RNA–Protein interactions for RNA: ENST00000564421.1

CPNE7-207, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-207ENST00000564421 SHANK2-AS3Q9BTD1 123 aa12.97□□□□□ -0.33
CPNE7-207ENST00000564421 MRPL32Q9BYC8 188 aaKnown RBP12.97□□□□□ -0.33
CPNE7-207ENST00000564421 SEPSECSQ9HD40 501 aaKnown RBP12.97□□□□□ -0.33
CPNE7-207ENST00000564421 U3KQE9 123 aa12.97□□□□□ -0.33
CPNE7-207ENST00000564421 ZNF98A6NK75 572 aa12.96□□□□□ -0.33
CPNE7-207ENST00000564421 BUB3O43684 328 aa12.96□□□□□ -0.33
CPNE7-207ENST00000564421 C8orf88P0DMB2 117 aa12.96□□□□□ -0.33
CPNE7-207ENST00000564421 BMI1P35226 326 aa12.96□□□□□ -0.33
CPNE7-207ENST00000564421 SPATA31B1PQ5VZV4 182 aa12.96□□□□□ -0.33
CPNE7-207ENST00000564421 TEX261Q6UWH6 196 aa12.96□□□□□ -0.33
CPNE7-207ENST00000564421 RPP25LQ8N5L8 163 aaKnown RBP12.96□□□□□ -0.33
CPNE7-207ENST00000564421 RHPN1-AS1Q9BWJ2 59 aa12.96□□□□□ -0.33
CPNE7-207ENST00000564421 SCRT1Q9BWW7 348 aa12.96□□□□□ -0.33
CPNE7-207ENST00000564421 ACTR3CQ9C0K3 210 aaPredicted RBP12.96□□□□□ -0.33
CPNE7-207ENST00000564421 SLC25A22Q9H936 323 aa12.96□□□□□ -0.33
CPNE7-207ENST00000564421 TECRQ9NZ01 308 aaKnown RBP12.96□□□□□ -0.33
CPNE7-207ENST00000564421 FUT9Q9Y231 359 aa12.96□□□□□ -0.33
CPNE7-207ENST00000564421 CDC34P49427 236 aaPredicted RBP12.95□□□□□ -0.34
CPNE7-207ENST00000564421 SULT1A2P50226 295 aa12.95□□□□□ -0.34
CPNE7-207ENST00000564421 RAB5CP51148 216 aa12.95□□□□□ -0.34
CPNE7-207ENST00000564421 FAM74A1Q5RGS3 127 aa12.95□□□□□ -0.34
CPNE7-207ENST00000564421 MORN5Q5VZ52 161 aa12.95□□□□□ -0.34
CPNE7-207ENST00000564421 LEMD1Q68G75 181 aa12.95□□□□□ -0.34
CPNE7-207ENST00000564421 MIR17HGQ75NE6 70 aa12.95□□□□□ -0.34
CPNE7-207ENST00000564421 GRAMD2BQ96HH9 432 aa12.95□□□□□ -0.34
CPNE7-207ENST00000564421 TMEM231Q9H6L2 316 aa12.95□□□□□ -0.34
CPNE7-207ENST00000564421 RNF24Q9Y225 148 aa12.95□□□□□ -0.34
CPNE7-207ENST00000564421 TRAV5A0A0B4J249 113 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 K7EIL1 84 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 CHEK1O14757 476 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 IFNA7P01567 189 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 GP9P14770 177 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 FHITP49789 147 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 LCN12Q6JVE5 192 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 C16orf54Q6UWD8 224 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 DPPA3Q6W0C5 159 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 OR8I2Q8N0Y5 310 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 ZNF680Q8NEM1 530 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 FAM213BQ8TBF2 198 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 MRAPQ8TCY5 172 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 DYNLRB2Q8TF09 96 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 RAB24Q969Q5 203 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 PRR25Q96S07 402 aa12.94□□□□□ -0.34
CPNE7-207ENST00000564421 HMGB3O15347 200 aaKnown RBP12.93□□□□□ -0.34
CPNE7-207ENST00000564421 EIF3GO75821 320 aaKnown RBP eCLIP12.93□□□□□ -0.34
CPNE7-207ENST00000564421 DEFB114Q30KQ6 69 aa12.93□□□□□ -0.34
CPNE7-207ENST00000564421 C1orf194Q5T5A4 169 aa12.93□□□□□ -0.34
CPNE7-207ENST00000564421 RNF141Q8WVD5 230 aa12.93□□□□□ -0.34
CPNE7-207ENST00000564421 SELENOKQ9Y6D0 94 aa12.93□□□□□ -0.34
CPNE7-207ENST00000564421 CTXND1A0A1B0GTU2 59 aa12.92□□□□□ -0.34
CPNE7-207ENST00000564421 TAS2R45P59539 299 aa12.92□□□□□ -0.34
CPNE7-207ENST00000564421 ZNF726P1Q15940 193 aa12.92□□□□□ -0.34
CPNE7-207ENST00000564421 GLMPQ8WWB7 406 aa12.92□□□□□ -0.34
CPNE7-207ENST00000564421 SLC25A2Q9BXI2 301 aa12.92□□□□□ -0.34
CPNE7-207ENST00000564421 MLXQ9UH92 298 aa12.92□□□□□ -0.34
CPNE7-207ENST00000564421 ZNF705EA8MWA4 302 aaPredicted RBP12.91□□□□□ -0.34
CPNE7-207ENST00000564421 RPL7P18124 248 aaKnown RBP12.91□□□□□ -0.34
CPNE7-207ENST00000564421 CD300EQ496F6 205 aaPredicted RBP12.91□□□□□ -0.34
CPNE7-207ENST00000564421 KHDC3LQ587J8 217 aa12.91□□□□□ -0.34
CPNE7-207ENST00000564421 SSX7Q7RTT5 188 aa12.91□□□□□ -0.34
CPNE7-207ENST00000564421 BPIFA4PQ86YQ2 179 aa12.91□□□□□ -0.34
CPNE7-207ENST00000564421 FAM167A-AS1Q96KT0 104 aa12.91□□□□□ -0.34
CPNE7-207ENST00000564421 GPR82Q96P67 336 aa12.91□□□□□ -0.34
CPNE7-207ENST00000564421 UBQLN2Q9UHD9 624 aa12.91□□□□□ -0.34
CPNE7-207ENST00000564421 OR7C2O60412 319 aa12.9□□□□□ -0.34
CPNE7-207ENST00000564421 STAG3L2P0CL84 134 aa12.9□□□□□ -0.34
CPNE7-207ENST00000564421 STAG3L3P0CL85 134 aa12.9□□□□□ -0.34
CPNE7-207ENST00000564421 RPL11P62913 178 aaKnown RBP12.9□□□□□ -0.34
CPNE7-207ENST00000564421 IFITM2Q01629 132 aa12.9□□□□□ -0.34
CPNE7-207ENST00000564421 LCN15Q6UWW0 184 aa12.9□□□□□ -0.34
CPNE7-207ENST00000564421 SIGLEC15Q6ZMC9 328 aa12.9□□□□□ -0.34
CPNE7-207ENST00000564421 TCF24Q7RTU0 167 aa12.9□□□□□ -0.34
CPNE7-207ENST00000564421 STXBP6Q8NFX7 210 aa12.9□□□□□ -0.34
CPNE7-207ENST00000564421 TRAV25A0A0B4J276 109 aa12.89□□□□□ -0.35
CPNE7-207ENST00000564421 MAP1LC3B2A6NCE7 125 aa12.89□□□□□ -0.35
CPNE7-207ENST00000564421 IZUMO1RA6ND01 250 aa12.89□□□□□ -0.35
CPNE7-207ENST00000564421 HELTA6NFD8 242 aa12.89□□□□□ -0.35
CPNE7-207ENST00000564421 H2AFB1P0C5Y9 115 aa12.89□□□□□ -0.35
CPNE7-207ENST00000564421 GALR1P47211 349 aa12.89□□□□□ -0.35
CPNE7-207ENST00000564421 SFT2D1Q8WV19 159 aa12.89□□□□□ -0.35
CPNE7-207ENST00000564421 PAXXQ9BUH6 204 aa12.89□□□□□ -0.35
CPNE7-207ENST00000564421 MAP1LC3BQ9GZQ8 125 aa12.89□□□□□ -0.35
CPNE7-207ENST00000564421 OR51M1Q9H341 326 aa12.89□□□□□ -0.35
CPNE7-207ENST00000564421 ZNF785A8K8V0 405 aa12.88□□□□□ -0.35
CPNE7-207ENST00000564421 CXorf1O96002 111 aa12.88□□□□□ -0.35
CPNE7-207ENST00000564421 CD5P06127 495 aa12.88□□□□□ -0.35
CPNE7-207ENST00000564421 ARL14EPLP0DKL9 152 aa12.88□□□□□ -0.35
CPNE7-207ENST00000564421 PYYP10082 97 aa12.88□□□□□ -0.35
CPNE7-207ENST00000564421 ATF4P18848 351 aaPredicted RBP12.88□□□□□ -0.35
CPNE7-207ENST00000564421 PQLC2Q6ZP29 291 aa12.88□□□□□ -0.35
CPNE7-207ENST00000564421 LRRC20Q8TCA0 184 aa12.88□□□□□ -0.35
CPNE7-207ENST00000564421 MBD3L1Q8WWY6 194 aa12.88□□□□□ -0.35
CPNE7-207ENST00000564421 TMEM14CQ9P0S9 112 aa12.88□□□□□ -0.35
CPNE7-207ENST00000564421 PRKDCP78527 4128 aaKnown RBP12.88□□□□□ -0.35
CPNE7-207ENST00000564421 IGKV3-7A0A075B6H7 116 aa12.87□□□□□ -0.35
CPNE7-207ENST00000564421 MRPS12O15235 138 aaKnown RBP12.87□□□□□ -0.35
CPNE7-207ENST00000564421 OR10J4P0C629 311 aa12.87□□□□□ -0.35
CPNE7-207ENST00000564421 FGF8P55075 233 aaPredicted RBP12.87□□□□□ -0.35
CPNE7-207ENST00000564421 BLOC1S1P78537 153 aa12.87□□□□□ -0.35
CPNE7-207ENST00000564421 DEFB121Q5J5C9 76 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms