RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 S100A16Q96FQ6 103 aaKnown RBP3.67□□□□□ -1.82
BRIP1-202ENST00000577598 C16orf95Q9H693 158 aa3.67□□□□□ -1.82
BRIP1-202ENST00000577598 ABCC10Q5T3U5 1492 aa3.67□□□□□ -1.82
BRIP1-202ENST00000577598 FRMPD3Q5JV73 1810 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 TNCP24821 2201 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 TRBV6-6A0A0A6YYG2 114 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 LOC107986453A0A1B0GWG9 222 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 PDCD5O14737 125 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 APODP05090 189 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 ZNF22P17026 224 aaPredicted RBP3.66□□□□□ -1.82
BRIP1-202ENST00000577598 PSMB8P28062 276 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 PLGLB1Q02325 96 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 C1orf134Q5TEV5 83 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 NHP2Q9NX24 153 aaKnown RBP3.66□□□□□ -1.82
BRIP1-202ENST00000577598 NCAPD3P42695 1498 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 TICRRQ7Z2Z1 1910 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 SSH2Q76I76 1423 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 YEATS2Q9ULM3 1422 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 IGHV3OR15-7A0A075B7D8 119 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 CYB5AP00167 134 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 ADIRFQ15847 76 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 CAMK2N1Q7Z7J9 78 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 KIF13BQ9NQT8 1826 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 ALPK2Q86TB3 2170 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 UQCRQO14949 82 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 PROSCO94903 275 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 RNASE2P10153 161 aaKnown RBP3.66□□□□□ -1.82
BRIP1-202ENST00000577598 TMEM155Q4W5P6 130 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 C7orf65Q6ZTY9 151 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 PRR15Q8IV56 129 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 POM121L12Q8N7R1 296 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 NAA60Q9H7X0 242 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 LINC00574Q9H8X3 128 aa3.66□□□□□ -1.82
BRIP1-202ENST00000577598 IGKV3D-20A0A0C4DH25 116 aa3.65□□□□□ -1.82
BRIP1-202ENST00000577598 GNRH2O43555 120 aa3.65□□□□□ -1.82
BRIP1-202ENST00000577598 ZNF117Q03924 483 aa3.65□□□□□ -1.82
BRIP1-202ENST00000577598 MORN2Q502X0 79 aa3.65□□□□□ -1.82
BRIP1-202ENST00000577598 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.65□□□□□ -1.822e-7■■■■■ 82.4
BRIP1-202ENST00000577598 TMEM136Q6ZRR5 245 aa3.65□□□□□ -1.82
BRIP1-202ENST00000577598 NPBQ8NG41 125 aa3.65□□□□□ -1.82
BRIP1-202ENST00000577598 UPK3BQ9BT76 320 aa3.65□□□□□ -1.82
BRIP1-202ENST00000577598 ZNF355PQ9NSJ1 428 aa3.65□□□□□ -1.82
BRIP1-202ENST00000577598 COL6A6A6NMZ7 2263 aa3.65□□□□□ -1.82
BRIP1-202ENST00000577598 EEA1Q15075 1411 aa3.65□□□□□ -1.83
BRIP1-202ENST00000577598 IGHV3-21A0A0B4J1V1 117 aa3.65□□□□□ -1.83
BRIP1-202ENST00000577598 RPL36A-HNRNPH2H7BZ11 118 aa3.65□□□□□ -1.83
BRIP1-202ENST00000577598 H7C423 109 aa3.65□□□□□ -1.83
BRIP1-202ENST00000577598 LINC01565O15544 149 aa3.65□□□□□ -1.83
BRIP1-202ENST00000577598 LINC00032P0C843 101 aa3.65□□□□□ -1.83
BRIP1-202ENST00000577598 ESRGQ1W209 222 aa3.65□□□□□ -1.83
BRIP1-202ENST00000577598 H2AFVQ71UI9 128 aa3.65□□□□□ -1.83
BRIP1-202ENST00000577598 MYH9P35579 1960 aaKnown RBP3.65□□□□□ -1.83
BRIP1-202ENST00000577598 CREBBPQ92793 2442 aa3.65□□□□□ -1.83
BRIP1-202ENST00000577598 IGHV1-46P01743 117 aa3.65□□□□□ -1.83
BRIP1-202ENST00000577598 C9orf129Q5T035 196 aaKnown RBP3.65□□□□□ -1.83
BRIP1-202ENST00000577598 OR2T2Q6IF00 324 aa3.65□□□□□ -1.83
BRIP1-202ENST00000577598 OR5AS1Q8N127 324 aa3.65□□□□□ -1.83
BRIP1-202ENST00000577598 FAM216BQ8N7L0 139 aa3.65□□□□□ -1.83
BRIP1-202ENST00000577598 DOCK11Q5JSL3 2073 aa3.65□□□□□ -1.83
BRIP1-202ENST00000577598 CDK5RAP2Q96SN8 1893 aa3.64□□□□□ -1.83
BRIP1-202ENST00000577598 IGKV2D-26A0A0A0MRZ7 120 aa3.64□□□□□ -1.83
BRIP1-202ENST00000577598 RBAKDNA6NC62 111 aa3.64□□□□□ -1.83
BRIP1-202ENST00000577598 CSRP1P21291 193 aaKnown RBP3.64□□□□□ -1.83
BRIP1-202ENST00000577598 NPPCP23582 126 aa3.64□□□□□ -1.83
BRIP1-202ENST00000577598 S100ZQ8WXG8 99 aa3.64□□□□□ -1.83
BRIP1-202ENST00000577598 IGLV11-55A0A075B6I3 123 aa3.64□□□□□ -1.83
BRIP1-202ENST00000577598 TRAV12-2A0A075B6T6 113 aa3.64□□□□□ -1.83
BRIP1-202ENST00000577598 A0A0J9YWU9 116 aa3.64□□□□□ -1.83
BRIP1-202ENST00000577598 DNAL4O96015 105 aa3.64□□□□□ -1.83
BRIP1-202ENST00000577598 SNRNP25Q9BV90 132 aaKnown RBP3.64□□□□□ -1.83
BRIP1-202ENST00000577598 GPATCH8Q9UKJ3 1502 aaKnown RBP3.64□□□□□ -1.83
BRIP1-202ENST00000577598 KTN1Q86UP2 1357 aaKnown RBP3.63□□□□□ -1.83
BRIP1-202ENST00000577598 TRAV23DV6A0A075B6W5 121 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 IL4P05112 153 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 CCL3P10147 92 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 YPEL2Q96QA6 119 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 AGPAT4-IT1Q9H0P7 198 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 POGZQ7Z3K3 1410 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 EBI3Q14213 229 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 NOTCH2NLQ7Z3S9 236 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 MROH2BQ7Z745 1585 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 EML6Q6ZMW3 1958 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 ICE1Q9Y2F5 2266 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 THSD7BQ9C0I4 1608 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 WIZO95785 1651 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 CYSRT1A8MQ03 144 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 B4DSR2 109 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 C3orf84H3BNL1 204 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 FGF12P61328 243 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 KRTAP3-1Q9BYR8 98 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 BIVM-ERCC5R4GMW8 1640 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 PCNX2A6NKB5 2137 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 KIAA1549Q9HCM3 1950 aa3.63□□□□□ -1.83
BRIP1-202ENST00000577598 TNS2Q63HR2 1409 aa3.62□□□□□ -1.83
BRIP1-202ENST00000577598 ERHP84090 104 aaKnown RBP3.62□□□□□ -1.83
BRIP1-202ENST00000577598 ETDBQ3ZM63 59 aa3.62□□□□□ -1.83
BRIP1-202ENST00000577598 LYPD2Q6UXB3 125 aa3.62□□□□□ -1.83
BRIP1-202ENST00000577598 PLEKHH2Q8IVE3 1493 aa3.62□□□□□ -1.83
BRIP1-202ENST00000577598 ARHGAP21Q5T5U3 1957 aa3.62□□□□□ -1.83
BRIP1-202ENST00000577598 SMIM31A0A1B0GVY4 71 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms