RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 CYCSP99999 105 aaKnown RBP11.24□□□□□ -0.61
CCNDBP1-203ENST00000562553 EWSR1Q01844 656 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCNDBP1-203ENST00000562553 NHLH2Q02577 135 aa11.24□□□□□ -0.61
CCNDBP1-203ENST00000562553 GDF5OSQ5U4N7 250 aa11.24□□□□□ -0.61
CCNDBP1-203ENST00000562553 PPP1R1CQ8WVI7 109 aa11.24□□□□□ -0.61
CCNDBP1-203ENST00000562553 C20orf173Q96LM9 149 aa11.24□□□□□ -0.61
CCNDBP1-203ENST00000562553 ARV1Q9H2C2 271 aa11.24□□□□□ -0.61
CCNDBP1-203ENST00000562553 A0A0J9YWU9 116 aa11.23□□□□□ -0.61
CCNDBP1-203ENST00000562553 H3BMM0 161 aa11.23□□□□□ -0.61
CCNDBP1-203ENST00000562553 RLN2P04090 185 aa11.23□□□□□ -0.61
CCNDBP1-203ENST00000562553 ID1P41134 155 aa11.23□□□□□ -0.61
CCNDBP1-203ENST00000562553 HBG1P69891 147 aa11.23□□□□□ -0.61
CCNDBP1-203ENST00000562553 HBG2P69892 147 aa11.23□□□□□ -0.61
CCNDBP1-203ENST00000562553 MIC13Q5XKP0 118 aa11.23□□□□□ -0.61
CCNDBP1-203ENST00000562553 GPR82Q96P67 336 aa11.23□□□□□ -0.61
CCNDBP1-203ENST00000562553 RNF126Q9BV68 326 aa11.23□□□□□ -0.61
CCNDBP1-203ENST00000562553 SACSQ9NZJ4 4579 aa11.23□□□□□ -0.61
CCNDBP1-203ENST00000562553 ISLRO14498 428 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 SPP1P10451 314 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 HLA-DRB4P13762 266 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 S100A7P31151 101 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 MEOX2P50222 304 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 PRR20EP86478 221 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 PRR20CP86479 221 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 PRR20DP86480 221 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 PRR20BP86481 221 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 PRR20AP86496 221 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 BAXQ07812 192 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 PLECQ15149 4684 aaKnown RBP11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 PXDC1Q5TGL8 231 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 MORN5Q5VZ52 161 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 GATAD1Q8WUU5 269 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 TMEM37Q8WXS4 190 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 C16orf92Q96LL3 132 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 LYSTQ99698 3801 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 HLA-DRB4X5D2U9 266 aa11.22□□□□□ -0.61
CCNDBP1-203ENST00000562553 F6UB75 175 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 MRPS12O15235 138 aaKnown RBP11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 COX7A2P2O60397 106 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 MPC2O95563 127 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 RPL7P18124 248 aaKnown RBP11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 CXCL3P19876 107 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 FGF7P21781 194 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 FGL1Q08830 312 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 RAB31Q13636 194 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 OPCMLQ14982 345 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 ATP6V1FQ16864 119 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 IGFL4Q6B9Z1 124 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 MORN3Q6PF18 240 aaPredicted RBP11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 LINC00305Q7Z4B0 112 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 OR5C1Q8NGR4 320 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 OR11H2Q8NH07 326 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 RARRES2Q99969 163 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 SLC25A31Q9H0C2 315 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 SAV1Q9H4B6 383 aaPredicted RBP11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 CLEC5AQ9NY25 188 aa11.21□□□□□ -0.61
CCNDBP1-203ENST00000562553 TRAV8-2A0A0B4J237 113 aa11.2□□□□□ -0.62
CCNDBP1-203ENST00000562553 LCE6AA0A183 80 aa11.2□□□□□ -0.62
CCNDBP1-203ENST00000562553 IGKV3-20P01619 116 aa11.2□□□□□ -0.62
CCNDBP1-203ENST00000562553 ATF4P18848 351 aaPredicted RBP11.2□□□□□ -0.62
CCNDBP1-203ENST00000562553 CLINT1Q14677 625 aa11.2□□□□□ -0.62
CCNDBP1-203ENST00000562553 FOXI2Q6ZQN5 318 aa11.2□□□□□ -0.62
CCNDBP1-203ENST00000562553 THAP6Q8TBB0 222 aa11.2□□□□□ -0.62
CCNDBP1-203ENST00000562553 A0A087X0K7 114 aa11.19□□□□□ -0.62
CCNDBP1-203ENST00000562553 SNRPCP09234 159 aaKnown RBP11.19□□□□□ -0.62
CCNDBP1-203ENST00000562553 RPL29P47914 159 aaKnown RBP11.19□□□□□ -0.62
CCNDBP1-203ENST00000562553 B2MP61769 119 aa11.19□□□□□ -0.62
CCNDBP1-203ENST00000562553 FCN2Q15485 313 aa11.19□□□□□ -0.62
CCNDBP1-203ENST00000562553 SAMD13Q5VXD3 122 aa11.19□□□□□ -0.62
CCNDBP1-203ENST00000562553 C10orf113Q5VZT2 155 aa11.19□□□□□ -0.62
CCNDBP1-203ENST00000562553 RNF182Q8N6D2 247 aa11.19□□□□□ -0.62
CCNDBP1-203ENST00000562553 CSNK1G2-AS1Q8NCQ2 148 aa11.19□□□□□ -0.62
CCNDBP1-203ENST00000562553 IL17DQ8TAD2 202 aa11.19□□□□□ -0.62
CCNDBP1-203ENST00000562553 SLC39A9Q9NUM3 307 aa11.19□□□□□ -0.62
CCNDBP1-203ENST00000562553 MBD2Q9UBB5 411 aa11.19□□□□□ -0.62
CCNDBP1-203ENST00000562553 PXMP4Q9Y6I8 212 aa11.19□□□□□ -0.62
CCNDBP1-203ENST00000562553 ELOA3CA0A087WX78 387 aaPredicted RBP11.18□□□□□ -0.62
CCNDBP1-203ENST00000562553 HLA-DMBP28068 263 aa11.18□□□□□ -0.62
CCNDBP1-203ENST00000562553 FXYD7P58549 80 aa11.18□□□□□ -0.62
CCNDBP1-203ENST00000562553 TMEM41BQ5BJD5 291 aa11.18□□□□□ -0.62
CCNDBP1-203ENST00000562553 Q6ZRG5 221 aa11.18□□□□□ -0.62
CCNDBP1-203ENST00000562553 S100A7AQ86SG5 101 aa11.18□□□□□ -0.62
CCNDBP1-203ENST00000562553 OR11H7Q8NGC8 314 aa11.18□□□□□ -0.62
CCNDBP1-203ENST00000562553 CHAC2Q8WUX2 184 aa11.18□□□□□ -0.62
CCNDBP1-203ENST00000562553 NPCDR1Q9BY65 106 aa11.18□□□□□ -0.62
CCNDBP1-203ENST00000562553 DNAJC4Q9NNZ3 241 aa11.18□□□□□ -0.62
CCNDBP1-203ENST00000562553 RPRMQ9NS64 109 aa11.18□□□□□ -0.62
CCNDBP1-203ENST00000562553 XCL2Q9UBD3 114 aa11.18□□□□□ -0.62
CCNDBP1-203ENST00000562553 TRAV5A0A0B4J249 113 aa11.17□□□□□ -0.62
CCNDBP1-203ENST00000562553 A0A0J9YX75 114 aa11.17□□□□□ -0.62
CCNDBP1-203ENST00000562553 DEFB4AO15263 64 aa11.17□□□□□ -0.62
CCNDBP1-203ENST00000562553 MPDU1O75352 247 aa11.17□□□□□ -0.62
CCNDBP1-203ENST00000562553 PET100P0DJ07 73 aa11.17□□□□□ -0.62
CCNDBP1-203ENST00000562553 FAM78BQ5VT40 261 aa11.17□□□□□ -0.62
CCNDBP1-203ENST00000562553 OR4B1Q8NGF8 309 aa11.17□□□□□ -0.62
CCNDBP1-203ENST00000562553 HSPB11Q9Y547 144 aa11.17□□□□□ -0.62
CCNDBP1-203ENST00000562553 H3BTX0 84 aa11.16□□□□□ -0.62
CCNDBP1-203ENST00000562553 PRB4P10163 310 aaPredicted RBP11.16□□□□□ -0.62
CCNDBP1-203ENST00000562553 GCSAMLQ5JQS6 135 aa11.16□□□□□ -0.62
CCNDBP1-203ENST00000562553 EBLN2Q6P2I7 272 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms