RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 H3BP45 60 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 SYNGR2O43760 224 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 MED6O75586 246 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 SFT2D2O95562 160 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 HBE1P02100 147 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 HOXB5P09067 269 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 ORM2P19652 201 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 GALR1P47211 349 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 LGALS9BQ3B8N2 356 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 SPANXN5Q5MJ07 72 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 GGNBP1Q5YKI7 109 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 UBE2DNLQ8IWF7 75 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 KRTAP4-12Q9BQ66 201 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 RPRMQ9NS64 109 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 DOK5Q9P104 306 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 V9GYH0 126 aa8.25□□□□□ -1.09
USP3-214ENST00000559718 DNAH11Q96DT5 4516 aa8.24□□□□□ -1.09
USP3-214ENST00000559718 PIGBOS1A0A0B4J2F0 54 aa8.24□□□□□ -1.09
USP3-214ENST00000559718 NOL3O60936 208 aaKnown RBP8.24□□□□□ -1.09
USP3-214ENST00000559718 IFNA21P01568 189 aa8.24□□□□□ -1.09
USP3-214ENST00000559718 AP3S2P59780 193 aa8.24□□□□□ -1.09
USP3-214ENST00000559718 RRN3P1Q2M238 152 aa8.24□□□□□ -1.09
USP3-214ENST00000559718 TMEM88Q6PEY1 159 aa8.24□□□□□ -1.09
USP3-214ENST00000559718 ACOT7LQ6ZUV0 252 aa8.24□□□□□ -1.09
USP3-214ENST00000559718 RNF182Q8N6D2 247 aa8.24□□□□□ -1.09
USP3-214ENST00000559718 OR1B1Q8NGR6 318 aa8.24□□□□□ -1.09
USP3-214ENST00000559718 FAM210BQ96KR6 192 aa8.24□□□□□ -1.09
USP3-214ENST00000559718 CIB3Q96Q77 187 aaPredicted RBP8.24□□□□□ -1.09
USP3-214ENST00000559718 TMED3Q9Y3Q3 217 aa8.24□□□□□ -1.09
USP3-214ENST00000559718 NACAE9PAV3 2078 aa8.23□□□□□ -1.09
USP3-214ENST00000559718 TRAV8-2A0A0B4J237 113 aa8.23□□□□□ -1.09
USP3-214ENST00000559718 TEX48A0A1B0GUV7 120 aa8.23□□□□□ -1.09
USP3-214ENST00000559718 ZNF705GA8MUZ8 300 aaPredicted RBP8.23□□□□□ -1.09
USP3-214ENST00000559718 M0R2Z0 102 aa8.23□□□□□ -1.09
USP3-214ENST00000559718 CRXO43186 299 aaPredicted RBP8.23□□□□□ -1.09
USP3-214ENST00000559718 CFDP00746 253 aaPredicted RBP8.23□□□□□ -1.09
USP3-214ENST00000559718 PRB4P10163 310 aaPredicted RBP8.23□□□□□ -1.09
USP3-214ENST00000559718 MEOX2P50222 304 aa8.23□□□□□ -1.09
USP3-214ENST00000559718 CNN1P51911 297 aaKnown RBP8.23□□□□□ -1.09
USP3-214ENST00000559718 RPP30P78346 268 aaKnown RBP8.23□□□□□ -1.09
USP3-214ENST00000559718 AKR1C1Q04828 323 aa8.23□□□□□ -1.09
USP3-214ENST00000559718 OXA1LQ15070 435 aa8.23□□□□□ -1.09
USP3-214ENST00000559718 SPINK13Q1W4C9 94 aa8.23□□□□□ -1.09
USP3-214ENST00000559718 SAMD13Q5VXD3 122 aa8.23□□□□□ -1.09
USP3-214ENST00000559718 Q6ZR54 194 aa8.23□□□□□ -1.09
USP3-214ENST00000559718 BPIFCQ8NFQ6 507 aa8.23□□□□□ -1.09
USP3-214ENST00000559718 IGF2BP2-AS1Q96M15 143 aa8.23□□□□□ -1.09
USP3-214ENST00000559718 SLC25A21Q9BQT8 299 aaPredicted RBP8.23□□□□□ -1.09
USP3-214ENST00000559718 TMEM147Q9BVK8 224 aa8.23□□□□□ -1.09
USP3-214ENST00000559718 SLC45A2Q9UMX9 530 aa8.23□□□□□ -1.09
USP3-214ENST00000559718 ADAP1O75689 374 aa8.22□□□□□ -1.09
USP3-214ENST00000559718 DAD1P61803 113 aa8.22□□□□□ -1.09
USP3-214ENST00000559718 POLR2GP62487 172 aaKnown RBP eCLIP8.22□□□□□ -1.09
USP3-214ENST00000559718 FGL1Q08830 312 aa8.22□□□□□ -1.09
USP3-214ENST00000559718 LCE3BQ5TA77 95 aa8.22□□□□□ -1.09
USP3-214ENST00000559718 BAP18Q8IXM2 172 aa8.22□□□□□ -1.09
USP3-214ENST00000559718 OR11H7Q8NGC8 314 aa8.22□□□□□ -1.09
USP3-214ENST00000559718 OR4D5Q8NGN0 318 aa8.22□□□□□ -1.09
USP3-214ENST00000559718 TMEM208Q9BTX3 173 aa8.22□□□□□ -1.09
USP3-214ENST00000559718 STRAPQ9Y3F4 350 aaKnown RBP8.22□□□□□ -1.09
USP3-214ENST00000559718 MUC4Q99102 2169 aa8.21□□□□□ -1.09
USP3-214ENST00000559718 TRAV12-2A0A075B6T6 113 aa8.21□□□□□ -1.1
USP3-214ENST00000559718 SMCO3A2RU48 225 aa8.21□□□□□ -1.1
USP3-214ENST00000559718 A6NHS1 94 aa8.21□□□□□ -1.1
USP3-214ENST00000559718 H3BRN7 92 aa8.21□□□□□ -1.1
USP3-214ENST00000559718 CCNKO75909 580 aa8.21□□□□□ -1.1
USP3-214ENST00000559718 MED14OSP0DP75 135 aa8.21□□□□□ -1.1
USP3-214ENST00000559718 ID3Q02535 119 aa8.21□□□□□ -1.1
USP3-214ENST00000559718 CYP2G1PQ6ZSU1 146 aa8.21□□□□□ -1.1
USP3-214ENST00000559718 TMEM144Q7Z5S9 345 aa8.21□□□□□ -1.1
USP3-214ENST00000559718 UHRF2Q96PU4 802 aa8.21□□□□□ -1.1
USP3-214ENST00000559718 SLC25A39Q9BZJ4 359 aaPredicted RBP8.21□□□□□ -1.1
USP3-214ENST00000559718 PKD1P98161 4303 aa8.2□□□□□ -1.1
USP3-214ENST00000559718 PLAC8L1A1L4L8 177 aa8.2□□□□□ -1.1
USP3-214ENST00000559718 C9orf170A2RU37 121 aa8.2□□□□□ -1.1
USP3-214ENST00000559718 PMS2P5A8MQ11 134 aa8.2□□□□□ -1.1
USP3-214ENST00000559718 DUSP14O95147 198 aaKnown RBP8.2□□□□□ -1.1
USP3-214ENST00000559718 INSP01308 110 aa8.2□□□□□ -1.1
USP3-214ENST00000559718 IL5P05113 134 aa8.2□□□□□ -1.1
USP3-214ENST00000559718 AZU1P20160 251 aa8.2□□□□□ -1.1
USP3-214ENST00000559718 FCN2Q15485 313 aa8.2□□□□□ -1.1
USP3-214ENST00000559718 RNF212Q495C1 297 aa8.2□□□□□ -1.1
USP3-214ENST00000559718 CCDC190Q86UF4 302 aa8.2□□□□□ -1.1
USP3-214ENST00000559718 ZNF738Q8NE65 137 aa8.2□□□□□ -1.1
USP3-214ENST00000559718 GPR82Q96P67 336 aa8.2□□□□□ -1.1
USP3-214ENST00000559718 SHANK2-AS3Q9BTD1 123 aa8.2□□□□□ -1.1
USP3-214ENST00000559718 PSENENQ9NZ42 101 aa8.2□□□□□ -1.1
USP3-214ENST00000559718 FLVCR2Q9UPI3 526 aa8.2□□□□□ -1.1
USP3-214ENST00000559718 SSSCA1O60232 199 aa8.19□□□□□ -1.1
USP3-214ENST00000559718 OR5G3P0C626 314 aa8.19□□□□□ -1.1
USP3-214ENST00000559718 LINC00869P0C866 280 aa8.19□□□□□ -1.1
USP3-214ENST00000559718 DEFB130BP0DP73 79 aa8.19□□□□□ -1.1
USP3-214ENST00000559718 DEFB130AP0DP74 79 aa8.19□□□□□ -1.1
USP3-214ENST00000559718 S100A5P33763 92 aa8.19□□□□□ -1.1
USP3-214ENST00000559718 RRAS2P62070 204 aaPredicted RBP8.19□□□□□ -1.1
USP3-214ENST00000559718 ZNF575Q86XF7 245 aa8.19□□□□□ -1.1
USP3-214ENST00000559718 SRRQ9GZT4 340 aa8.19□□□□□ -1.1
USP3-214ENST00000559718 HIGD1AQ9Y241 93 aa8.19□□□□□ -1.1
USP3-214ENST00000559718 CCDC160A6NGH7 325 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms