RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 CXorf65A6NEN9 183 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 HELTA6NFD8 242 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 C9JCJ5 164 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 MT-ND4LP03901 98 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 ELANEP08246 267 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 CRYBB3P26998 211 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 RANP62826 216 aaKnown RBP10.67□□□□□ -0.7
TPM1-215ENST00000558868 RPL23P62829 140 aaKnown RBP10.67□□□□□ -0.7
TPM1-215ENST00000558868 FOXE3Q13461 319 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 TEX38Q6PEX7 206 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 TMEM88Q6PEY1 159 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 ZNF329Q86UD4 541 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 CBLN2Q8IUK8 224 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.67□□□□□ -0.7
TPM1-215ENST00000558868 METTL26Q96S19 204 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 ELOVL1Q9BW60 279 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 ZFAND3Q9H8U3 227 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 OTORQ9NRC9 128 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 TMEM242Q9NWH2 141 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 VPS13CQ709C8 3753 aa10.67□□□□□ -0.7
TPM1-215ENST00000558868 MAP1AP78559 2803 aaPredicted RBP10.66□□□□□ -0.7
TPM1-215ENST00000558868 NDUFA4O00483 81 aa10.66□□□□□ -0.7
TPM1-215ENST00000558868 S100A9P06702 114 aaKnown RBP10.66□□□□□ -0.7
TPM1-215ENST00000558868 PSMB8P28062 276 aa10.66□□□□□ -0.7
TPM1-215ENST00000558868 MYCNOSP40205 109 aa10.66□□□□□ -0.7
TPM1-215ENST00000558868 AKR1C3P42330 323 aa10.66□□□□□ -0.7
TPM1-215ENST00000558868 CNN1P51911 297 aaKnown RBP10.66□□□□□ -0.7
TPM1-215ENST00000558868 TAS2R60P59551 318 aa10.66□□□□□ -0.7
TPM1-215ENST00000558868 PDE6HQ13956 83 aa10.66□□□□□ -0.7
TPM1-215ENST00000558868 C1orf194Q5T5A4 169 aa10.66□□□□□ -0.7
TPM1-215ENST00000558868 C15orf54Q8N8G6 183 aa10.66□□□□□ -0.7
TPM1-215ENST00000558868 C5orf17Q8NAS9 161 aa10.66□□□□□ -0.7
TPM1-215ENST00000558868 OR4X2Q8NGF9 303 aa10.66□□□□□ -0.7
TPM1-215ENST00000558868 KLK15Q9H2R5 256 aa10.66□□□□□ -0.7
TPM1-215ENST00000558868 TRBV19A0A075B6N1 114 aa10.65□□□□□ -0.7
TPM1-215ENST00000558868 PGPA6NDG6 321 aa10.65□□□□□ -0.7
TPM1-215ENST00000558868 CLDN34H7C241 214 aa10.65□□□□□ -0.7
TPM1-215ENST00000558868 PEX7O00628 323 aa10.65□□□□□ -0.7
TPM1-215ENST00000558868 TSPAN4O14817 238 aa10.65□□□□□ -0.7
TPM1-215ENST00000558868 GGCTO75223 188 aaKnown RBP10.65□□□□□ -0.7
TPM1-215ENST00000558868 SLC25A5P05141 298 aaKnown RBP10.65□□□□□ -0.7
TPM1-215ENST00000558868 IGLC2P0DOY2 106 aa10.65□□□□□ -0.7
TPM1-215ENST00000558868 RPL35P42766 123 aaKnown RBP10.65□□□□□ -0.7
TPM1-215ENST00000558868 RPL15P61313 204 aaKnown RBP10.65□□□□□ -0.7
TPM1-215ENST00000558868 TMEM95Q3KNT9 176 aa10.65□□□□□ -0.7
TPM1-215ENST00000558868 OR8I2Q8N0Y5 310 aa10.65□□□□□ -0.7
TPM1-215ENST00000558868 C2CD4CQ8TF44 421 aa10.65□□□□□ -0.7
TPM1-215ENST00000558868 ANAPC16Q96DE5 110 aa10.65□□□□□ -0.7
TPM1-215ENST00000558868 Q9H3A6 140 aa10.65□□□□□ -0.7
TPM1-215ENST00000558868 ZNF586Q9NXT0 402 aa10.65□□□□□ -0.7
TPM1-215ENST00000558868 EPDR1Q9UM22 224 aa10.65□□□□□ -0.7
TPM1-215ENST00000558868 PPP5D1E7EU14 171 aa10.64□□□□□ -0.71
TPM1-215ENST00000558868 PPP1R2P9O14990 202 aa10.64□□□□□ -0.71
TPM1-215ENST00000558868 MRPS12O15235 138 aaKnown RBP10.64□□□□□ -0.71
TPM1-215ENST00000558868 CD99P14209 185 aa10.64□□□□□ -0.71
TPM1-215ENST00000558868 ATF4P18848 351 aaPredicted RBP10.64□□□□□ -0.71
TPM1-215ENST00000558868 GNG4P50150 75 aa10.64□□□□□ -0.71
TPM1-215ENST00000558868 MEOX2P50222 304 aa10.64□□□□□ -0.71
TPM1-215ENST00000558868 PSG9Q00887 426 aa10.64□□□□□ -0.71
TPM1-215ENST00000558868 LINC01551Q86U37 167 aa10.64□□□□□ -0.71
TPM1-215ENST00000558868 CMTM2Q8TAZ6 248 aa10.64□□□□□ -0.71
TPM1-215ENST00000558868 DERL1Q9BUN8 251 aa10.64□□□□□ -0.71
TPM1-215ENST00000558868 PEF1Q9UBV8 284 aaKnown RBP10.64□□□□□ -0.71
TPM1-215ENST00000558868 IGHV3-35A0A0C4DH35 117 aa10.63□□□□□ -0.71
TPM1-215ENST00000558868 DNAJC9-AS1A6NH13 148 aa10.63□□□□□ -0.71
TPM1-215ENST00000558868 ZNF253O75346 499 aa10.63□□□□□ -0.71
TPM1-215ENST00000558868 IGHV3-11P01762 117 aa10.63□□□□□ -0.71
TPM1-215ENST00000558868 GALR1P47211 349 aa10.63□□□□□ -0.71
TPM1-215ENST00000558868 ARL6IP6Q8N6S5 226 aa10.63□□□□□ -0.71
TPM1-215ENST00000558868 RNF152Q8N8N0 203 aa10.63□□□□□ -0.71
TPM1-215ENST00000558868 ZNF418Q8TF45 676 aaPredicted RBP10.63□□□□□ -0.71
TPM1-215ENST00000558868 ZNF414Q96IQ9 312 aa10.63□□□□□ -0.71
TPM1-215ENST00000558868 ATG101Q9BSB4 218 aa10.63□□□□□ -0.71
TPM1-215ENST00000558868 AAMDCQ9H7C9 122 aa10.63□□□□□ -0.71
TPM1-215ENST00000558868 CDC42EP3Q9UKI2 254 aa10.63□□□□□ -0.71
TPM1-215ENST00000558868 CCDC168Q8NDH2 2452 aa10.62□□□□□ -0.71
TPM1-215ENST00000558868 H7BYZ3 331 aa10.62□□□□□ -0.71
TPM1-215ENST00000558868 K7EQM0 130 aa10.62□□□□□ -0.71
TPM1-215ENST00000558868 BUB3O43684 328 aa10.62□□□□□ -0.71
TPM1-215ENST00000558868 CRYBA1P05813 215 aa10.62□□□□□ -0.71
TPM1-215ENST00000558868 SRD5A1P18405 259 aa10.62□□□□□ -0.71
TPM1-215ENST00000558868 UBE2G1P62253 170 aa10.62□□□□□ -0.71
TPM1-215ENST00000558868 RNF212Q495C1 297 aa10.62□□□□□ -0.71
TPM1-215ENST00000558868 FAM106AQ4KMX7 169 aa10.62□□□□□ -0.71
TPM1-215ENST00000558868 CENPWQ5EE01 88 aa10.62□□□□□ -0.71
TPM1-215ENST00000558868 ISOC2Q96AB3 205 aa10.62□□□□□ -0.71
TPM1-215ENST00000558868 GRAMD2BQ96HH9 432 aa10.62□□□□□ -0.71
TPM1-215ENST00000558868 U3KQE9 123 aa10.62□□□□□ -0.71
TPM1-215ENST00000558868 NBEAL1Q6ZS30 2694 aa10.62□□□□□ -0.71
TPM1-215ENST00000558868 FBN1P35555 2871 aaKnown RBP10.62□□□□□ -0.71
TPM1-215ENST00000558868 A0A087X0K7 114 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 SERTM2A0A1B0GWG4 89 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 A0A1W2PS18 150 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 CLPSL1A2RUU4 121 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 ZNF785A8K8V0 405 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 SNRPCP09234 159 aaKnown RBP10.61□□□□□ -0.71
TPM1-215ENST00000558868 FOSL1P15407 271 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 CSN1S1P47710 185 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 TMEM183BQ1AE95 376 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 OCC1Q8TAD7 63 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms