RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 DOK5Q9P104 306 aa16.61■□□□□ 0.25
VAPA-205ENST00000578314 HIGD1AQ9Y241 93 aa16.61■□□□□ 0.25
VAPA-205ENST00000578314 C5orf51A6NDU8 294 aa16.6■□□□□ 0.25
VAPA-205ENST00000578314 RAP2BP61225 183 aa16.6■□□□□ 0.25
VAPA-205ENST00000578314 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.6■□□□□ 0.25
VAPA-205ENST00000578314 C20orf173Q96LM9 149 aa16.6■□□□□ 0.25
VAPA-205ENST00000578314 C2orf50Q96LR7 162 aa16.6■□□□□ 0.25
VAPA-205ENST00000578314 SCRT1Q9BWW7 348 aa16.6■□□□□ 0.25
VAPA-205ENST00000578314 RPRMQ9NS64 109 aa16.6■□□□□ 0.25
VAPA-205ENST00000578314 ELOA3CA0A087WX78 387 aaPredicted RBP16.59■□□□□ 0.25
VAPA-205ENST00000578314 L7N2F9 121 aa16.59■□□□□ 0.25
VAPA-205ENST00000578314 VAMP2P63027 116 aa16.59■□□□□ 0.25
VAPA-205ENST00000578314 IL15RAQ13261 267 aa16.59■□□□□ 0.25
VAPA-205ENST00000578314 EBLN2Q6P2I7 272 aa16.59■□□□□ 0.25
VAPA-205ENST00000578314 C11orf1Q9H5F2 150 aa16.59■□□□□ 0.25
VAPA-205ENST00000578314 A0A0J9YX75 114 aa16.58■□□□□ 0.24
VAPA-205ENST00000578314 LY6G6CO95867 125 aa16.58■□□□□ 0.24
VAPA-205ENST00000578314 IGKV3-20P01619 116 aa16.58■□□□□ 0.24
VAPA-205ENST00000578314 ZNF705AQ6ZN79 300 aaPredicted RBP16.58■□□□□ 0.24
VAPA-205ENST00000578314 S100A7AQ86SG5 101 aa16.58■□□□□ 0.24
VAPA-205ENST00000578314 ZNF709Q8N972 641 aa16.58■□□□□ 0.24
VAPA-205ENST00000578314 LSM5Q9Y4Y9 91 aaKnown RBP16.58■□□□□ 0.24
VAPA-205ENST00000578314 F6UB75 175 aa16.57■□□□□ 0.24
VAPA-205ENST00000578314 OR5G3P0C626 314 aa16.57■□□□□ 0.24
VAPA-205ENST00000578314 RPL7P18124 248 aaKnown RBP16.57■□□□□ 0.24
VAPA-205ENST00000578314 SLC38A11Q08AI6 406 aa16.57■□□□□ 0.24
VAPA-205ENST00000578314 PXDC1Q5TGL8 231 aa16.57■□□□□ 0.24
VAPA-205ENST00000578314 FAM78BQ5VT40 261 aa16.57■□□□□ 0.24
VAPA-205ENST00000578314 PATE2Q6UY27 113 aa16.57■□□□□ 0.24
VAPA-205ENST00000578314 OR4B1Q8NGF8 309 aa16.57■□□□□ 0.24
VAPA-205ENST00000578314 NEU1Q99519 415 aa16.57■□□□□ 0.24
VAPA-205ENST00000578314 C11orf94C9JXX5 98 aa16.56■□□□□ 0.24
VAPA-205ENST00000578314 AGPAT2O15120 278 aa16.56■□□□□ 0.24
VAPA-205ENST00000578314 UPK1BO75841 260 aa16.56■□□□□ 0.24
VAPA-205ENST00000578314 PSG9Q00887 426 aa16.56■□□□□ 0.24
VAPA-205ENST00000578314 ZNF546Q86UE3 836 aa16.56■□□□□ 0.24
VAPA-205ENST00000578314 UHRF2Q96PU4 802 aa16.56■□□□□ 0.24
VAPA-205ENST00000578314 ARL6Q9H0F7 186 aa16.56■□□□□ 0.24
VAPA-205ENST00000578314 PTTG2Q9NZH5 202 aa16.56■□□□□ 0.24
VAPA-205ENST00000578314 TRAV8-2A0A0B4J237 113 aa16.55■□□□□ 0.24
VAPA-205ENST00000578314 A8MTW9 85 aa16.55■□□□□ 0.24
VAPA-205ENST00000578314 ZNF705FA8MVS1 300 aaPredicted RBP16.55■□□□□ 0.24
VAPA-205ENST00000578314 GOSR2O14653 212 aa16.55■□□□□ 0.24
VAPA-205ENST00000578314 ZNF705DP0CH99 300 aaPredicted RBP16.55■□□□□ 0.24
VAPA-205ENST00000578314 ZNF705BP0CI00 300 aaPredicted RBP16.55■□□□□ 0.24
VAPA-205ENST00000578314 BCAP31P51572 246 aa16.55■□□□□ 0.24
VAPA-205ENST00000578314 ARV1Q9H2C2 271 aa16.55■□□□□ 0.24
VAPA-205ENST00000578314 RNF24Q9Y225 148 aa16.55■□□□□ 0.24
VAPA-205ENST00000578314 FAM24AA6NFZ4 105 aa16.54■□□□□ 0.24
VAPA-205ENST00000578314 SMIM9A6NGZ8 99 aa16.54■□□□□ 0.24
VAPA-205ENST00000578314 PVALBP20472 110 aaPredicted RBP16.54■□□□□ 0.24
VAPA-205ENST00000578314 HLA-DMBP28068 263 aa16.54■□□□□ 0.24
VAPA-205ENST00000578314 CAV2P51636 162 aa16.54■□□□□ 0.24
VAPA-205ENST00000578314 FXYD7P58549 80 aa16.54■□□□□ 0.24
VAPA-205ENST00000578314 IFITM3Q01628 133 aa16.54■□□□□ 0.24
VAPA-205ENST00000578314 C2CD4CQ8TF44 421 aa16.54■□□□□ 0.24
VAPA-205ENST00000578314 SLC35B3Q9H1N7 401 aa16.54■□□□□ 0.24
VAPA-205ENST00000578314 A0A087X0K7 114 aa16.53■□□□□ 0.24
VAPA-205ENST00000578314 TCTAP57738 103 aa16.53■□□□□ 0.24
VAPA-205ENST00000578314 MGST2Q99735 147 aa16.53■□□□□ 0.24
VAPA-205ENST00000578314 LYRM2Q9NU23 88 aaPredicted RBP16.53■□□□□ 0.24
VAPA-205ENST00000578314 CST7O76096 145 aa16.52■□□□□ 0.24
VAPA-205ENST00000578314 FGL1Q08830 312 aa16.52■□□□□ 0.24
VAPA-205ENST00000578314 RAB32Q13637 225 aa16.52■□□□□ 0.24
VAPA-205ENST00000578314 IGFL4Q6B9Z1 124 aa16.52■□□□□ 0.24
VAPA-205ENST00000578314 LGALS9CQ6DKI2 356 aa16.52■□□□□ 0.24
VAPA-205ENST00000578314 AMTNQ6UX39 209 aa16.52■□□□□ 0.24
VAPA-205ENST00000578314 ENKURQ8TC29 256 aa16.52■□□□□ 0.24
VAPA-205ENST00000578314 MRPS12O15235 138 aaKnown RBP16.51■□□□□ 0.23
VAPA-205ENST00000578314 S100A10P60903 97 aa16.51■□□□□ 0.23
VAPA-205ENST00000578314 VWC2Q2TAL6 325 aa16.51■□□□□ 0.23
VAPA-205ENST00000578314 Q6ZTC4 211 aa16.51■□□□□ 0.23
VAPA-205ENST00000578314 RNF182Q8N6D2 247 aa16.51■□□□□ 0.23
VAPA-205ENST00000578314 GPN1Q9HCN4 374 aaPredicted RBP16.51■□□□□ 0.23
VAPA-205ENST00000578314 CELA1Q9UNI1 258 aa16.51■□□□□ 0.23
VAPA-205ENST00000578314 DUSP14O95147 198 aaKnown RBP16.5■□□□□ 0.23
VAPA-205ENST00000578314 S100A11P31949 105 aa16.5■□□□□ 0.23
VAPA-205ENST00000578314 CAMLGP49069 296 aa16.5■□□□□ 0.23
VAPA-205ENST00000578314 SULT1A1P50225 295 aa16.5■□□□□ 0.23
VAPA-205ENST00000578314 RAB31Q13636 194 aa16.5■□□□□ 0.23
VAPA-205ENST00000578314 C12orf74Q32Q52 190 aa16.5■□□□□ 0.23
VAPA-205ENST00000578314 LINC00305Q7Z4B0 112 aa16.5■□□□□ 0.23
VAPA-205ENST00000578314 TMEM252Q8N6L7 170 aa16.5■□□□□ 0.23
VAPA-205ENST00000578314 TMEM37Q8WXS4 190 aa16.5■□□□□ 0.23
VAPA-205ENST00000578314 UQCC1Q9NVA1 299 aa16.5■□□□□ 0.23
VAPA-205ENST00000578314 WDR83OSQ9Y284 106 aa16.5■□□□□ 0.23
VAPA-205ENST00000578314 TRAV10A0A0B4J240 114 aa16.49■□□□□ 0.23
VAPA-205ENST00000578314 CXCL3P19876 107 aa16.49■□□□□ 0.23
VAPA-205ENST00000578314 CNN1P51911 297 aaKnown RBP16.49■□□□□ 0.23
VAPA-205ENST00000578314 C1orf158Q8N1D5 194 aa16.49■□□□□ 0.23
VAPA-205ENST00000578314 GOLT1BQ9Y3E0 138 aa16.49■□□□□ 0.23
VAPA-205ENST00000578314 KMT2AQ03164 3969 aa16.49■□□□□ 0.23
VAPA-205ENST00000578314 IGHV3OR16-12A0A075B7B8 117 aa16.48■□□□□ 0.23
VAPA-205ENST00000578314 IGSF23A1L1A6 192 aa16.48■□□□□ 0.23
VAPA-205ENST00000578314 TMEM189A5PLL7 270 aa16.48■□□□□ 0.23
VAPA-205ENST00000578314 NRARPQ7Z6K4 114 aa16.48■□□□□ 0.23
VAPA-205ENST00000578314 DNAJC4Q9NNZ3 241 aa16.48■□□□□ 0.23
VAPA-205ENST00000578314 APLNQ9ULZ1 77 aa16.48■□□□□ 0.23
VAPA-205ENST00000578314 RFNGQ9Y644 331 aa16.48■□□□□ 0.23
VAPA-205ENST00000578314 IGLL5B9A064 214 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms