8TAD7 63 aa11.43□□□□□ -0.58
CDK5RAP3-218ENST00000580391 URGCP-MRPS24S4R325 110 aa11.43□□□□□ -0.58
CDK5RAP3-218ENST00000580391 OTOGQ6ZRI0 2925 aa11.43□□□□□ -0.58
CDK5RAP3-218ENST00000580391 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-218ENST00000580391 K7EN84 100 aa11.43□□□□□ -0.58
CDK5RAP3-218ENST00000580391 ZNF207O43670 478 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-218ENST00000580391 GNG4P50150 75 aa11.43□□□□□ -0.58
CDK5RAP3-218ENST00000580391 OR4X2Q8NGF9 303 aa11.43□□□□□ -0.58
CDK5RAP3-218ENST00000580391 IGF2BP2-AS1Q96M15 143 aa11.43□□□□□ -0.58
CDK5RAP3-218ENST00000580391 EPDR1Q9UM22 224 aa11.43□□□□□ -0.58
CDK5RAP3-218ENST00000580391 TRAV34A0A0B4J273 112 aa11.42□□□□□ -0.58
CDK5RAP3-218ENST00000580391 MT-ND4LP03901 98 aa11.42□□□□□ -0.58
CDK5RAP3-218ENST00000580391 SIGLEC15Q6ZMC9 328 aa11.42□□□□□ -0.58
CDK5RAP3-218ENST00000580391 C5orf17Q8NAS9 161 aa11.42□□□□□ -0.58
CDK5RAP3-218ENST00000580391 OTORQ9NRC9 128 aa11.42□□□□□ -0.58
CDK5RAP3-218ENST00000580391 IGHV3OR16-13A0A075B7E8 117 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 IGHV3-74A0A0B4J1X5 117 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 IGHV3-66A0A0C4DH42 116 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 A0A0G2JLM5 398 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 DNAJC9-AS1A6NH13 148 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 CLDN34H7C241 214 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 RPL7P18124 248 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 CNN1P51911 297 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 OR8I2Q8N0Y5 310 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 OR5B12Q96R08 314 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 SMR3AQ99954 134 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 TCEAL7Q9BRU2 100 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 CTDSP1Q9GZU7 261 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 BAHCC1Q9P281 2608 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 IGHV3-49A0A0A0MS15 119 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 H7BYZ3 331 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 ISLRO14498 428 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 APOHP02749 345 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 ELOBQ15370 118 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 UNQ9165/PRO28630Q6UXU0 137 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 TMEM242Q9NWH2 141 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 CDC42EP3Q9UKI2 254 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 SMAD5-AS1Q9Y6J3 95 aa11.41□□□□□ -0.58
CDK5RAP3-218ENST00000580391 CXorf65A6NEN9 183 aa11.4□□□□□ -0.58
CDK5RAP3-218ENST00000580391 BUB3O43684 328 aa11.4□□□□□ -0.58
CDK5RAP3-218ENST00000580391 IGLV2-8P01709 118 aa11.4□□□□□ -0.58
CDK5RAP3-218ENST00000580391 PRB4P10163 310 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-218ENST00000580391 TMEM86BQ8N661 226 aa11.4□□□□□ -0.58
CDK5RAP3-218ENST00000580391 NHLRC2Q8NBF2 726 aa11.4□□□□□ -0.58
CDK5RAP3-218ENST00000580391 SGK494Q96LW2 274 aa11.4□□□□□ -0.58
CDK5RAP3-218ENST00000580391 METTL26Q96S19 204 aa11.4□□□□□ -0.58
CDK5RAP3-218ENST00000580391 ATG101Q9BSB4 218 aa11.4□□□□□ -0.58
CDK5RAP3-218ENST00000580391 ESM1Q9NQ30 184 aa11.4□□□□□ -0.58
CDK5RAP3-218ENST00000580391 RNF24Q9Y225 148 aa11.4□□□□□ -0.58
CDK5RAP3-218ENST00000580391 LY96Q9Y6Y9 160 aa11.4□□□□□ -0.58
CDK5RAP3-218ENST00000580391 TCRAP04437 139 aa11.39□□□□□ -0.59
CDK5RAP3-218ENST00000580391 RPLP1P05386 114 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-218ENST00000580391 CXCL1P09341 107 aa11.39□□□□□ -0.59
CDK5RAP3-218ENST00000580391 ATF4P18848 351 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-218ENST00000580391 OR5I1Q13606 314 aa11.39□□□□□ -0.59
CDK5RAP3-218ENST00000580391 TEX38Q6PEX7 206 aa11.39□□□□□ -0.59
CDK5RAP3-218ENST00000580391 Q8N2B8 174 aa11.39□□□□□ -0.59
CDK5RAP3-218ENST00000580391 SFRP2Q96HF1 295 aa11.39□□□□□ -0.59
CDK5RAP3-218ENST00000580391 TGIF2-C20orf24A0A0A6YYL0 155 aa11.39□□□□□ -0.59
CDK5RAP3-218ENST00000580391 TMEM89A2RUT3 159 aa11.39□□□□□ -0.59
CDK5RAP3-218ENST00000580391 NDUFA4O00483 81 aa11.39□□□□□ -0.59
CDK5RAP3-218ENST00000580391 TAS2R60P59551 318 aa11.39□□□□□ -0.59
CDK5RAP3-218ENST00000580391 PDE6HQ13956 83 aa11.39□□□□□ -0.59
CDK5RAP3-218ENST00000580391 ANAPC16Q96DE5 110 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms