RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 GNPNAT1Q96EK6 184 aaPredicted RBP6.88□□□□□ -1.31
CALCOCO2-227ENST00000575560 SLC35E1Q96K37 410 aa6.88□□□□□ -1.31
CALCOCO2-227ENST00000575560 LINC01587Q99440 93 aa6.88□□□□□ -1.31
CALCOCO2-227ENST00000575560 RBKSQ9H477 322 aa6.88□□□□□ -1.31
CALCOCO2-227ENST00000575560 SLC45A2Q9UMX9 530 aa6.88□□□□□ -1.31
CALCOCO2-227ENST00000575560 GPR132Q9UNW8 380 aa6.88□□□□□ -1.31
CALCOCO2-227ENST00000575560 C14orf166Q9Y224 244 aaKnown RBP6.88□□□□□ -1.31
CALCOCO2-227ENST00000575560 TRAV26-1A0A087WT03 109 aa6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 H3BNG1 76 aa6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 TNFAIP8O95379 198 aa6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 CFDP00746 253 aaPredicted RBP6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 M6PRP20645 277 aa6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 CCR6P51684 374 aa6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 TAS2R19P59542 299 aa6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 SURF2Q15527 256 aaPredicted RBP6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 GPR107Q5VW38 600 aa6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 LINC00612Q8N6U2 182 aa6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 OR1B1Q8NGR6 318 aa6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 RNASE8Q8TDE3 154 aaKnown RBP6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 C16orf74Q96GX8 76 aa6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 SLC25A39Q9BZJ4 359 aaPredicted RBP6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 NOP10Q9NPE3 64 aaKnown RBP6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 ZNF586Q9NXT0 402 aa6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 MRPS16Q9Y3D3 137 aaKnown RBP6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 FLG2Q5D862 2391 aaPredicted RBP6.87□□□□□ -1.31
CALCOCO2-227ENST00000575560 BOLA2-SMG1P6H3BVE0 249 aa6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 ZNF701M0R085 212 aaPredicted RBP6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 HOXA5P20719 270 aa6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 FUSP35637 526 aaKnown RBP eCLIP6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 LINC00315P59091 139 aa6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 NCS1P62166 190 aa6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 OR5I1Q13606 314 aa6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 SMCO1Q147U7 214 aa6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 GGNBP1Q5YKI7 109 aa6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 FAAP20Q6NZ36 180 aa6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 ZNF493Q6ZR52 646 aa6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 TMEM144Q7Z5S9 345 aa6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 RNF182Q8N6D2 247 aa6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 OR10J6PQ8NGY7 276 aa6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 GPR82Q96P67 336 aa6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 SLC25A22Q9H936 323 aa6.86□□□□□ -1.31
CALCOCO2-227ENST00000575560 FAM25AB3EWG3 89 aa6.85□□□□□ -1.31
CALCOCO2-227ENST00000575560 FAM25CB3EWG5 89 aa6.85□□□□□ -1.31
CALCOCO2-227ENST00000575560 FAM25GB3EWG6 89 aa6.85□□□□□ -1.31
CALCOCO2-227ENST00000575560 HTN1P15515 57 aa6.85□□□□□ -1.31
CALCOCO2-227ENST00000575560 ZNF182P17025 639 aaPredicted RBP6.85□□□□□ -1.31
CALCOCO2-227ENST00000575560 VBP1P61758 197 aa6.85□□□□□ -1.31
CALCOCO2-227ENST00000575560 CDPF1Q6NVV7 123 aa6.85□□□□□ -1.31
CALCOCO2-227ENST00000575560 TMEM182Q6ZP80 229 aaPredicted RBP6.85□□□□□ -1.31
CALCOCO2-227ENST00000575560 LYZL2Q7Z4W2 148 aa6.85□□□□□ -1.31
CALCOCO2-227ENST00000575560 TMEM263Q8WUH6 116 aaKnown RBP6.85□□□□□ -1.31
CALCOCO2-227ENST00000575560 FRZBQ92765 325 aa6.85□□□□□ -1.31
CALCOCO2-227ENST00000575560 PRR13Q9NZ81 148 aa6.85□□□□□ -1.31
CALCOCO2-227ENST00000575560 KCNIP3Q9Y2W7 256 aa6.85□□□□□ -1.31
CALCOCO2-227ENST00000575560 A0A0B4J2A0 478 aa6.84□□□□□ -1.31
CALCOCO2-227ENST00000575560 A0A0J9YY99 117 aa6.84□□□□□ -1.31
CALCOCO2-227ENST00000575560 ORM2P19652 201 aa6.84□□□□□ -1.31
CALCOCO2-227ENST00000575560 GATA2P23769 480 aaPredicted RBP6.84□□□□□ -1.31
CALCOCO2-227ENST00000575560 SSBP1Q04837 148 aaKnown RBP6.84□□□□□ -1.31
CALCOCO2-227ENST00000575560 MZT2AQ6P582 158 aa6.84□□□□□ -1.31
CALCOCO2-227ENST00000575560 ZNF738Q8NE65 137 aa6.84□□□□□ -1.31
CALCOCO2-227ENST00000575560 OR8A1Q8NGG7 326 aa6.84□□□□□ -1.31
CALCOCO2-227ENST00000575560 C15orf40Q8WUR7 153 aa6.84□□□□□ -1.31
CALCOCO2-227ENST00000575560 FUNDC2Q9BWH2 189 aa6.84□□□□□ -1.31
CALCOCO2-227ENST00000575560 PTTG2Q9NZH5 202 aa6.84□□□□□ -1.31
CALCOCO2-227ENST00000575560 EXTL2Q9UBQ6 330 aa6.84□□□□□ -1.31
CALCOCO2-227ENST00000575560 SHPKQ9UHJ6 478 aa6.84□□□□□ -1.31
CALCOCO2-227ENST00000575560 DISC1C4P0D8 188 aa6.83□□□□□ -1.32
CALCOCO2-227ENST00000575560 PRSS46E5RG02 174 aa6.83□□□□□ -1.32
CALCOCO2-227ENST00000575560 PITX3O75364 302 aa6.83□□□□□ -1.32
CALCOCO2-227ENST00000575560 ADAP1O75689 374 aa6.83□□□□□ -1.32
CALCOCO2-227ENST00000575560 ATP6V1G2O95670 118 aa6.83□□□□□ -1.32
CALCOCO2-227ENST00000575560 CXCL3P19876 107 aa6.83□□□□□ -1.32
CALCOCO2-227ENST00000575560 CDKN1BP46527 198 aa6.83□□□□□ -1.32
CALCOCO2-227ENST00000575560 KRTAP10-1P60331 282 aa6.83□□□□□ -1.32
CALCOCO2-227ENST00000575560 RAB11AP62491 216 aa6.83□□□□□ -1.32
CALCOCO2-227ENST00000575560 RHOBP62745 196 aa6.83□□□□□ -1.32
CALCOCO2-227ENST00000575560 HIST1H1AQ02539 215 aaPredicted RBP6.83□□□□□ -1.32
CALCOCO2-227ENST00000575560 FGL1Q08830 312 aa6.83□□□□□ -1.32
CALCOCO2-227ENST00000575560 A0A096LPF7 62 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 GAGE12BA1L429 117 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 H3BRN7 92 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 H7BYZ3 331 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 EREGO14944 169 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 GAGE7O76087 117 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 GAGE12FP0CL80 117 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 GAGE12GP0CL81 117 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 GAGE12IP0CL82 117 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 AKR1C4P17516 323 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 S100A7P31151 101 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 KIR3DS1Q14943 382 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 PSG3Q16557 428 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 BPIFCQ8NFQ6 507 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 OR1S1Q8NH92 325 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 VSIG2Q96IQ7 327 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 C20orf144Q9BQM9 153 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 SHANK2-AS3Q9BTD1 123 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 TMEM147Q9BVK8 224 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 PPP1R14DQ9NXH3 145 aa6.82□□□□□ -1.32
CALCOCO2-227ENST00000575560 MDFICQ9P1T7 246 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms