RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 LGI3Q8N145 548 aa8.39□□□□□ -1.07
PRPF8-208ENST00000573716 MARCH1Q8TCQ1 289 aa8.39□□□□□ -1.07
PRPF8-208ENST00000573716 RBPMSQ93062 196 aaKnown RBP8.39□□□□□ -1.07
PRPF8-208ENST00000573716 TMEM222Q9H0R3 208 aa8.39□□□□□ -1.07
PRPF8-208ENST00000573716 BATF3Q9NR55 127 aa8.39□□□□□ -1.07
PRPF8-208ENST00000573716 VPS13BQ7Z7G8 4022 aa8.39□□□□□ -1.07
PRPF8-208ENST00000573716 GAGE12BA1L429 117 aa8.38□□□□□ -1.07
PRPF8-208ENST00000573716 ADAP1O75689 374 aa8.38□□□□□ -1.07
PRPF8-208ENST00000573716 GAGE7O76087 117 aa8.38□□□□□ -1.07
PRPF8-208ENST00000573716 CDS2O95674 445 aa8.38□□□□□ -1.07
PRPF8-208ENST00000573716 GAGE12FP0CL80 117 aa8.38□□□□□ -1.07
PRPF8-208ENST00000573716 GAGE12GP0CL81 117 aa8.38□□□□□ -1.07
PRPF8-208ENST00000573716 GAGE12IP0CL82 117 aa8.38□□□□□ -1.07
PRPF8-208ENST00000573716 HOXA5P20719 270 aa8.38□□□□□ -1.07
PRPF8-208ENST00000573716 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.38□□□□□ -1.07
PRPF8-208ENST00000573716 TMEM256Q8N2U0 113 aa8.38□□□□□ -1.07
PRPF8-208ENST00000573716 ZNF503Q96F45 646 aa8.38□□□□□ -1.07
PRPF8-208ENST00000573716 PAIP2BQ9ULR5 123 aaKnown RBP8.38□□□□□ -1.07
PRPF8-208ENST00000573716 RAB26Q9ULW5 256 aa8.38□□□□□ -1.07
PRPF8-208ENST00000573716 C14orf166Q9Y224 244 aaKnown RBP8.38□□□□□ -1.07
PRPF8-208ENST00000573716 TNFRSF18Q9Y5U5 241 aa8.38□□□□□ -1.07
PRPF8-208ENST00000573716 B3GALNT1O75752 331 aa8.37□□□□□ -1.07
PRPF8-208ENST00000573716 SULT1A3P0DMM9 295 aa8.37□□□□□ -1.07
PRPF8-208ENST00000573716 SULT1A4P0DMN0 295 aa8.37□□□□□ -1.07
PRPF8-208ENST00000573716 DTD1Q8TEA8 209 aa8.37□□□□□ -1.07
PRPF8-208ENST00000573716 GLYATL2Q8WU03 294 aa8.37□□□□□ -1.07
PRPF8-208ENST00000573716 RBKSQ9H477 322 aa8.37□□□□□ -1.07
PRPF8-208ENST00000573716 U3KQ87 197 aa8.37□□□□□ -1.07
PRPF8-208ENST00000573716 ZNF98A6NK75 572 aa8.36□□□□□ -1.07
PRPF8-208ENST00000573716 SIVA1O15304 175 aa8.36□□□□□ -1.07
PRPF8-208ENST00000573716 APOA1P02647 267 aa8.36□□□□□ -1.07
PRPF8-208ENST00000573716 ORM2P19652 201 aa8.36□□□□□ -1.07
PRPF8-208ENST00000573716 GPX4P36969 197 aaPredicted RBP8.36□□□□□ -1.07
PRPF8-208ENST00000573716 ZNF493Q6ZR52 646 aa8.36□□□□□ -1.07
PRPF8-208ENST00000573716 OR4D10Q8NGI6 311 aa8.36□□□□□ -1.07
PRPF8-208ENST00000573716 OR1B1Q8NGR6 318 aa8.36□□□□□ -1.07
PRPF8-208ENST00000573716 TERB2Q8NHR7 220 aa8.36□□□□□ -1.07
PRPF8-208ENST00000573716 TMEM263Q8WUH6 116 aaKnown RBP8.36□□□□□ -1.07
PRPF8-208ENST00000573716 NAA60Q9H7X0 242 aa8.36□□□□□ -1.07
PRPF8-208ENST00000573716 TRAV8-2A0A0B4J237 113 aa8.35□□□□□ -1.07
PRPF8-208ENST00000573716 FAM25AB3EWG3 89 aa8.35□□□□□ -1.07
PRPF8-208ENST00000573716 FAM25CB3EWG5 89 aa8.35□□□□□ -1.07
PRPF8-208ENST00000573716 FAM25GB3EWG6 89 aa8.35□□□□□ -1.07
PRPF8-208ENST00000573716 HPGDSO60760 199 aa8.35□□□□□ -1.07
PRPF8-208ENST00000573716 RLN2P04090 185 aa8.35□□□□□ -1.07
PRPF8-208ENST00000573716 GCSHP23434 173 aa8.35□□□□□ -1.07
PRPF8-208ENST00000573716 CCDC28AQ8IWP9 274 aa8.35□□□□□ -1.07
PRPF8-208ENST00000573716 OR52I2Q8NH67 350 aa8.35□□□□□ -1.07
PRPF8-208ENST00000573716 RNASE8Q8TDE3 154 aaKnown RBP8.35□□□□□ -1.07
PRPF8-208ENST00000573716 TRGV9Q99603 122 aa8.35□□□□□ -1.07
PRPF8-208ENST00000573716 PRR13Q9NZ81 148 aa8.35□□□□□ -1.07
PRPF8-208ENST00000573716 FAT1Q14517 4588 aa8.35□□□□□ -1.07
PRPF8-208ENST00000573716 A0A087WTM6 91 aa8.34□□□□□ -1.07
PRPF8-208ENST00000573716 SNURFLB1AK76 121 aa8.34□□□□□ -1.07
PRPF8-208ENST00000573716 NXPH4O95158 308 aa8.34□□□□□ -1.07
PRPF8-208ENST00000573716 RAB3DO95716 219 aa8.34□□□□□ -1.07
PRPF8-208ENST00000573716 GGNBP1Q5YKI7 109 aa8.34□□□□□ -1.07
PRPF8-208ENST00000573716 OR8A1Q8NGG7 326 aa8.34□□□□□ -1.07
PRPF8-208ENST00000573716 LRRC20Q8TCA0 184 aa8.34□□□□□ -1.07
PRPF8-208ENST00000573716 TMEM147Q9BVK8 224 aa8.34□□□□□ -1.07
PRPF8-208ENST00000573716 TMPRSS5Q9H3S3 457 aa8.34□□□□□ -1.07
PRPF8-208ENST00000573716 CACFD1Q9UGQ2 172 aa8.34□□□□□ -1.07
PRPF8-208ENST00000573716 A0A096LPF7 62 aa8.33□□□□□ -1.08
PRPF8-208ENST00000573716 H7BYZ3 331 aa8.33□□□□□ -1.08
PRPF8-208ENST00000573716 TBPP20226 339 aa8.33□□□□□ -1.08
PRPF8-208ENST00000573716 GATA2P23769 480 aaPredicted RBP8.33□□□□□ -1.08
PRPF8-208ENST00000573716 LCE2CQ5TA81 110 aa8.33□□□□□ -1.08
PRPF8-208ENST00000573716 FAAP20Q6NZ36 180 aa8.33□□□□□ -1.08
PRPF8-208ENST00000573716 TMED4Q7Z7H5 227 aa8.33□□□□□ -1.08
PRPF8-208ENST00000573716 GPR82Q96P67 336 aa8.33□□□□□ -1.08
PRPF8-208ENST00000573716 RTBDNQ9BSG5 229 aaPredicted RBP8.33□□□□□ -1.08
PRPF8-208ENST00000573716 HSPB7Q9UBY9 170 aa8.33□□□□□ -1.08
PRPF8-208ENST00000573716 IGKV1OR2-108A0A075B7D4 117 aa8.32□□□□□ -1.08
PRPF8-208ENST00000573716 H3BNG1 76 aa8.32□□□□□ -1.08
PRPF8-208ENST00000573716 CFDP00746 253 aaPredicted RBP8.32□□□□□ -1.08
PRPF8-208ENST00000573716 IAPPP10997 89 aa8.32□□□□□ -1.08
PRPF8-208ENST00000573716 CDKN1BP46527 198 aa8.32□□□□□ -1.08
PRPF8-208ENST00000573716 RAB11AP62491 216 aa8.32□□□□□ -1.08
PRPF8-208ENST00000573716 SMCO1Q147U7 214 aa8.32□□□□□ -1.08
PRPF8-208ENST00000573716 GPR107Q5VW38 600 aa8.32□□□□□ -1.08
PRPF8-208ENST00000573716 NFE4Q86UQ8 179 aa8.32□□□□□ -1.08
PRPF8-208ENST00000573716 BPIFCQ8NFQ6 507 aa8.32□□□□□ -1.08
PRPF8-208ENST00000573716 OR4D5Q8NGN0 318 aa8.32□□□□□ -1.08
PRPF8-208ENST00000573716 OR1S1Q8NH92 325 aa8.32□□□□□ -1.08
PRPF8-208ENST00000573716 PARD6GQ9BYG4 376 aaPredicted RBP8.32□□□□□ -1.08
PRPF8-208ENST00000573716 Q9H521 79 aa8.32□□□□□ -1.08
PRPF8-208ENST00000573716 TRGV2A0A075B6R0 118 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 CRYM-AS1A6NIL9 109 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 J3KRW8 73 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 S100A7P31151 101 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 CCR6P51684 374 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 TAS2R19P59542 299 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 KIR3DS1Q14943 382 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 PSG3Q16557 428 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 STEAP1BQ6NZ63 245 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 Q6ZTI0 123 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 CCDC190Q86UF4 302 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 LINC00612Q8N6U2 182 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 THAP8Q8NA92 274 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 SYT8Q8NBV8 401 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms