RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 TMPPEQ6ZT21 453 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 RPS19BP1Q86WX3 136 aaKnown RBP2.39□□□□□ -2.03
LINC00560-201ENST00000564593 TMEM251Q8N6I4 163 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.39□□□□□ -2.03
LINC00560-201ENST00000564593 OR2M3Q8NG83 312 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 OR51T1Q8NGJ9 327 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 OR10AC1Q8NH08 325 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 CASTOR1Q8WTX7 329 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 FXYD5Q96DB9 178 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 BORCS8Q96FH0 119 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 FMC1Q96HJ9 113 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 AMELYQ99218 206 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 SEC11CQ9BY50 192 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 NKX6-2Q9C056 277 aaPredicted RBP2.39□□□□□ -2.03
LINC00560-201ENST00000564593 RHOFQ9HBH0 211 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 ASF1BQ9NVP2 202 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 CARHSP1Q9Y2V2 147 aaKnown RBP2.39□□□□□ -2.03
LINC00560-201ENST00000564593 PRELID3BQ9Y3B1 194 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 LHFPL6Q9Y693 200 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 V9GYS6 101 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 TNRC6AQ8NDV7 1962 aaKnown RBP2.38□□□□□ -2.03
LINC00560-201ENST00000564593 TMEM218A2RU14 115 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 MEIS3P1A6NDR6 274 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 EEF1E1-BLOC1S5C9J1V9 151 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 F8W036 122 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 G3V3Q6 166 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 CDS2O95674 445 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 IGHG2P01859 326 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 IFNA4P05014 189 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 ZNF728P0DKX0 622 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 RPS27P42677 84 aaKnown RBP2.38□□□□□ -2.03
LINC00560-201ENST00000564593 RBP2P50120 134 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 S100A10P60903 97 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 RAB5BP61020 215 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 S100A12P80511 92 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 QRFPP83859 136 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 CD164Q04900 197 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 BAXQ07812 192 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 RAB31Q13636 194 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 TMEM176BQ3YBM2 270 aaPredicted RBP2.38□□□□□ -2.03
LINC00560-201ENST00000564593 OR10J3Q5JRS4 329 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 LDLRAD2Q5SZI1 272 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 FAM27BQ5VT28 67 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 DPPA3Q6W0C5 159 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 HIST2H3AQ71DI3 136 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 Q8IYB0 196 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 OR8B12Q8NGG6 310 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 OR5L1Q8NGL2 311 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 OR4C13Q8NGP0 309 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 OR13C8Q8NGS7 320 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 OR2K2Q8NGT1 345 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 CLDN23Q96B33 292 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 GNPNAT1Q96EK6 184 aaPredicted RBP2.38□□□□□ -2.03
LINC00560-201ENST00000564593 ADAT3Q96EY9 351 aaPredicted RBP2.38□□□□□ -2.03
LINC00560-201ENST00000564593 OR2V2Q96R30 315 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 CMSS1Q9BQ75 279 aaKnown RBP2.38□□□□□ -2.03
LINC00560-201ENST00000564593 SLC25A31Q9H0C2 315 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 LPAR5Q9H1C0 372 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 TAF9BQ9HBM6 251 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 BIN3Q9NQY0 253 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 MED29Q9NX70 200 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 RBM12B-AS1Q9P1G2 102 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 CACFD1Q9UGQ2 172 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 MCTS1Q9ULC4 181 aaKnown RBP2.38□□□□□ -2.03
LINC00560-201ENST00000564593 CNTRLQ7Z7A1 2325 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 NCKAP5O14513 1909 aa2.38□□□□□ -2.03
LINC00560-201ENST00000564593 IGHV1-45A0A0A0MS14 117 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 TRAV14DV4A0A0A6YYC5 116 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 CRYM-AS1A6NIL9 109 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 CD300LBA8K4G0 201 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 F5H5K5 113 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 CRXO43186 299 aaPredicted RBP2.37□□□□□ -2.03
LINC00560-201ENST00000564593 TGOLN2O43493 480 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 SYNGR1O43759 233 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 PDCD6O75340 191 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 SIX6O95475 246 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 CFDP00746 253 aaPredicted RBP2.37□□□□□ -2.03
LINC00560-201ENST00000564593 IFNA1P01562 189 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 IGLV3-1P01715 115 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 PMP2P02689 132 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 S100A8P05109 93 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 IGKV4-1P06312 121 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 SCGB1C2P0DMR2 95 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 HIST1H3AP68431 136 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 H3F3AP84243 136 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 FAM3AP98173 230 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 RHEBQ15382 184 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 TMEM241Q24JQ0 296 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 MPV17LQ2QL34 196 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 IAH1Q2TAA2 248 aaPredicted RBP2.37□□□□□ -2.03
LINC00560-201ENST00000564593 HIST2H3PS2Q5TEC6 136 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 Q6ZS49 121 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 AAED1Q7RTV5 226 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 LHFPL1Q86WI0 220 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 LYPD6Q86Y78 171 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 STX12Q86Y82 276 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 C20orf196Q8IYI0 205 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 OR4S1Q8NGB4 309 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 SCGB1C1Q8TD33 95 aa2.37□□□□□ -2.03
LINC00560-201ENST00000564593 CCL17Q92583 94 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms