RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ORM2P19652 201 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 APOBEC3AP31941 199 aaPredicted RBP13.06□□□□□ -0.32
LINC00554-201ENST00000564841 HSD52Q0P140 79 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 FLYWCH2Q96CP2 140 aaKnown RBP13.06□□□□□ -0.32
LINC00554-201ENST00000564841 SIGMAR1Q99720 223 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 ZNF257Q9Y2Q1 563 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 TEX50A0A1B0GTY4 177 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 M0R1B8 84 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 SPRY3O43610 288 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 IFI27P40305 119 aaPredicted RBP13.06□□□□□ -0.32
LINC00554-201ENST00000564841 TIMM23BQ5SRD1 257 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 C10orf113Q5VZT2 155 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 NPIPB3Q92617 1050 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 ADTRPQ96IZ2 230 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 A1L4Q6 167 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 CACNG7P62955 275 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 ADAMTSL5Q6ZMM2 481 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 LRBAP50851 2863 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 RNASE2P10153 161 aaKnown RBP13.05□□□□□ -0.32
LINC00554-201ENST00000564841 RAB9AP51151 201 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 WFDC2Q14508 124 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 PSG3Q16557 428 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 SH2D6Q7Z4S9 175 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 PRSS3P2Q8NHM4 247 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 GPR82Q96P67 336 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 A0A096LNJ9 63 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 ARMS2P0C7Q2 107 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 C10orf55Q5SWW7 151 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 FAM162BQ5T6X4 162 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 SAMD5Q5TGI4 173 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 LINC00305Q7Z4B0 112 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 NDFIP1Q9BT67 221 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 IGKV1D-17A0A075B6S4 117 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 IGHV3-21A0A0B4J1V1 117 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 IQCF6A8MYZ5 107 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 C22orf46C9J442 243 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 CD69Q07108 199 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 FAM27E3Q08E93 113 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 PRR30Q53SZ7 412 aaPredicted RBP13.04□□□□□ -0.32
LINC00554-201ENST00000564841 RBPMS2Q6ZRY4 209 aaKnown RBP13.04□□□□□ -0.32
LINC00554-201ENST00000564841 PRSS22Q9GZN4 317 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 FABP2P12104 132 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 GCSHP23434 173 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 CFHR2P36980 270 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 FXYD2P54710 66 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 BOD1L2Q8IYS8 172 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 MLST8Q9BVC4 326 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 FAM215AQ9Y5M1 114 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 TRAV26-1A0A087WT03 109 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 CEACAM4O75871 244 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 CCDC144NLQ6NUI1 221 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 INO80CQ6PI98 192 aaPredicted RBP13.03□□□□□ -0.32
LINC00554-201ENST00000564841 MOGAT3Q86VF5 341 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 DAZAP1Q96EP5 407 aaKnown RBP13.03□□□□□ -0.32
LINC00554-201ENST00000564841 MAP1AP78559 2803 aaPredicted RBP13.03□□□□□ -0.32
LINC00554-201ENST00000564841 GAGE12HA6NDE8 117 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 PRCDQ00LT1 54 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 Q6ZS92 163 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 ATP6V0BQ99437 205 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 SMAD7O15105 426 aaKnown RBP13.02□□□□□ -0.32
LINC00554-201ENST00000564841 APELAP0DMC3 54 aa13.02□□□□□ -0.32
LINC00554-201ENST00000564841 COL8A1P27658 744 aa13.02□□□□□ -0.32
LINC00554-201ENST00000564841 ATP5G2Q06055 141 aa13.02□□□□□ -0.32
LINC00554-201ENST00000564841 ZNF474Q6S9Z5 364 aaPredicted RBP13.02□□□□□ -0.32
LINC00554-201ENST00000564841 FA2HQ7L5A8 372 aa13.02□□□□□ -0.32
LINC00554-201ENST00000564841 PDPNQ86YL7 162 aa13.02□□□□□ -0.32
LINC00554-201ENST00000564841 JPT1Q9UK76 154 aa13.02□□□□□ -0.32
LINC00554-201ENST00000564841 LTAP01374 205 aa13.02□□□□□ -0.33
LINC00554-201ENST00000564841 INSL3P51460 131 aa13.02□□□□□ -0.33
LINC00554-201ENST00000564841 C22orf34Q6ZV56 151 aa13.02□□□□□ -0.33
LINC00554-201ENST00000564841 CXXC4Q9H2H0 198 aa13.02□□□□□ -0.33
LINC00554-201ENST00000564841 IGHV1-18A0A0C4DH31 117 aa13.02□□□□□ -0.33
LINC00554-201ENST00000564841 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.02□□□□□ -0.33
LINC00554-201ENST00000564841 C19orf71A6NCJ1 209 aa13.02□□□□□ -0.33
LINC00554-201ENST00000564841 FSTL3O95633 263 aa13.02□□□□□ -0.33
LINC00554-201ENST00000564841 ZCCHC24Q8N2G6 241 aaKnown RBP13.02□□□□□ -0.33
LINC00554-201ENST00000564841 MYCNOSP40205 109 aa13.01□□□□□ -0.33
LINC00554-201ENST00000564841 ASH1LQ9NR48 2969 aaKnown RBP13.01□□□□□ -0.33
LINC00554-201ENST00000564841 PLSCR4Q9NRQ2 329 aa13.01□□□□□ -0.33
LINC00554-201ENST00000564841 CALYQ9NYX4 217 aa13.01□□□□□ -0.33
LINC00554-201ENST00000564841 PRR7Q8TB68 274 aa13.01□□□□□ -0.33
LINC00554-201ENST00000564841 MRPL32Q9BYC8 188 aaKnown RBP13.01□□□□□ -0.33
LINC00554-201ENST00000564841 TMEM238LA0A1B0GVL6 79 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 hADV38S2A0JD32 116 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 UPK2O00526 184 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 SAA1P0DJI8 122 aaPredicted RBP13□□□□□ -0.33
LINC00554-201ENST00000564841 IGF2-ASQ6U949 168 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 AMTNQ6UX39 209 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 OR5A1Q8NGJ0 315 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 DKK2Q9UBU2 259 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 OVOL3O00110 214 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 PRB3Q04118 309 aaPredicted RBP13□□□□□ -0.33
LINC00554-201ENST00000564841 ETDBQ3ZM63 59 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 PRNTQ86SH4 94 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 ARPC1AQ92747 370 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 C19orf24Q9BVV8 132 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 SMPXQ9UHP9 88 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 IGKV1D-37A0A075B6S9 117 aa12.99□□□□□ -0.33
LINC00554-201ENST00000564841 IGKV3-15P01624 115 aa12.99□□□□□ -0.33
LINC00554-201ENST00000564841 IGKV2D-26A0A0A0MRZ7 120 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms