RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 BTF3L4Q96K17 158 aa14.9□□□□□ -0.02
SMPD3-203ENST00000563226 SERTAD4Q9NUC0 356 aa14.9□□□□□ -0.02
SMPD3-203ENST00000563226 KLK9Q9UKQ9 250 aa14.9□□□□□ -0.02
SMPD3-203ENST00000563226 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.9□□□□□ -0.02
SMPD3-203ENST00000563226 POLQO75417 2590 aa14.9□□□□□ -0.02
SMPD3-203ENST00000563226 TRBV9A0A0B4J1U6 114 aa14.89□□□□□ -0.03
SMPD3-203ENST00000563226 GPR183P32249 361 aa14.89□□□□□ -0.03
SMPD3-203ENST00000563226 LY6EQ16553 131 aa14.89□□□□□ -0.03
SMPD3-203ENST00000563226 PRR27Q6MZM9 219 aa14.89□□□□□ -0.03
SMPD3-203ENST00000563226 VN1R17PQ8TDU5 208 aa14.89□□□□□ -0.03
SMPD3-203ENST00000563226 LINC00527Q9UJ94 153 aa14.89□□□□□ -0.03
SMPD3-203ENST00000563226 TRAV9-1A0A075B6T8 112 aa14.89□□□□□ -0.03
SMPD3-203ENST00000563226 IGHV3OR16-8A0A075B7F1 116 aa14.89□□□□□ -0.03
SMPD3-203ENST00000563226 B4DSR2 109 aa14.89□□□□□ -0.03
SMPD3-203ENST00000563226 CBLN1P23435 193 aa14.89□□□□□ -0.03
SMPD3-203ENST00000563226 COL8A1P27658 744 aa14.89□□□□□ -0.03
SMPD3-203ENST00000563226 Q71RC1 249 aaPredicted RBP14.89□□□□□ -0.03
SMPD3-203ENST00000563226 OR4F17Q8NGA8 305 aa14.89□□□□□ -0.03
SMPD3-203ENST00000563226 MS4A10Q96PG2 267 aa14.89□□□□□ -0.03
SMPD3-203ENST00000563226 TRAV8-1A0A0A6YYK1 113 aa14.88□□□□□ -0.03
SMPD3-203ENST00000563226 ZNF705GA8MUZ8 300 aaPredicted RBP14.88□□□□□ -0.03
SMPD3-203ENST00000563226 SPINK4O60575 86 aa14.88□□□□□ -0.03
SMPD3-203ENST00000563226 DSCR9P59020 149 aa14.88□□□□□ -0.03
SMPD3-203ENST00000563226 KRTAP10-9P60411 292 aa14.88□□□□□ -0.03
SMPD3-203ENST00000563226 SIGLEC15Q6ZMC9 328 aa14.88□□□□□ -0.03
SMPD3-203ENST00000563226 TXN2Q99757 166 aa14.88□□□□□ -0.03
SMPD3-203ENST00000563226 PITPNC1Q9UKF7 332 aa14.88□□□□□ -0.03
SMPD3-203ENST00000563226 CENPEQ02224 2701 aa14.88□□□□□ -0.03
SMPD3-203ENST00000563226 XKRY2A2RUG3 117 aa14.88□□□□□ -0.03
SMPD3-203ENST00000563226 SLC35B1P78383 322 aa14.88□□□□□ -0.03
SMPD3-203ENST00000563226 NUDT10Q8NFP7 164 aa14.88□□□□□ -0.03
SMPD3-203ENST00000563226 NUDT11Q96G61 164 aa14.88□□□□□ -0.03
SMPD3-203ENST00000563226 CCDC140Q96MF4 163 aa14.88□□□□□ -0.03
SMPD3-203ENST00000563226 A0A096LNT2 108 aa14.87□□□□□ -0.03
SMPD3-203ENST00000563226 H3BUX3 64 aa14.87□□□□□ -0.03
SMPD3-203ENST00000563226 SMIM6P0DI80 62 aa14.87□□□□□ -0.03
SMPD3-203ENST00000563226 FMC1Q96HJ9 113 aa14.87□□□□□ -0.03
SMPD3-203ENST00000563226 GPR82Q96P67 336 aa14.87□□□□□ -0.03
SMPD3-203ENST00000563226 MLST8Q9BVC4 326 aa14.87□□□□□ -0.03
SMPD3-203ENST00000563226 PCP4L1A6NKN8 68 aa14.86□□□□□ -0.03
SMPD3-203ENST00000563226 LTAP01374 205 aa14.86□□□□□ -0.03
SMPD3-203ENST00000563226 C19orf54Q5BKX5 351 aa14.86□□□□□ -0.03
SMPD3-203ENST00000563226 LINC00322Q6ZN03 302 aaPredicted RBP14.86□□□□□ -0.03
SMPD3-203ENST00000563226 GOLT1AQ6ZVE7 132 aa14.86□□□□□ -0.03
SMPD3-203ENST00000563226 FAM231DQ6ZW35 169 aa14.86□□□□□ -0.03
SMPD3-203ENST00000563226 MAPK1IP1LQ8NDC0 245 aa14.86□□□□□ -0.03
SMPD3-203ENST00000563226 MBD6Q96DN6 1003 aa14.86□□□□□ -0.03
SMPD3-203ENST00000563226 GAR1Q9NY12 217 aaKnown RBP14.86□□□□□ -0.03
SMPD3-203ENST00000563226 SMIM27A0A1W2PRY6 76 aa14.86□□□□□ -0.03
SMPD3-203ENST00000563226 IGLV2-11P01706 119 aa14.86□□□□□ -0.03
SMPD3-203ENST00000563226 CLEC3BP05452 202 aa14.86□□□□□ -0.03
SMPD3-203ENST00000563226 SLC25A16P16260 332 aa14.86□□□□□ -0.03
SMPD3-203ENST00000563226 C9orf152Q5JTZ5 239 aa14.86□□□□□ -0.03
SMPD3-203ENST00000563226 CMTM2Q8TAZ6 248 aa14.86□□□□□ -0.03
SMPD3-203ENST00000563226 IER3P46695 156 aa14.85□□□□□ -0.03
SMPD3-203ENST00000563226 TMEM183AQ8IXX5 376 aa14.85□□□□□ -0.03
SMPD3-203ENST00000563226 TRAV41A0A0B4J266 112 aa14.85□□□□□ -0.03
SMPD3-203ENST00000563226 A6NDX4 124 aa14.85□□□□□ -0.03
SMPD3-203ENST00000563226 GATCO43716 136 aaKnown RBP14.85□□□□□ -0.03
SMPD3-203ENST00000563226 S100A9P06702 114 aaKnown RBP14.85□□□□□ -0.03
SMPD3-203ENST00000563226 COA6Q5JTJ3 125 aaKnown RBP14.85□□□□□ -0.03
SMPD3-203ENST00000563226 CLEC19AQ6UXS0 136 aa14.85□□□□□ -0.03
SMPD3-203ENST00000563226 Q86TA4 180 aa14.85□□□□□ -0.03
SMPD3-203ENST00000563226 FABP4P15090 132 aa14.84□□□□□ -0.03
SMPD3-203ENST00000563226 TOMM20LQ6UXN7 152 aa14.84□□□□□ -0.03
SMPD3-203ENST00000563226 OR10D4PQ8NGN7 298 aa14.84□□□□□ -0.03
SMPD3-203ENST00000563226 RABAC1Q9UI14 185 aa14.84□□□□□ -0.03
SMPD3-203ENST00000563226 TRAV20A0A0B4J274 112 aa14.83□□□□□ -0.03
SMPD3-203ENST00000563226 A0A1B0GUS0 222 aa14.83□□□□□ -0.03
SMPD3-203ENST00000563226 M0R3E3 92 aa14.83□□□□□ -0.03
SMPD3-203ENST00000563226 SCGB2A1O75556 95 aa14.83□□□□□ -0.03
SMPD3-203ENST00000563226 S100A2P29034 98 aa14.83□□□□□ -0.03
SMPD3-203ENST00000563226 ASCL2Q99929 193 aa14.83□□□□□ -0.03
SMPD3-203ENST00000563226 MRPL18Q9H0U6 180 aaKnown RBP14.83□□□□□ -0.03
SMPD3-203ENST00000563226 ZFAND3Q9H8U3 227 aa14.83□□□□□ -0.03
SMPD3-203ENST00000563226 RNF24Q9Y225 148 aa14.83□□□□□ -0.03
SMPD3-203ENST00000563226 MRPL54Q6P161 138 aaKnown RBP14.83□□□□□ -0.04
SMPD3-203ENST00000563226 PRNTQ86SH4 94 aa14.83□□□□□ -0.04
SMPD3-203ENST00000563226 SMIM12Q96EX1 92 aa14.83□□□□□ -0.04
SMPD3-203ENST00000563226 HIST1H2BLQ99880 126 aa14.83□□□□□ -0.04
SMPD3-203ENST00000563226 GNB4Q9HAV0 340 aa14.83□□□□□ -0.04
SMPD3-203ENST00000563226 USP9YO00507 2555 aaPredicted RBP14.82□□□□□ -0.04
SMPD3-203ENST00000563226 SNURFLB1AK76 121 aa14.82□□□□□ -0.04
SMPD3-203ENST00000563226 CRIP2P52943 208 aaPredicted RBP14.82□□□□□ -0.04
SMPD3-203ENST00000563226 S100A7AQ86SG5 101 aa14.82□□□□□ -0.04
SMPD3-203ENST00000563226 CIARTQ8N365 385 aaPredicted RBP14.82□□□□□ -0.04
SMPD3-203ENST00000563226 GRAMD2BQ96HH9 432 aa14.82□□□□□ -0.04
SMPD3-203ENST00000563226 PTPN13Q12923 2485 aa14.82□□□□□ -0.04
SMPD3-203ENST00000563226 CSPG4Q6UVK1 2322 aa14.82□□□□□ -0.04
SMPD3-203ENST00000563226 ZANQ9Y493 2812 aa14.82□□□□□ -0.04
SMPD3-203ENST00000563226 Q6ZS46 218 aa14.81□□□□□ -0.04
SMPD3-203ENST00000563226 LYPD1Q8N2G4 141 aa14.81□□□□□ -0.04
SMPD3-203ENST00000563226 LINC01356Q8N9X3 169 aa14.81□□□□□ -0.04
SMPD3-203ENST00000563226 EEF1AKMT3Q96AZ1 226 aa14.81□□□□□ -0.04
SMPD3-203ENST00000563226 SMAD5-AS1Q9Y6J3 95 aa14.81□□□□□ -0.04
SMPD3-203ENST00000563226 BMPR1BO00238 502 aa14.81□□□□□ -0.04
SMPD3-203ENST00000563226 PYY3Q5JQD4 70 aa14.81□□□□□ -0.04
SMPD3-203ENST00000563226 NOL4LQ96MY1 436 aaPredicted RBP14.81□□□□□ -0.04
SMPD3-203ENST00000563226 IZUMO1RA6ND01 250 aa14.8□□□□□ -0.04
SMPD3-203ENST00000563226 BLCAPP62952 87 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms