RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 IGF2RP11717 2491 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 TRBV6-1A0A0K0K1D8 114 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 A0A1B0GV72 72 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 DEFB108AA8MXU0 73 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 UBE2L3P68036 154 aaKnown RBP4.36□□□□□ -1.71
LINC01541-202ENST00000568095 CD69Q07108 199 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 CD300EQ496F6 205 aaPredicted RBP4.36□□□□□ -1.71
LINC01541-202ENST00000568095 RPL39P5Q59GN2 51 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 CD177Q8N6Q3 437 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 EPDR1Q9UM22 224 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 SPCS1Q9Y6A9 102 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 GNG7O60262 68 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 RNASE2P10153 161 aaKnown RBP4.36□□□□□ -1.71
LINC01541-202ENST00000568095 HOXB4P17483 251 aaPredicted RBP4.36□□□□□ -1.71
LINC01541-202ENST00000568095 IGHV1-2P23083 117 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 CD24P25063 80 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 MDP1Q86V88 176 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 RPRMLQ8N4K4 120 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 THAP8Q8NA92 274 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 OR9G1Q8NH87 305 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 FAM57AQ8TBR7 257 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 FMC1Q96HJ9 113 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 RITA1Q96K30 269 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 PAXXQ9BUH6 204 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 PRNDQ9UKY0 176 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 U3KQK5 164 aa4.36□□□□□ -1.71
LINC01541-202ENST00000568095 IGKV1D-37A0A075B6S9 117 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 TEX48A0A1B0GUV7 120 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 UPK2O00526 184 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 MOSP00540 346 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 PLP1P60201 277 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 TBC1D28Q2M2D7 210 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 Q6ZT83 130 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 GCSAMQ8N6F7 178 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 TMEM116Q8NCL8 245 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 ADTRPQ96IZ2 230 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 AP1S3Q96PC3 154 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 MCRIP2Q9BUT9 160 aaKnown RBP4.35□□□□□ -1.71
LINC01541-202ENST00000568095 HIGD1BQ9P298 99 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 TANC2Q9HCD6 1990 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 DYSFO75923 2080 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 TEX50A0A1B0GTY4 177 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 A1L4Q6 167 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 IGLV1-44P01699 117 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 CT45A10P0DMU9 189 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 PYYP10082 97 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 ATP5J2P56134 94 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 TIMM23BQ5SRD1 257 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 CCDC144NLQ6NUI1 221 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 ZNF493Q6ZR52 646 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 FA2HQ7L5A8 372 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 OR1L4Q8NGR5 311 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 RFESDQ8TAC1 157 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 DCTN5Q9BTE1 182 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 CXXC4Q9H2H0 198 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 ENY2Q9NPA8 101 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 SPANXB1Q9NS25 103 aaPredicted RBP4.35□□□□□ -1.71
LINC01541-202ENST00000568095 ACACAQ13085 2346 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.35□□□□□ -1.71
LINC01541-202ENST00000568095 GAGE12HA6NDE8 117 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 LINC01546A6NGU7 62 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 PRSS29PA6NIE9 313 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 ZNF785A8K8V0 405 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 SCGB2A1O75556 95 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 IGKV3-15P01624 115 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 IGHV3-7P01780 117 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 TFF1P04155 84 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 MYOD1P15172 320 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 MC5RP33032 325 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 UQCRFS1P47985 274 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 ZNF138P52744 262 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 MFAP4P55083 255 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 MEF2CQ06413 473 aaPredicted RBP4.35□□□□□ -1.71
LINC01541-202ENST00000568095 PVRIGQ6DKI7 326 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 OR5AN1Q8NGI8 311 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 BLNKQ8WV28 456 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 TMEM190Q8WZ59 177 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 DAZAP1Q96EP5 407 aaKnown RBP4.35□□□□□ -1.71
LINC01541-202ENST00000568095 PGLYRP4Q96LB8 373 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 C18orf15Q96N68 181 aa4.35□□□□□ -1.71
LINC01541-202ENST00000568095 HRNRQ86YZ3 2850 aaPredicted RBP4.34□□□□□ -1.71
LINC01541-202ENST00000568095 PTPRZ1P23471 2315 aaPredicted RBP4.34□□□□□ -1.71
LINC01541-202ENST00000568095 RAI1Q7Z5J4 1906 aaPredicted RBP4.34□□□□□ -1.71
LINC01541-202ENST00000568095 DIDO1Q9BTC0 2240 aaKnown RBP4.34□□□□□ -1.71
LINC01541-202ENST00000568095 NBPF19A0A087WUL8 3843 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 A0A1B0GW15 77 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 F8W1H4 67 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 APOA2P02652 100 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 CT45A6P0DMU7 189 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 CT45A5P0DMU8 189 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 CT45A7P0DMV0 189 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 FABP2P12104 132 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 HOXA4Q00056 320 aaPredicted RBP4.34□□□□□ -1.71
LINC01541-202ENST00000568095 PRR30Q53SZ7 412 aaPredicted RBP4.34□□□□□ -1.71
LINC01541-202ENST00000568095 CT45A1Q5HYN5 189 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 PSMG4Q5JS54 123 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 C10orf113Q5VZT2 155 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 ZNF826PQ6ZT77 177 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 SLC25A48Q6ZT89 311 aaKnown RBP4.34□□□□□ -1.71
LINC01541-202ENST00000568095 C22orf34Q6ZV56 151 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms