RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 SGK494Q96LW2 274 aa14.17□□□□□ -0.14
SMPD3-211ENST00000568373 MEGF9Q9H1U4 602 aa14.17□□□□□ -0.14
SMPD3-211ENST00000568373 C7orf69Q9H7B7 122 aa14.17□□□□□ -0.14
SMPD3-211ENST00000568373 MOB4Q9Y3A3 225 aa14.17□□□□□ -0.14
SMPD3-211ENST00000568373 LINC01548A6NM66 108 aa14.16□□□□□ -0.14
SMPD3-211ENST00000568373 IGHV4-38-2P0DP08 117 aa14.16□□□□□ -0.14
SMPD3-211ENST00000568373 PLA2G2AP14555 144 aa14.16□□□□□ -0.14
SMPD3-211ENST00000568373 PAX1P15863 534 aa14.16□□□□□ -0.14
SMPD3-211ENST00000568373 DSCR9P59020 149 aa14.16□□□□□ -0.14
SMPD3-211ENST00000568373 S100A12P80511 92 aa14.16□□□□□ -0.14
SMPD3-211ENST00000568373 C15orf32Q32M92 178 aa14.16□□□□□ -0.14
SMPD3-211ENST00000568373 EXOC3-AS1Q8N2X6 119 aa14.16□□□□□ -0.14
SMPD3-211ENST00000568373 GCN1Q92616 2671 aaKnown RBP14.16□□□□□ -0.14
SMPD3-211ENST00000568373 TRBV9A0A0B4J1U6 114 aa14.16□□□□□ -0.14
SMPD3-211ENST00000568373 LTAP01374 205 aa14.16□□□□□ -0.14
SMPD3-211ENST00000568373 CBLN1P23435 193 aa14.16□□□□□ -0.14
SMPD3-211ENST00000568373 RHOGP84095 191 aa14.16□□□□□ -0.14
SMPD3-211ENST00000568373 RPL19P84098 196 aaKnown RBP14.16□□□□□ -0.14
SMPD3-211ENST00000568373 CMTM2Q8TAZ6 248 aa14.16□□□□□ -0.14
SMPD3-211ENST00000568373 MLST8Q9BVC4 326 aa14.16□□□□□ -0.14
SMPD3-211ENST00000568373 CENPEQ02224 2701 aa14.16□□□□□ -0.14
SMPD3-211ENST00000568373 G3V318 75 aa14.15□□□□□ -0.14
SMPD3-211ENST00000568373 ADMP35318 185 aa14.15□□□□□ -0.14
SMPD3-211ENST00000568373 LYPD1Q8N2G4 141 aa14.15□□□□□ -0.14
SMPD3-211ENST00000568373 NUDT10Q8NFP7 164 aa14.15□□□□□ -0.14
SMPD3-211ENST00000568373 OR10D4PQ8NGN7 298 aa14.15□□□□□ -0.14
SMPD3-211ENST00000568373 ZNF502Q8TBZ5 544 aa14.15□□□□□ -0.14
SMPD3-211ENST00000568373 NUDT11Q96G61 164 aa14.15□□□□□ -0.14
SMPD3-211ENST00000568373 C17orf77Q96MU5 243 aa14.15□□□□□ -0.14
SMPD3-211ENST00000568373 CHRDL1Q9BU40 450 aa14.15□□□□□ -0.14
SMPD3-211ENST00000568373 ZFHX3Q15911 3703 aa14.15□□□□□ -0.14
SMPD3-211ENST00000568373 COX6B1P14854 86 aa14.14□□□□□ -0.15
SMPD3-211ENST00000568373 FABP4P15090 132 aa14.14□□□□□ -0.15
SMPD3-211ENST00000568373 TCL1AP56279 114 aa14.14□□□□□ -0.15
SMPD3-211ENST00000568373 PRR27Q6MZM9 219 aa14.14□□□□□ -0.15
SMPD3-211ENST00000568373 SIGLEC15Q6ZMC9 328 aa14.14□□□□□ -0.15
SMPD3-211ENST00000568373 MBD6Q96DN6 1003 aa14.14□□□□□ -0.15
SMPD3-211ENST00000568373 HIST1H2BLQ99880 126 aa14.14□□□□□ -0.15
SMPD3-211ENST00000568373 CSMD2Q7Z408 3487 aa14.14□□□□□ -0.15
SMPD3-211ENST00000568373 GATCO43716 136 aaKnown RBP14.14□□□□□ -0.15
SMPD3-211ENST00000568373 CA1P00915 261 aaPredicted RBP14.14□□□□□ -0.15
SMPD3-211ENST00000568373 AMY1AP04745 511 aa14.14□□□□□ -0.15
SMPD3-211ENST00000568373 IER3P46695 156 aa14.14□□□□□ -0.15
SMPD3-211ENST00000568373 ZNF414Q96IQ9 312 aa14.14□□□□□ -0.15
SMPD3-211ENST00000568373 USP9YO00507 2555 aaPredicted RBP14.14□□□□□ -0.15
SMPD3-211ENST00000568373 NBPF19A0A087WUL8 3843 aa14.13□□□□□ -0.15
SMPD3-211ENST00000568373 B4DSR2 109 aa14.13□□□□□ -0.15
SMPD3-211ENST00000568373 FRMD6-AS1P0C7T7 363 aa14.13□□□□□ -0.15
SMPD3-211ENST00000568373 GNB1LQ9BYB4 327 aa14.13□□□□□ -0.15
SMPD3-211ENST00000568373 MRPL18Q9H0U6 180 aaKnown RBP14.13□□□□□ -0.15
SMPD3-211ENST00000568373 A1L4Q6 167 aa14.13□□□□□ -0.15
SMPD3-211ENST00000568373 GPR183P32249 361 aa14.13□□□□□ -0.15
SMPD3-211ENST00000568373 PDE6HQ13956 83 aa14.13□□□□□ -0.15
SMPD3-211ENST00000568373 GOLT1AQ6ZVE7 132 aa14.13□□□□□ -0.15
SMPD3-211ENST00000568373 GRAMD2BQ96HH9 432 aa14.13□□□□□ -0.15
SMPD3-211ENST00000568373 NIT2Q9NQR4 276 aa14.13□□□□□ -0.15
SMPD3-211ENST00000568373 HIF1ANQ9NWT6 349 aa14.13□□□□□ -0.15
SMPD3-211ENST00000568373 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.12□□□□□ -0.15
SMPD3-211ENST00000568373 SNURFLB1AK76 121 aa14.12□□□□□ -0.15
SMPD3-211ENST00000568373 SPINK4O60575 86 aa14.12□□□□□ -0.15
SMPD3-211ENST00000568373 PYY3Q5JQD4 70 aa14.12□□□□□ -0.15
SMPD3-211ENST00000568373 Q86TA4 180 aa14.12□□□□□ -0.15
SMPD3-211ENST00000568373 TRAV8-1A0A0A6YYK1 113 aa14.11□□□□□ -0.15
SMPD3-211ENST00000568373 IZUMO1RA6ND01 250 aa14.11□□□□□ -0.15
SMPD3-211ENST00000568373 IGLV2-11P01706 119 aa14.11□□□□□ -0.15
SMPD3-211ENST00000568373 SLC25A16P16260 332 aa14.11□□□□□ -0.15
SMPD3-211ENST00000568373 SLC35B1P78383 322 aa14.11□□□□□ -0.15
SMPD3-211ENST00000568373 COX19Q49B96 90 aa14.11□□□□□ -0.15
SMPD3-211ENST00000568373 PACRGQ96M98 296 aaPredicted RBP14.11□□□□□ -0.15
SMPD3-211ENST00000568373 RABAC1Q9UI14 185 aa14.11□□□□□ -0.15
SMPD3-211ENST00000568373 CLEC3BP05452 202 aa14.11□□□□□ -0.15
SMPD3-211ENST00000568373 WDR73Q6P4I2 378 aa14.11□□□□□ -0.15
SMPD3-211ENST00000568373 ANKRD17O75179 2603 aaKnown RBP14.1□□□□□ -0.15
SMPD3-211ENST00000568373 FBN2P35556 2912 aa14.1□□□□□ -0.15
SMPD3-211ENST00000568373 TRBV6-1A0A0K0K1D8 114 aa14.1□□□□□ -0.15
SMPD3-211ENST00000568373 J3QKU1 62 aa14.1□□□□□ -0.15
SMPD3-211ENST00000568373 BMPR1BO00238 502 aa14.1□□□□□ -0.15
SMPD3-211ENST00000568373 AMBPP02760 352 aa14.1□□□□□ -0.15
SMPD3-211ENST00000568373 MT-ND6P03923 174 aa14.1□□□□□ -0.15
SMPD3-211ENST00000568373 RPL7P18124 248 aaKnown RBP14.1□□□□□ -0.15
SMPD3-211ENST00000568373 CRIP2P52943 208 aaPredicted RBP14.1□□□□□ -0.15
SMPD3-211ENST00000568373 C19orf54Q5BKX5 351 aa14.1□□□□□ -0.15
SMPD3-211ENST00000568373 CCDC140Q96MF4 163 aa14.1□□□□□ -0.15
SMPD3-211ENST00000568373 ZNF492Q9P255 531 aa14.1□□□□□ -0.15
SMPD3-211ENST00000568373 SOX21Q9Y651 276 aaPredicted RBP14.1□□□□□ -0.15
SMPD3-211ENST00000568373 FASNP49327 2511 aaKnown RBP14.1□□□□□ -0.15
SMPD3-211ENST00000568373 TRAV41A0A0B4J266 112 aa14.1□□□□□ -0.15
SMPD3-211ENST00000568373 TRAV20A0A0B4J274 112 aa14.1□□□□□ -0.15
SMPD3-211ENST00000568373 GATA3P23771 443 aa14.1□□□□□ -0.15
SMPD3-211ENST00000568373 LINC00322Q6ZN03 302 aaPredicted RBP14.1□□□□□ -0.15
SMPD3-211ENST00000568373 TSKUQ8WUA8 353 aa14.1□□□□□ -0.15
SMPD3-211ENST00000568373 EEF1AKMT3Q96AZ1 226 aa14.1□□□□□ -0.15
SMPD3-211ENST00000568373 IGHV3-35A0A0C4DH35 117 aa14.09□□□□□ -0.15
SMPD3-211ENST00000568373 S100A7P31151 101 aa14.09□□□□□ -0.15
SMPD3-211ENST00000568373 MRPL54Q6P161 138 aaKnown RBP14.09□□□□□ -0.15
SMPD3-211ENST00000568373 TOMM20LQ6UXN7 152 aa14.09□□□□□ -0.15
SMPD3-211ENST00000568373 TMEM136Q6ZRR5 245 aa14.09□□□□□ -0.15
SMPD3-211ENST00000568373 TMEM75Q8N9X5 138 aa14.09□□□□□ -0.15
SMPD3-211ENST00000568373 MS4A10Q96PG2 267 aa14.09□□□□□ -0.15
SMPD3-211ENST00000568373 PRSS22Q9GZN4 317 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms