RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 MBD3L1Q8WWY6 194 aa11.22□□□□□ -0.61
SPG7-213ENST00000566221 TMEM37Q8WXS4 190 aa11.22□□□□□ -0.61
SPG7-213ENST00000566221 UHRF2Q96PU4 802 aa11.22□□□□□ -0.61
SPG7-213ENST00000566221 SHANK2-AS3Q9BTD1 123 aa11.22□□□□□ -0.61
SPG7-213ENST00000566221 RHPN1-AS1Q9BWJ2 59 aa11.22□□□□□ -0.61
SPG7-213ENST00000566221 MRPL32Q9BYC8 188 aaKnown RBP11.22□□□□□ -0.61
SPG7-213ENST00000566221 GPR61Q9BZJ8 451 aa11.22□□□□□ -0.61
SPG7-213ENST00000566221 VSIRQ9H7M9 311 aa11.22□□□□□ -0.61
SPG7-213ENST00000566221 TECRQ9NZ01 308 aaKnown RBP11.22□□□□□ -0.61
SPG7-213ENST00000566221 MGAM2Q2M2H8 2515 aa11.22□□□□□ -0.61
SPG7-213ENST00000566221 TGP01266 2768 aa11.21□□□□□ -0.61
SPG7-213ENST00000566221 IGHV3OR16-13A0A075B7E8 117 aa11.21□□□□□ -0.61
SPG7-213ENST00000566221 IGHV3-74A0A0B4J1X5 117 aa11.21□□□□□ -0.61
SPG7-213ENST00000566221 LINC00862A6NCI5 91 aa11.21□□□□□ -0.61
SPG7-213ENST00000566221 CHEK1O14757 476 aa11.21□□□□□ -0.61
SPG7-213ENST00000566221 BUB3O43684 328 aa11.21□□□□□ -0.61
SPG7-213ENST00000566221 APOHP02749 345 aaPredicted RBP11.21□□□□□ -0.61
SPG7-213ENST00000566221 C1orf194Q5T5A4 169 aa11.21□□□□□ -0.61
SPG7-213ENST00000566221 FAM213BQ8TBF2 198 aa11.21□□□□□ -0.61
SPG7-213ENST00000566221 MLXQ9UH92 298 aa11.21□□□□□ -0.61
SPG7-213ENST00000566221 SORL1Q92673 2214 aa11.21□□□□□ -0.62
SPG7-213ENST00000566221 IGHV3-66A0A0C4DH42 116 aa11.2□□□□□ -0.62
SPG7-213ENST00000566221 CTXND1A0A1B0GTU2 59 aa11.2□□□□□ -0.62
SPG7-213ENST00000566221 A0A1W2PPV4 95 aa11.2□□□□□ -0.62
SPG7-213ENST00000566221 ZNF98A6NK75 572 aa11.2□□□□□ -0.62
SPG7-213ENST00000566221 CD5P06127 495 aa11.2□□□□□ -0.62
SPG7-213ENST00000566221 H2AFB1P0C5Y9 115 aa11.2□□□□□ -0.62
SPG7-213ENST00000566221 RHOBP62745 196 aa11.2□□□□□ -0.62
SPG7-213ENST00000566221 FAM78BQ5VT40 261 aa11.2□□□□□ -0.62
SPG7-213ENST00000566221 C16orf54Q6UWD8 224 aa11.2□□□□□ -0.62
SPG7-213ENST00000566221 GLMPQ8WWB7 406 aa11.2□□□□□ -0.62
SPG7-213ENST00000566221 GPR82Q96P67 336 aa11.2□□□□□ -0.62
SPG7-213ENST00000566221 SCRT1Q9BWW7 348 aa11.2□□□□□ -0.62
SPG7-213ENST00000566221 SLC25A22Q9H936 323 aa11.2□□□□□ -0.62
SPG7-213ENST00000566221 IGLL1P15814 213 aa11.19□□□□□ -0.62
SPG7-213ENST00000566221 LEMD1Q68G75 181 aa11.19□□□□□ -0.62
SPG7-213ENST00000566221 RPP25LQ8N5L8 163 aaKnown RBP11.19□□□□□ -0.62
SPG7-213ENST00000566221 OR2K2Q8NGT1 345 aa11.19□□□□□ -0.62
SPG7-213ENST00000566221 FUT9Q9Y231 359 aa11.19□□□□□ -0.62
SPG7-213ENST00000566221 MEGF8Q7Z7M0 2845 aa11.19□□□□□ -0.62
SPG7-213ENST00000566221 HELTA6NFD8 242 aa11.18□□□□□ -0.62
SPG7-213ENST00000566221 IGLV1-51P01701 117 aa11.18□□□□□ -0.62
SPG7-213ENST00000566221 CDC34P49427 236 aaPredicted RBP11.18□□□□□ -0.62
SPG7-213ENST00000566221 TAS2R45P59539 299 aa11.18□□□□□ -0.62
SPG7-213ENST00000566221 PMS2P11Q13670 270 aa11.18□□□□□ -0.62
SPG7-213ENST00000566221 DEFB114Q30KQ6 69 aa11.18□□□□□ -0.62
SPG7-213ENST00000566221 MORN5Q5VZ52 161 aa11.18□□□□□ -0.62
SPG7-213ENST00000566221 FAM122CQ6P4D5 195 aa11.18□□□□□ -0.62
SPG7-213ENST00000566221 OR8I2Q8N0Y5 310 aa11.18□□□□□ -0.62
SPG7-213ENST00000566221 SEPSECSQ9HD40 501 aaKnown RBP11.18□□□□□ -0.62
SPG7-213ENST00000566221 TRAV25A0A0B4J276 109 aa11.17□□□□□ -0.62
SPG7-213ENST00000566221 RPL7P18124 248 aaKnown RBP11.17□□□□□ -0.62
SPG7-213ENST00000566221 GALR1P47211 349 aa11.17□□□□□ -0.62
SPG7-213ENST00000566221 KHDC3LQ587J8 217 aa11.17□□□□□ -0.62
SPG7-213ENST00000566221 SPATA31B1PQ5VZV4 182 aa11.17□□□□□ -0.62
SPG7-213ENST00000566221 LCN12Q6JVE5 192 aa11.17□□□□□ -0.62
SPG7-213ENST00000566221 SIGLEC15Q6ZMC9 328 aa11.17□□□□□ -0.62
SPG7-213ENST00000566221 MIR17HGQ75NE6 70 aa11.17□□□□□ -0.62
SPG7-213ENST00000566221 TCF24Q7RTU0 167 aa11.17□□□□□ -0.62
SPG7-213ENST00000566221 SFT2D1Q8WV19 159 aa11.17□□□□□ -0.62
SPG7-213ENST00000566221 RAB24Q969Q5 203 aa11.17□□□□□ -0.62
SPG7-213ENST00000566221 TAGLN2P37802 199 aaKnown RBP11.16□□□□□ -0.62
SPG7-213ENST00000566221 FHITP49789 147 aa11.16□□□□□ -0.62
SPG7-213ENST00000566221 PPT1P50897 306 aa11.16□□□□□ -0.62
SPG7-213ENST00000566221 CD300EQ496F6 205 aaPredicted RBP11.16□□□□□ -0.62
SPG7-213ENST00000566221 FAM90A2PQ658T7 463 aa11.16□□□□□ -0.62
SPG7-213ENST00000566221 RBPMS2Q6ZRY4 209 aaKnown RBP11.16□□□□□ -0.62
SPG7-213ENST00000566221 BPIFA4PQ86YQ2 179 aa11.16□□□□□ -0.62
SPG7-213ENST00000566221 TMEM61Q8N0U2 210 aa11.16□□□□□ -0.62
SPG7-213ENST00000566221 STXBP6Q8NFX7 210 aa11.16□□□□□ -0.62
SPG7-213ENST00000566221 HRH4Q9H3N8 390 aa11.16□□□□□ -0.62
SPG7-213ENST00000566221 CMYA5Q8N3K9 4069 aa11.15□□□□□ -0.62
SPG7-213ENST00000566221 RAB19A4D1S5 217 aa11.15□□□□□ -0.62
SPG7-213ENST00000566221 MAP1LC3B2A6NCE7 125 aa11.15□□□□□ -0.62
SPG7-213ENST00000566221 STAG3L2P0CL84 134 aa11.15□□□□□ -0.62
SPG7-213ENST00000566221 STAG3L3P0CL85 134 aa11.15□□□□□ -0.62
SPG7-213ENST00000566221 ATF4P18848 351 aaPredicted RBP11.15□□□□□ -0.62
SPG7-213ENST00000566221 RPL11P62913 178 aaKnown RBP11.15□□□□□ -0.62
SPG7-213ENST00000566221 ZNF726P1Q15940 193 aa11.15□□□□□ -0.62
SPG7-213ENST00000566221 EIF4E3Q8N5X7 224 aaKnown RBP11.15□□□□□ -0.62
SPG7-213ENST00000566221 SLC25A2Q9BXI2 301 aa11.15□□□□□ -0.62
SPG7-213ENST00000566221 MAP1LC3BQ9GZQ8 125 aa11.15□□□□□ -0.62
SPG7-213ENST00000566221 TMEM14CQ9P0S9 112 aa11.15□□□□□ -0.62
SPG7-213ENST00000566221 SELENOKQ9Y6D0 94 aa11.15□□□□□ -0.62
SPG7-213ENST00000566221 TRAV5A0A0B4J249 113 aa11.14□□□□□ -0.63
SPG7-213ENST00000566221 TSPAN4O14817 238 aa11.14□□□□□ -0.63
SPG7-213ENST00000566221 OR7C2O60412 319 aa11.14□□□□□ -0.63
SPG7-213ENST00000566221 CXorf1O96002 111 aa11.14□□□□□ -0.63
SPG7-213ENST00000566221 GP9P14770 177 aa11.14□□□□□ -0.63
SPG7-213ENST00000566221 PSMB3P49720 205 aa11.14□□□□□ -0.63
SPG7-213ENST00000566221 MEOX2P50222 304 aa11.14□□□□□ -0.63
SPG7-213ENST00000566221 UQCC3Q6UW78 93 aa11.14□□□□□ -0.63
SPG7-213ENST00000566221 PQLC2Q6ZP29 291 aa11.14□□□□□ -0.63
SPG7-213ENST00000566221 FAM167A-AS1Q96KT0 104 aa11.14□□□□□ -0.63
SPG7-213ENST00000566221 SPAG8Q99932 426 aaPredicted RBP11.14□□□□□ -0.63
SPG7-213ENST00000566221 SMDT1Q9H4I9 107 aa11.14□□□□□ -0.63
SPG7-213ENST00000566221 NOTCH1P46531 2555 aa11.14□□□□□ -0.63
SPG7-213ENST00000566221 A0A087X0K7 114 aa11.13□□□□□ -0.63
SPG7-213ENST00000566221 TRAV2A0A0B4J234 112 aa11.13□□□□□ -0.63
SPG7-213ENST00000566221 MRPS12O15235 138 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms