RNA–Protein interactions for RNA: ENST00000568459.5

PKM-220, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 1,806 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-220ENST00000568459 RIPPLY3P57055 190 aa11.57□□□□□ -0.56
PKM-220ENST00000568459 BSPH1Q075Z2 132 aa11.57□□□□□ -0.56
PKM-220ENST00000568459 C5orf17Q8NAS9 161 aa11.57□□□□□ -0.56
PKM-220ENST00000568459 NUP37Q8NFH4 326 aa11.57□□□□□ -0.56
PKM-220ENST00000568459 LINC00479Q96M42 142 aa11.57□□□□□ -0.56
PKM-220ENST00000568459 MRPL20Q9BYC9 149 aaKnown RBP11.57□□□□□ -0.56
PKM-220ENST00000568459 FNDC4Q9H6D8 234 aaPredicted RBP11.57□□□□□ -0.56
PKM-220ENST00000568459 TRBV6-1A0A0K0K1D8 114 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 NPIPB6E9PJ23 425 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 HLA-DRB1P01911 266 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 PYYP10082 97 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 LRRC10Q5BKY1 277 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 Q5PR19 223 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 LINC00305Q7Z4B0 112 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 NPIPB3Q92617 1050 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 CCL13Q99616 98 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 NIPBLQ6KC79 2804 aaeCLIP11.56□□□□□ -0.569e-10■■□□□ 12.5
PKM-220ENST00000568459 CGB1A6NKQ9 187 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 CCL25O15444 150 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 TNFRSF1AP19438 455 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 MC5RP33032 325 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 FOXA3P55318 350 aaPredicted RBP11.56□□□□□ -0.56
PKM-220ENST00000568459 WT1-ASQ06250 92 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 PRSS57Q6UWY2 283 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 URB1-AS1Q96HZ7 61 aa11.56□□□□□ -0.56
PKM-220ENST00000568459 IGHV2-70DA0A0C4DH43 119 aa11.55□□□□□ -0.56
PKM-220ENST00000568459 CORTO00230 105 aa11.55□□□□□ -0.56
PKM-220ENST00000568459 IGLV2-23P01705 113 aa11.55□□□□□ -0.56
PKM-220ENST00000568459 LGALS7P47929 136 aa11.55□□□□□ -0.56
PKM-220ENST00000568459 VMA21Q3ZAQ7 101 aa11.55□□□□□ -0.56
PKM-220ENST00000568459 ZNF672Q499Z4 452 aaPredicted RBP11.55□□□□□ -0.56
PKM-220ENST00000568459 Q56UQ5 140 aa11.55□□□□□ -0.56
PKM-220ENST00000568459 FAM201AQ5SY85 155 aa11.55□□□□□ -0.56
PKM-220ENST00000568459 FAM120AOSQ5T036 256 aa11.55□□□□□ -0.56
PKM-220ENST00000568459 RNASEKQ6P5S7 137 aaKnown RBP11.55□□□□□ -0.56
PKM-220ENST00000568459 DUX4L9Q6RFH8 374 aaPredicted RBP11.55□□□□□ -0.56
PKM-220ENST00000568459 TMEM108Q6UXF1 575 aa11.55□□□□□ -0.56
PKM-220ENST00000568459 KRTAP1-3Q8IUG1 177 aa11.55□□□□□ -0.56
PKM-220ENST00000568459 FAM216BQ8N7L0 139 aa11.55□□□□□ -0.56
PKM-220ENST00000568459 TMEM116Q8NCL8 245 aa11.55□□□□□ -0.56
PKM-220ENST00000568459 MS4A6AQ9H2W1 248 aa11.55□□□□□ -0.56
PKM-220ENST00000568459 WASHC3Q9Y3C0 194 aa11.55□□□□□ -0.56
PKM-220ENST00000568459 VWC2LB2RUY7 222 aa11.54□□□□□ -0.56
PKM-220ENST00000568459 SLC25A5P05141 298 aaKnown RBP11.54□□□□□ -0.56
PKM-220ENST00000568459 LCN12Q6JVE5 192 aa11.54□□□□□ -0.56
PKM-220ENST00000568459 PET117Q6UWS5 81 aa11.54□□□□□ -0.56
PKM-220ENST00000568459 ZNF841Q6ZN19 808 aa11.54□□□□□ -0.56
PKM-220ENST00000568459 RBPMS2Q6ZRY4 209 aaKnown RBP11.54□□□□□ -0.56
PKM-220ENST00000568459 GATD1Q8NB37 220 aa11.54□□□□□ -0.56
PKM-220ENST00000568459 IGFBPL1Q8WX77 278 aa11.54□□□□□ -0.56
PKM-220ENST00000568459 C22orf15Q8WYQ4 148 aa11.54□□□□□ -0.56
PKM-220ENST00000568459 ST6GALNAC6Q969X2 333 aa11.54□□□□□ -0.56
PKM-220ENST00000568459 ZNF469Q96JG9 3925 aaPredicted RBP11.54□□□□□ -0.56
PKM-220ENST00000568459 VPS13CQ709C8 3753 aa11.54□□□□□ -0.56
PKM-220ENST00000568459 TRAV30A0A087WSZ9 112 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 TRAV34A0A0B4J273 112 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 SYS1-DBNDD2H3BUS1 97 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 LIPFP07098 398 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 NBEAP1P0C6P0 100 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 HINT1P49773 126 aaPredicted RBP11.53□□□□□ -0.56
PKM-220ENST00000568459 C16orf54Q6UWD8 224 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 TMEM191AQ9H0A3 160 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 PGPA6NDG6 321 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 OR4C46A6NHA9 309 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 HAX1O00165 279 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 MOSP00540 346 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 P01737 135 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 ATP5J2P56134 94 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 RHOGP84095 191 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 TEX45Q8NA69 505 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 Q96MF0 132 aa11.53□□□□□ -0.56
PKM-220ENST00000568459 A0A1B0GW15 77 aa11.52□□□□□ -0.57
PKM-220ENST00000568459 SHISA9B4DS77 424 aa11.52□□□□□ -0.57
PKM-220ENST00000568459 E7EUB6 86 aa11.52□□□□□ -0.57
PKM-220ENST00000568459 LEPROTL1O95214 131 aa11.52□□□□□ -0.57
PKM-220ENST00000568459 TCRAP04437 139 aa11.52□□□□□ -0.57
PKM-220ENST00000568459 GP9P14770 177 aa11.52□□□□□ -0.57
PKM-220ENST00000568459 CD40P25942 277 aa11.52□□□□□ -0.57
PKM-220ENST00000568459 SSBP2P81877 361 aaPredicted RBP11.52□□□□□ -0.57
PKM-220ENST00000568459 C12orf54Q6X4T0 127 aa11.52□□□□□ -0.57
PKM-220ENST00000568459 C8orf46Q8TAG6 207 aa11.52□□□□□ -0.57
PKM-220ENST00000568459 TMEM14CQ9P0S9 112 aa11.52□□□□□ -0.57
PKM-220ENST00000568459 NF1P21359 2839 aa11.52□□□□□ -0.57
PKM-220ENST00000568459 IGHV1-24A0A0C4DH33 117 aa11.51□□□□□ -0.57
PKM-220ENST00000568459 HOXB4P17483 251 aaPredicted RBP11.51□□□□□ -0.57
PKM-220ENST00000568459 CDKN1BP46527 198 aa11.51□□□□□ -0.57
PKM-220ENST00000568459 CAMPP49913 170 aa11.51□□□□□ -0.57
PKM-220ENST00000568459 MAJINQ3KP22 176 aa11.51□□□□□ -0.57
PKM-220ENST00000568459 PRR27Q6MZM9 219 aa11.51□□□□□ -0.57
PKM-220ENST00000568459 ATOH7Q8N100 152 aa11.51□□□□□ -0.57
PKM-220ENST00000568459 DAZAP1Q96EP5 407 aaKnown RBP11.51□□□□□ -0.57
PKM-220ENST00000568459 SSBP4Q9BWG4 385 aaPredicted RBP11.51□□□□□ -0.57
PKM-220ENST00000568459 GSX1Q9H4S2 264 aaPredicted RBP11.51□□□□□ -0.57
PKM-220ENST00000568459 OTORQ9NRC9 128 aa11.51□□□□□ -0.57
PKM-220ENST00000568459 RNF24Q9Y225 148 aa11.51□□□□□ -0.57
PKM-220ENST00000568459 NAV3Q8IVL0 2385 aa11.51□□□□□ -0.57
PKM-220ENST00000568459 TLN2Q9Y4G6 2542 aa11.51□□□□□ -0.57
PKM-220ENST00000568459 ZFHX3Q15911 3703 aa11.51□□□□□ -0.57
PKM-220ENST00000568459 LOC102724200A0A096LPH7 203 aaPredicted RBP11.51□□□□□ -0.57
PKM-220ENST00000568459 OVOL3O00110 214 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms