RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 RCL1Q9Y2P8 373 aaKnown RBP11.24□□□□□ -0.61
SF3B3-215ENST00000577085 LSM5Q9Y4Y9 91 aaKnown RBP11.24□□□□□ -0.61
SF3B3-215ENST00000577085 HYDINQ4G0P3 5121 aa11.23□□□□□ -0.61
SF3B3-215ENST00000577085 C7orf66A4D0T2 115 aa11.23□□□□□ -0.61
SF3B3-215ENST00000577085 PMS2P5A8MQ11 134 aa11.23□□□□□ -0.61
SF3B3-215ENST00000577085 CCNKO75909 580 aa11.23□□□□□ -0.61
SF3B3-215ENST00000577085 RPL7P18124 248 aaKnown RBP11.23□□□□□ -0.61
SF3B3-215ENST00000577085 HLA-DMBP28068 263 aa11.23□□□□□ -0.61
SF3B3-215ENST00000577085 CAV2P51636 162 aa11.23□□□□□ -0.61
SF3B3-215ENST00000577085 PSG9Q00887 426 aa11.23□□□□□ -0.61
SF3B3-215ENST00000577085 SLC38A11Q08AI6 406 aa11.23□□□□□ -0.61
SF3B3-215ENST00000577085 FAM78BQ5VT40 261 aa11.23□□□□□ -0.61
SF3B3-215ENST00000577085 GSG1LQ6UXU4 331 aa11.23□□□□□ -0.61
SF3B3-215ENST00000577085 ZNF546Q86UE3 836 aa11.23□□□□□ -0.61
SF3B3-215ENST00000577085 C12orf45Q8N5I9 185 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-215ENST00000577085 LRRC20Q8TCA0 184 aa11.23□□□□□ -0.61
SF3B3-215ENST00000577085 GGACTQ9BVM4 153 aa11.23□□□□□ -0.61
SF3B3-215ENST00000577085 AGRNO00468 2067 aa11.23□□□□□ -0.61
SF3B3-215ENST00000577085 IGLL5B9A064 214 aa11.22□□□□□ -0.61
SF3B3-215ENST00000577085 F6UB75 175 aa11.22□□□□□ -0.61
SF3B3-215ENST00000577085 H3BRN7 92 aa11.22□□□□□ -0.61
SF3B3-215ENST00000577085 TCTAP57738 103 aa11.22□□□□□ -0.61
SF3B3-215ENST00000577085 S100A10P60903 97 aa11.22□□□□□ -0.61
SF3B3-215ENST00000577085 RAB31Q13636 194 aa11.22□□□□□ -0.61
SF3B3-215ENST00000577085 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.22□□□□□ -0.61
SF3B3-215ENST00000577085 CLUHP3Q96NS8 147 aa11.22□□□□□ -0.61
SF3B3-215ENST00000577085 SHANK2-AS3Q9BTD1 123 aa11.22□□□□□ -0.61
SF3B3-215ENST00000577085 GOLT1BQ9Y3E0 138 aa11.22□□□□□ -0.61
SF3B3-215ENST00000577085 DNAH1Q9P2D7 4330 aa11.21□□□□□ -0.61
SF3B3-215ENST00000577085 ELOA3CA0A087WX78 387 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-215ENST00000577085 TRAV10A0A0B4J240 114 aa11.21□□□□□ -0.61
SF3B3-215ENST00000577085 A0A0J9YX75 114 aa11.21□□□□□ -0.61
SF3B3-215ENST00000577085 EMP1P54849 157 aa11.21□□□□□ -0.61
SF3B3-215ENST00000577085 PXDC1Q5TGL8 231 aa11.21□□□□□ -0.61
SF3B3-215ENST00000577085 ENKURQ8TC29 256 aa11.21□□□□□ -0.61
SF3B3-215ENST00000577085 C2orf50Q96LR7 162 aa11.21□□□□□ -0.61
SF3B3-215ENST00000577085 UHRF2Q96PU4 802 aa11.21□□□□□ -0.61
SF3B3-215ENST00000577085 TMEM208Q9BTX3 173 aa11.21□□□□□ -0.61
SF3B3-215ENST00000577085 SLC35B3Q9H1N7 401 aa11.21□□□□□ -0.61
SF3B3-215ENST00000577085 TMEM189A5PLL7 270 aa11.2□□□□□ -0.62
SF3B3-215ENST00000577085 SMIM9A6NGZ8 99 aa11.2□□□□□ -0.62
SF3B3-215ENST00000577085 K7EPK0 472 aa11.2□□□□□ -0.62
SF3B3-215ENST00000577085 AGPAT2O15120 278 aa11.2□□□□□ -0.62
SF3B3-215ENST00000577085 COX7A2P2O60397 106 aa11.2□□□□□ -0.62
SF3B3-215ENST00000577085 DEDDO75618 318 aa11.2□□□□□ -0.62
SF3B3-215ENST00000577085 DUSP14O95147 198 aaKnown RBP11.2□□□□□ -0.62
SF3B3-215ENST00000577085 PLP1P60201 277 aa11.2□□□□□ -0.62
SF3B3-215ENST00000577085 LGALS9CQ6DKI2 356 aa11.2□□□□□ -0.62
SF3B3-215ENST00000577085 Q6ZTC4 211 aa11.2□□□□□ -0.62
SF3B3-215ENST00000577085 ZNF738Q8NE65 137 aa11.2□□□□□ -0.62
SF3B3-215ENST00000577085 C20orf173Q96LM9 149 aa11.2□□□□□ -0.62
SF3B3-215ENST00000577085 ARV1Q9H2C2 271 aa11.2□□□□□ -0.62
SF3B3-215ENST00000577085 GPN1Q9HCN4 374 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-215ENST00000577085 ALMS1Q8TCU4 4167 aa11.2□□□□□ -0.62
SF3B3-215ENST00000577085 ASAH1Q13510 395 aa11.19□□□□□ -0.62
SF3B3-215ENST00000577085 IGFL4Q6B9Z1 124 aa11.19□□□□□ -0.62
SF3B3-215ENST00000577085 ZNF705AQ6ZN79 300 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-215ENST00000577085 STX12Q86Y82 276 aa11.19□□□□□ -0.62
SF3B3-215ENST00000577085 RNF182Q8N6D2 247 aa11.19□□□□□ -0.62
SF3B3-215ENST00000577085 ZNF709Q8N972 641 aa11.19□□□□□ -0.62
SF3B3-215ENST00000577085 NEU1Q99519 415 aa11.19□□□□□ -0.62
SF3B3-215ENST00000577085 PPP1R14DQ9NXH3 145 aa11.19□□□□□ -0.62
SF3B3-215ENST00000577085 RFNGQ9Y644 331 aa11.19□□□□□ -0.62
SF3B3-215ENST00000577085 PLECQ15149 4684 aaKnown RBP11.19□□□□□ -0.62
SF3B3-215ENST00000577085 ZNF705FA8MVS1 300 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-215ENST00000577085 CST7O76096 145 aa11.18□□□□□ -0.62
SF3B3-215ENST00000577085 HBE1P02100 147 aa11.18□□□□□ -0.62
SF3B3-215ENST00000577085 ZNF705DP0CH99 300 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-215ENST00000577085 ZNF705BP0CI00 300 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-215ENST00000577085 SPART-AS1P0CW21 52 aa11.18□□□□□ -0.62
SF3B3-215ENST00000577085 ARL16Q0P5N6 197 aa11.18□□□□□ -0.62
SF3B3-215ENST00000577085 Q6ZRG5 221 aa11.18□□□□□ -0.62
SF3B3-215ENST00000577085 ZNF767PQ75MW2 155 aa11.18□□□□□ -0.62
SF3B3-215ENST00000577085 LINC00305Q7Z4B0 112 aa11.18□□□□□ -0.62
SF3B3-215ENST00000577085 UQCC1Q9NVA1 299 aa11.18□□□□□ -0.62
SF3B3-215ENST00000577085 DEFB131BA0A096LNP1 70 aa11.17□□□□□ -0.62
SF3B3-215ENST00000577085 AMBPP02760 352 aa11.17□□□□□ -0.62
SF3B3-215ENST00000577085 CAMLGP49069 296 aa11.17□□□□□ -0.62
SF3B3-215ENST00000577085 CNN1P51911 297 aaKnown RBP11.17□□□□□ -0.62
SF3B3-215ENST00000577085 HBG1P69891 147 aa11.17□□□□□ -0.62
SF3B3-215ENST00000577085 HBG2P69892 147 aa11.17□□□□□ -0.62
SF3B3-215ENST00000577085 C10orf113Q5VZT2 155 aa11.17□□□□□ -0.62
SF3B3-215ENST00000577085 CELA1Q9UNI1 258 aa11.17□□□□□ -0.62
SF3B3-215ENST00000577085 A0A087X0K7 114 aa11.16□□□□□ -0.62
SF3B3-215ENST00000577085 TEX48A0A1B0GUV7 120 aa11.16□□□□□ -0.62
SF3B3-215ENST00000577085 FAM24AA6NFZ4 105 aa11.16□□□□□ -0.62
SF3B3-215ENST00000577085 UPK1BO75841 260 aa11.16□□□□□ -0.62
SF3B3-215ENST00000577085 S100A11P31949 105 aa11.16□□□□□ -0.62
SF3B3-215ENST00000577085 SULT1A1P50225 295 aa11.16□□□□□ -0.62
SF3B3-215ENST00000577085 RHOBP62745 196 aa11.16□□□□□ -0.62
SF3B3-215ENST00000577085 PATE2Q6UY27 113 aa11.16□□□□□ -0.62
SF3B3-215ENST00000577085 NRARPQ7Z6K4 114 aa11.16□□□□□ -0.62
SF3B3-215ENST00000577085 BPIFA4PQ86YQ2 179 aa11.16□□□□□ -0.62
SF3B3-215ENST00000577085 MGST2Q99735 147 aa11.16□□□□□ -0.62
SF3B3-215ENST00000577085 LYRM2Q9NU23 88 aaPredicted RBP11.16□□□□□ -0.62
SF3B3-215ENST00000577085 IGHV4-4A0A075B6R2 117 aa11.15□□□□□ -0.62
SF3B3-215ENST00000577085 TRAV8-2A0A0B4J237 113 aa11.15□□□□□ -0.62
SF3B3-215ENST00000577085 UBE2L5PA0A1B0GUS4 154 aa11.15□□□□□ -0.62
SF3B3-215ENST00000577085 INSP01308 110 aa11.15□□□□□ -0.62
SF3B3-215ENST00000577085 HIST1H1AQ02539 215 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 577.8 ms