RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 TPPP2P59282 170 aa11.07□□□□□ -0.64
RABGGTA-209ENST00000559551 Q56UQ5 140 aa11.07□□□□□ -0.64
RABGGTA-209ENST00000559551 FAM90A2PQ658T7 463 aa11.07□□□□□ -0.64
RABGGTA-209ENST00000559551 TMEM183AQ8IXX5 376 aa11.07□□□□□ -0.64
RABGGTA-209ENST00000559551 UHRF2Q96PU4 802 aa11.07□□□□□ -0.64
RABGGTA-209ENST00000559551 TRBV12-3P01733 135 aa11.06□□□□□ -0.64
RABGGTA-209ENST00000559551 BCL2P10415 239 aa11.06□□□□□ -0.64
RABGGTA-209ENST00000559551 PF4V1P10720 104 aa11.06□□□□□ -0.64
RABGGTA-209ENST00000559551 GPR183P32249 361 aa11.06□□□□□ -0.64
RABGGTA-209ENST00000559551 PLP1P60201 277 aa11.06□□□□□ -0.64
RABGGTA-209ENST00000559551 JOSD1Q15040 202 aaPredicted RBP11.06□□□□□ -0.64
RABGGTA-209ENST00000559551 ZNF124Q15973 351 aa11.06□□□□□ -0.64
RABGGTA-209ENST00000559551 ZNF503Q96F45 646 aa11.06□□□□□ -0.64
RABGGTA-209ENST00000559551 TRAV5A0A0B4J249 113 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 FAM223BA6NKX1 122 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 PHOX2AO14813 284 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 TOMM40O96008 361 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 CLEC3BP05452 202 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 STAG3L2P0CL84 134 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 STAG3L3P0CL85 134 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 RAB9AP51151 201 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 HILS1P60008 231 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 ATP5G2Q06055 141 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 FAM78BQ5VT40 261 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 CLEC19AQ6UXS0 136 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 FAM223AQ8IWN6 122 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 ZNF491Q8N8L2 437 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 GATAD1Q8WUU5 269 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 TXN2Q99757 166 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 PRO1933Q9H354 126 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 GNG13Q9P2W3 67 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 IFNA1P01562 189 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 RNASE1P07998 156 aaKnown RBP11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 YPEL3P61236 119 aaPredicted RBP11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 FAM167A-AS1Q96KT0 104 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 DNAJC4Q9NNZ3 241 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 FUT9Q9Y231 359 aa11.05□□□□□ -0.64
RABGGTA-209ENST00000559551 IGHV3-35A0A0C4DH35 117 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 WI2-2373I1.2A0A1W2PRP0 233 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 PPP5D1E7EU14 171 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 IGHV3-11P01762 117 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 ORM2P19652 201 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 RHOBP62745 196 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 EEF1AKMT3Q96AZ1 226 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 SRD5A3Q9H8P0 318 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 SDF2L1Q9HCN8 221 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 C2CD3Q4AC94 2353 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 TRAV30A0A087WSZ9 112 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 A0A1W2PPV4 95 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 ARL14EPLP0DKL9 152 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 USF2Q15853 346 aaPredicted RBP11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 OR51G1Q8NGK1 321 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 OR1B1Q8NGR6 318 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 NDUFAF3Q9BU61 184 aa11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 MRPL27Q9P0M9 148 aaKnown RBP11.04□□□□□ -0.64
RABGGTA-209ENST00000559551 TRBV7-1A0A0A6YYK4 115 aa11.03□□□□□ -0.64
RABGGTA-209ENST00000559551 COX7A2P2O60397 106 aa11.03□□□□□ -0.64
RABGGTA-209ENST00000559551 RPLP1P05386 114 aaKnown RBP11.03□□□□□ -0.64
RABGGTA-209ENST00000559551 LYZP61626 148 aa11.03□□□□□ -0.64
RABGGTA-209ENST00000559551 SRSF2Q01130 221 aaKnown RBP11.03□□□□□ -0.64
RABGGTA-209ENST00000559551 COA6Q5JTJ3 125 aaKnown RBP11.03□□□□□ -0.64
RABGGTA-209ENST00000559551 MYOZ3Q8TDC0 251 aa11.03□□□□□ -0.64
RABGGTA-209ENST00000559551 SLC25A2Q9BXI2 301 aa11.03□□□□□ -0.64
RABGGTA-209ENST00000559551 VAX2Q9UIW0 290 aa11.03□□□□□ -0.64
RABGGTA-209ENST00000559551 NIPBLQ6KC79 2804 aaeCLIP11.03□□□□□ -0.64
RABGGTA-209ENST00000559551 A8MWP6 167 aa11.02□□□□□ -0.64
RABGGTA-209ENST00000559551 GCGP01275 180 aa11.02□□□□□ -0.64
RABGGTA-209ENST00000559551 PMS2P11Q13670 270 aa11.02□□□□□ -0.64
RABGGTA-209ENST00000559551 C10orf113Q5VZT2 155 aa11.02□□□□□ -0.64
RABGGTA-209ENST00000559551 HIST2H2BDQ6DRA6 164 aa11.02□□□□□ -0.64
RABGGTA-209ENST00000559551 ZNF418Q8TF45 676 aaPredicted RBP11.02□□□□□ -0.64
RABGGTA-209ENST00000559551 WIPF2Q8TF74 440 aaPredicted RBP11.02□□□□□ -0.64
RABGGTA-209ENST00000559551 ZFAND3Q9H8U3 227 aa11.02□□□□□ -0.64
RABGGTA-209ENST00000559551 IGHV3OR16-8A0A075B7F1 116 aa11.02□□□□□ -0.65
RABGGTA-209ENST00000559551 IL4P05112 153 aa11.02□□□□□ -0.65
RABGGTA-209ENST00000559551 SCGB2A2Q13296 93 aa11.02□□□□□ -0.65
RABGGTA-209ENST00000559551 TCTEX1D4Q5JR98 221 aa11.02□□□□□ -0.65
RABGGTA-209ENST00000559551 LINC00305Q7Z4B0 112 aa11.02□□□□□ -0.65
RABGGTA-209ENST00000559551 RNF125Q96EQ8 232 aa11.02□□□□□ -0.65
RABGGTA-209ENST00000559551 USMG5Q96IX5 58 aa11.02□□□□□ -0.65
RABGGTA-209ENST00000559551 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.01□□□□□ -0.65
RABGGTA-209ENST00000559551 TMEM89A2RUT3 159 aa11.01□□□□□ -0.65
RABGGTA-209ENST00000559551 HYPMO75409 117 aa11.01□□□□□ -0.65
RABGGTA-209ENST00000559551 AMBPP02760 352 aa11.01□□□□□ -0.65
RABGGTA-209ENST00000559551 GZMBP10144 247 aa11.01□□□□□ -0.65
RABGGTA-209ENST00000559551 LEMD1Q68G75 181 aa11.01□□□□□ -0.65
RABGGTA-209ENST00000559551 RNF152Q8N8N0 203 aa11.01□□□□□ -0.65
RABGGTA-209ENST00000559551 OR1L4Q8NGR5 311 aa11.01□□□□□ -0.65
RABGGTA-209ENST00000559551 PYGO2Q9BRQ0 406 aa11.01□□□□□ -0.65
RABGGTA-209ENST00000559551 C19orf24Q9BVV8 132 aa11.01□□□□□ -0.65
RABGGTA-209ENST00000559551 GNB4Q9HAV0 340 aa11.01□□□□□ -0.65
RABGGTA-209ENST00000559551 NAT8Q9UHE5 227 aa11.01□□□□□ -0.65
RABGGTA-209ENST00000559551 CRLF1O75462 422 aa11□□□□□ -0.65
RABGGTA-209ENST00000559551 GCHFRP30047 84 aa11□□□□□ -0.65
RABGGTA-209ENST00000559551 TOMM20LQ6UXN7 152 aa11□□□□□ -0.65
RABGGTA-209ENST00000559551 MRPL32Q9BYC8 188 aaKnown RBP11□□□□□ -0.65
RABGGTA-209ENST00000559551 CLPSL1A2RUU4 121 aa11□□□□□ -0.65
RABGGTA-209ENST00000559551 C8orf88P0DMB2 117 aa11□□□□□ -0.65
RABGGTA-209ENST00000559551 FOXE3Q13461 319 aa11□□□□□ -0.65
RABGGTA-209ENST00000559551 TEX38Q6PEX7 206 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms