RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 UBE2L3P68036 154 aaKnown RBP6.61□□□□□ -1.35
TRAF3-209ENST00000560463 PDE6HQ13956 83 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 OR4F17Q8NGA8 305 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 FXYD5Q96DB9 178 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 GRAMD2BQ96HH9 432 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 OR4F4Q96R69 305 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 RARRES2Q99969 163 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 SLC35B3Q9H1N7 401 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 UFC1Q9Y3C8 167 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 TSSC4Q9Y5U2 329 aaPredicted RBP6.61□□□□□ -1.35
TRAF3-209ENST00000560463 U3KQE9 123 aa6.61□□□□□ -1.35
TRAF3-209ENST00000560463 IGHV4OR15-8A0A075B7B6 117 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 A0A087WW49 117 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 TMEM218A2RU14 115 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 FAM74A7A6NL05 159 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 A8MWP6 167 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 C11orf94C9JXX5 98 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 F6UZH7 168 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 LINC01619G3V211 115 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 SRP19P09132 144 aaKnown RBP6.6□□□□□ -1.35
TRAF3-209ENST00000560463 OR10J4P0C629 311 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 NBEAP1P0C6P0 100 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 PYYP10082 97 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 BMI1P35226 326 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 MEOX2P50222 304 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 SRSF3P84103 164 aaKnown RBP6.6□□□□□ -1.35
TRAF3-209ENST00000560463 FOXL1Q12952 345 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 TCTEX1D4Q5JR98 221 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 LEMD1Q68G75 181 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 REC114Q7Z4M0 266 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 OR8I2Q8N0Y5 310 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 LYPD1Q8N2G4 141 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 KLHL30-AS1Q8NEE0 82 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 RXFP4Q8TDU9 374 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 OR5B12Q96R08 314 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 TCEAL7Q9BRU2 100 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 C20orf24Q9BUV8 137 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 ELOVL1Q9BW60 279 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 SEC11CQ9BY50 192 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 TMEM231Q9H6L2 316 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 DAZ1Q9NQZ3 744 aaKnown RBP6.6□□□□□ -1.35
TRAF3-209ENST00000560463 JMJD1CQ15652 2540 aa6.6□□□□□ -1.35
TRAF3-209ENST00000560463 IGHV7-4-1A0A0J9YVY3 117 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 ZNF320A2RRD8 509 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 MRPS12O15235 138 aaKnown RBP6.59□□□□□ -1.35
TRAF3-209ENST00000560463 ZNF253O75346 499 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 SFTA3P0C7M3 94 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 IGLC2P0DOY2 106 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 CD28P10747 220 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 HOXD3P31249 432 aaPredicted RBP6.59□□□□□ -1.35
TRAF3-209ENST00000560463 GALR1P47211 349 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 CD81P60033 236 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 UBE2G2P60604 165 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 KHDC1LQ5JSQ8 128 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 C10orf91Q5T1B1 145 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 CST9LP1Q5W188 147 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 C16orf54Q6UWD8 224 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 C1QL4Q86Z23 238 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 OR11H1Q8NG94 326 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 DPF1Q92782 380 aa6.59□□□□□ -1.35
TRAF3-209ENST00000560463 ATRQ13535 2644 aa6.58□□□□□ -1.36
TRAF3-209ENST00000560463 TRBV19A0A075B6N1 114 aa6.58□□□□□ -1.36
TRAF3-209ENST00000560463 IGHV3OR16-8A0A075B7F1 116 aa6.58□□□□□ -1.36
TRAF3-209ENST00000560463 A0A087X0K7 114 aa6.58□□□□□ -1.36
TRAF3-209ENST00000560463 F8W036 122 aa6.58□□□□□ -1.36
TRAF3-209ENST00000560463 ATF4P18848 351 aaPredicted RBP6.58□□□□□ -1.36
TRAF3-209ENST00000560463 PSG9Q00887 426 aa6.58□□□□□ -1.36
TRAF3-209ENST00000560463 KLF5Q13887 457 aaPredicted RBP6.58□□□□□ -1.36
TRAF3-209ENST00000560463 FAM74A3Q4VXF1 159 aa6.58□□□□□ -1.36
TRAF3-209ENST00000560463 SOHLH1Q5JUK2 328 aa6.58□□□□□ -1.36
TRAF3-209ENST00000560463 UNQ9165/PRO28630Q6UXU0 137 aa6.58□□□□□ -1.36
TRAF3-209ENST00000560463 SIGLEC15Q6ZMC9 328 aa6.58□□□□□ -1.36
TRAF3-209ENST00000560463 CCDC28AQ8IWP9 274 aa6.58□□□□□ -1.36
TRAF3-209ENST00000560463 OR1N2Q8NGR9 330 aa6.58□□□□□ -1.36
TRAF3-209ENST00000560463 BLNKQ8WV28 456 aa6.58□□□□□ -1.36
TRAF3-209ENST00000560463 RPUSD4Q96CM3 377 aaKnown RBP6.58□□□□□ -1.36
TRAF3-209ENST00000560463 ZNF586Q9NXT0 402 aa6.58□□□□□ -1.36
TRAF3-209ENST00000560463 PEMTQ9UBM1 199 aa6.58□□□□□ -1.36
TRAF3-209ENST00000560463 YTHDF2Q9Y5A9 579 aaKnown RBP6.58□□□□□ -1.36
TRAF3-209ENST00000560463 SORL1Q92673 2214 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 HELTA6NFD8 242 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 C9JQL5 133 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 H3BQ15 152 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 ZNF207O43670 478 aaKnown RBP6.57□□□□□ -1.36
TRAF3-209ENST00000560463 MYCNOSP40205 109 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 ATP5G3P48201 142 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 RANP62826 216 aaKnown RBP6.57□□□□□ -1.36
TRAF3-209ENST00000560463 SUMO1P63165 101 aaKnown RBP6.57□□□□□ -1.36
TRAF3-209ENST00000560463 FHL3Q13643 280 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 ARL6IP6Q8N6S5 226 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 CYB561D1Q8N8Q1 229 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 GLMPQ8WWB7 406 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 HIST1H2BAQ96A08 127 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 LINC00052Q96N35 136 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 CITED2Q99967 270 aaPredicted RBP6.57□□□□□ -1.36
TRAF3-209ENST00000560463 SLC50A1Q9BRV3 221 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 AAMDCQ9H7C9 122 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 OTORQ9NRC9 128 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 CLEC5AQ9NY25 188 aa6.57□□□□□ -1.36
TRAF3-209ENST00000560463 SMPXQ9UHP9 88 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms