RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 SIGLEC8Q9NYZ4 499 aa13.16□□□□□ -0.3
TPM1-228ENST00000560975 RAI1Q7Z5J4 1906 aaPredicted RBP13.16□□□□□ -0.3
TPM1-228ENST00000560975 LYZP61626 148 aa13.15□□□□□ -0.3
TPM1-228ENST00000560975 ZNF833PQ6ZTB9 187 aa13.15□□□□□ -0.3
TPM1-228ENST00000560975 RPRMLQ8N4K4 120 aa13.15□□□□□ -0.3
TPM1-228ENST00000560975 RNF7Q9UBF6 113 aa13.15□□□□□ -0.3
TPM1-228ENST00000560975 RP1L1Q8IWN7 2480 aaPredicted RBP13.15□□□□□ -0.3
TPM1-228ENST00000560975 ZDBF2Q9HCK1 2354 aa13.15□□□□□ -0.3
TPM1-228ENST00000560975 PPIAL4CA0A0B4J2A2 164 aa13.15□□□□□ -0.3
TPM1-228ENST00000560975 IGLV2-11P01706 119 aa13.15□□□□□ -0.3
TPM1-228ENST00000560975 PPIAL4GP0DN37 164 aa13.15□□□□□ -0.3
TPM1-228ENST00000560975 SMAGPQ0VAQ4 97 aa13.15□□□□□ -0.3
TPM1-228ENST00000560975 TMEM167AQ8TBQ9 72 aa13.15□□□□□ -0.3
TPM1-228ENST00000560975 RITA1Q96K30 269 aa13.15□□□□□ -0.3
TPM1-228ENST00000560975 GCSHP23434 173 aa13.14□□□□□ -0.31
TPM1-228ENST00000560975 OR5A1Q8NGJ0 315 aa13.14□□□□□ -0.31
TPM1-228ENST00000560975 ABHD17AQ96GS6 310 aa13.14□□□□□ -0.31
TPM1-228ENST00000560975 IGHV3-72A0A0B4J1Y9 119 aa13.14□□□□□ -0.31
TPM1-228ENST00000560975 APOBEC3AP31941 199 aaPredicted RBP13.14□□□□□ -0.31
TPM1-228ENST00000560975 SAMD5Q5TGI4 173 aa13.14□□□□□ -0.31
TPM1-228ENST00000560975 TTTY13Q9BZ97 58 aa13.14□□□□□ -0.31
TPM1-228ENST00000560975 GPR179Q6PRD1 2367 aa13.14□□□□□ -0.31
TPM1-228ENST00000560975 NKX2-8O15522 239 aa13.14□□□□□ -0.31
TPM1-228ENST00000560975 AZU1P20160 251 aa13.14□□□□□ -0.31
TPM1-228ENST00000560975 OR9G4Q8NGQ1 327 aa13.14□□□□□ -0.31
TPM1-228ENST00000560975 FAM222BQ8WU58 562 aa13.14□□□□□ -0.31
TPM1-228ENST00000560975 TMEM213A2RRL7 107 aa13.13□□□□□ -0.31
TPM1-228ENST00000560975 K7ERJ3 54 aa13.13□□□□□ -0.31
TPM1-228ENST00000560975 ENSAO43768 121 aaKnown RBP13.13□□□□□ -0.31
TPM1-228ENST00000560975 FCGR2BP31994 310 aaPredicted RBP13.13□□□□□ -0.31
TPM1-228ENST00000560975 TIMM23BQ5SRD1 257 aa13.13□□□□□ -0.31
TPM1-228ENST00000560975 AMN1Q8IY45 258 aa13.13□□□□□ -0.31
TPM1-228ENST00000560975 OR4C13Q8NGP0 309 aa13.13□□□□□ -0.31
TPM1-228ENST00000560975 OR10X1Q8NGY0 326 aa13.13□□□□□ -0.31
TPM1-228ENST00000560975 ZNF414Q96IQ9 312 aa13.13□□□□□ -0.31
TPM1-228ENST00000560975 K7EMI3 77 aa13.13□□□□□ -0.31
TPM1-228ENST00000560975 TNFRSF1AP19438 455 aa13.13□□□□□ -0.31
TPM1-228ENST00000560975 LGALS9BQ3B8N2 356 aa13.13□□□□□ -0.31
TPM1-228ENST00000560975 LGALS9CQ6DKI2 356 aa13.13□□□□□ -0.31
TPM1-228ENST00000560975 OR4X2Q8NGF9 303 aa13.13□□□□□ -0.31
TPM1-228ENST00000560975 C17orf77Q96MU5 243 aa13.13□□□□□ -0.31
TPM1-228ENST00000560975 OTORQ9NRC9 128 aa13.13□□□□□ -0.31
TPM1-228ENST00000560975 DKK2Q9UBU2 259 aa13.13□□□□□ -0.31
TPM1-228ENST00000560975 UBALD2Q8IYN6 164 aa13.12□□□□□ -0.31
TPM1-228ENST00000560975 PRELID3AQ96N28 172 aa13.12□□□□□ -0.31
TPM1-228ENST00000560975 HIGD1AQ9Y241 93 aa13.12□□□□□ -0.31
TPM1-228ENST00000560975 SMKR1H3BMG3 65 aa13.12□□□□□ -0.31
TPM1-228ENST00000560975 TNFAIP6P98066 277 aaPredicted RBP13.12□□□□□ -0.31
TPM1-228ENST00000560975 TMEM178AQ8NBL3 297 aa13.12□□□□□ -0.31
TPM1-228ENST00000560975 C1orf162Q8NEQ5 155 aaPredicted RBP13.12□□□□□ -0.31
TPM1-228ENST00000560975 C8orf46Q8TAG6 207 aa13.12□□□□□ -0.31
TPM1-228ENST00000560975 DPF1Q92782 380 aa13.12□□□□□ -0.31
TPM1-228ENST00000560975 C18orf15Q96N68 181 aa13.12□□□□□ -0.31
TPM1-228ENST00000560975 NCOR1O75376 2440 aa13.12□□□□□ -0.31
TPM1-228ENST00000560975 SMIM13P0DJ93 91 aa13.11□□□□□ -0.31
TPM1-228ENST00000560975 FXYD2P54710 66 aa13.11□□□□□ -0.31
TPM1-228ENST00000560975 TMEM164Q5U3C3 297 aa13.11□□□□□ -0.31
TPM1-228ENST00000560975 M0R296 226 aa13.11□□□□□ -0.31
TPM1-228ENST00000560975 ZNF788Q6ZQV5 615 aa13.11□□□□□ -0.31
TPM1-228ENST00000560975 TRGV9Q99603 122 aa13.11□□□□□ -0.31
TPM1-228ENST00000560975 COL25A1Q9BXS0 654 aaPredicted RBP13.11□□□□□ -0.31
TPM1-228ENST00000560975 INS-IGF2F8WCM5 200 aa13.1□□□□□ -0.31
TPM1-228ENST00000560975 IGLV2-23P01705 113 aa13.1□□□□□ -0.31
TPM1-228ENST00000560975 PSG3Q16557 428 aa13.1□□□□□ -0.31
TPM1-228ENST00000560975 IFI27L1Q96BM0 104 aa13.1□□□□□ -0.31
TPM1-228ENST00000560975 FER1L6-AS2Q96M78 137 aa13.1□□□□□ -0.31
TPM1-228ENST00000560975 CRIP1P50238 77 aa13.1□□□□□ -0.31
TPM1-228ENST00000560975 C16orf54Q6UWD8 224 aa13.1□□□□□ -0.31
TPM1-228ENST00000560975 DHRS13Q6UX07 377 aa13.1□□□□□ -0.31
TPM1-228ENST00000560975 BCL6BQ8N143 479 aaPredicted RBP13.1□□□□□ -0.31
TPM1-228ENST00000560975 A0A1W2PRD5 423 aa13.1□□□□□ -0.31
TPM1-228ENST00000560975 A0A1W2PRF3 423 aa13.1□□□□□ -0.31
TPM1-228ENST00000560975 A0A1W2PRM7 423 aa13.1□□□□□ -0.31
TPM1-228ENST00000560975 Q5PR19 223 aa13.1□□□□□ -0.31
TPM1-228ENST00000560975 ZNF71Q9NQZ8 489 aaPredicted RBP13.1□□□□□ -0.31
TPM1-228ENST00000560975 SLC25A15Q9Y619 301 aa13.1□□□□□ -0.31
TPM1-228ENST00000560975 TM4SF5O14894 197 aa13.09□□□□□ -0.31
TPM1-228ENST00000560975 HBDP02042 147 aa13.09□□□□□ -0.31
TPM1-228ENST00000560975 LYZL1Q6UWQ5 148 aa13.09□□□□□ -0.31
TPM1-228ENST00000560975 SMIM17P0DL12 118 aa13.09□□□□□ -0.31
TPM1-228ENST00000560975 TNFRSF14Q92956 283 aa13.09□□□□□ -0.31
TPM1-228ENST00000560975 C8orf49Q96NF6 230 aa13.09□□□□□ -0.31
TPM1-228ENST00000560975 SLC25A39Q9BZJ4 359 aaPredicted RBP13.09□□□□□ -0.31
TPM1-228ENST00000560975 PROCRQ9UNN8 238 aa13.09□□□□□ -0.31
TPM1-228ENST00000560975 PSG8Q9UQ74 426 aa13.09□□□□□ -0.31
TPM1-228ENST00000560975 TSSC4Q9Y5U2 329 aaPredicted RBP13.09□□□□□ -0.31
TPM1-228ENST00000560975 SIVA1O15304 175 aa13.08□□□□□ -0.32
TPM1-228ENST00000560975 CRYGCP07315 174 aa13.08□□□□□ -0.32
TPM1-228ENST00000560975 LINC00574Q9H8X3 128 aa13.08□□□□□ -0.32
TPM1-228ENST00000560975 IGKV2D-26A0A0A0MRZ7 120 aa13.08□□□□□ -0.32
TPM1-228ENST00000560975 RBP4P02753 201 aa13.08□□□□□ -0.32
TPM1-228ENST00000560975 VMA21Q3ZAQ7 101 aa13.08□□□□□ -0.32
TPM1-228ENST00000560975 CLUHP3Q96NS8 147 aa13.08□□□□□ -0.32
TPM1-228ENST00000560975 SIGMAR1Q99720 223 aa13.08□□□□□ -0.32
TPM1-228ENST00000560975 LINC00312Q9Y6C7 94 aa13.08□□□□□ -0.32
TPM1-228ENST00000560975 BOD1L1Q8NFC6 3051 aa13.07□□□□□ -0.32
TPM1-228ENST00000560975 M0R3E3 92 aa13.07□□□□□ -0.32
TPM1-228ENST00000560975 IGHV1-46P01743 117 aa13.07□□□□□ -0.32
TPM1-228ENST00000560975 ORMDL3Q8N138 153 aa13.07□□□□□ -0.32
TPM1-228ENST00000560975 CACNA1GO43497 2377 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms