RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 PSMB3P49720 205 aa9.04□□□□□ -0.96
SMAD3-208ENST00000558827 S100A10P60903 97 aa9.04□□□□□ -0.96
SMAD3-208ENST00000558827 DLK1P80370 383 aa9.04□□□□□ -0.96
SMAD3-208ENST00000558827 FAM78BQ5VT40 261 aa9.04□□□□□ -0.96
SMAD3-208ENST00000558827 SLC25A39Q9BZJ4 359 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-208ENST00000558827 MFFQ9GZY8 342 aa9.04□□□□□ -0.96
SMAD3-208ENST00000558827 ARL6Q9H0F7 186 aa9.04□□□□□ -0.96
SMAD3-208ENST00000558827 SEPSECSQ9HD40 501 aaKnown RBP9.04□□□□□ -0.96
SMAD3-208ENST00000558827 MGAT4CQ9UBM8 478 aa9.04□□□□□ -0.96
SMAD3-208ENST00000558827 HIGD1AQ9Y241 93 aa9.04□□□□□ -0.96
SMAD3-208ENST00000558827 H3BRN7 92 aa9.03□□□□□ -0.96
SMAD3-208ENST00000558827 MIFP14174 115 aa9.03□□□□□ -0.96
SMAD3-208ENST00000558827 RAP2BP61225 183 aa9.03□□□□□ -0.96
SMAD3-208ENST00000558827 NUTF2P61970 127 aaKnown RBP9.03□□□□□ -0.96
SMAD3-208ENST00000558827 TMEM41BQ5BJD5 291 aa9.03□□□□□ -0.96
SMAD3-208ENST00000558827 EBLN2Q6P2I7 272 aa9.03□□□□□ -0.96
SMAD3-208ENST00000558827 PATE2Q6UY27 113 aa9.03□□□□□ -0.96
SMAD3-208ENST00000558827 FOXI2Q6ZQN5 318 aa9.03□□□□□ -0.96
SMAD3-208ENST00000558827 LINC00299Q6ZSB3 139 aa9.03□□□□□ -0.96
SMAD3-208ENST00000558827 Q6ZTC4 211 aa9.03□□□□□ -0.96
SMAD3-208ENST00000558827 RPP25LQ8N5L8 163 aaKnown RBP9.03□□□□□ -0.96
SMAD3-208ENST00000558827 CCDC32Q9BV29 185 aa9.03□□□□□ -0.96
SMAD3-208ENST00000558827 NPVFQ9HCQ7 196 aa9.03□□□□□ -0.96
SMAD3-208ENST00000558827 PLA2G2EQ9NZK7 142 aa9.03□□□□□ -0.96
SMAD3-208ENST00000558827 TRAV8-2A0A0B4J237 113 aa9.02□□□□□ -0.97
SMAD3-208ENST00000558827 H3BTX0 84 aa9.02□□□□□ -0.97
SMAD3-208ENST00000558827 ISLRO14498 428 aa9.02□□□□□ -0.97
SMAD3-208ENST00000558827 GOSR2O14653 212 aa9.02□□□□□ -0.97
SMAD3-208ENST00000558827 TSC22D2O75157 780 aa9.02□□□□□ -0.97
SMAD3-208ENST00000558827 SIX6O95475 246 aa9.02□□□□□ -0.97
SMAD3-208ENST00000558827 PRM2P04554 102 aa9.02□□□□□ -0.97
SMAD3-208ENST00000558827 CAV2P51636 162 aa9.02□□□□□ -0.97
SMAD3-208ENST00000558827 PSG9Q00887 426 aa9.02□□□□□ -0.97
SMAD3-208ENST00000558827 MZT2BQ6NZ67 158 aa9.02□□□□□ -0.97
SMAD3-208ENST00000558827 C2orf50Q96LR7 162 aa9.02□□□□□ -0.97
SMAD3-208ENST00000558827 SHANK2-AS3Q9BTD1 123 aa9.02□□□□□ -0.97
SMAD3-208ENST00000558827 C1QTNF4Q9BXJ3 329 aa9.02□□□□□ -0.97
SMAD3-208ENST00000558827 RPRMQ9NS64 109 aa9.02□□□□□ -0.97
SMAD3-208ENST00000558827 VPS13DQ5THJ4 4388 aa9.01□□□□□ -0.97
SMAD3-208ENST00000558827 A0A0J9YX75 114 aa9.01□□□□□ -0.97
SMAD3-208ENST00000558827 AGPAT2O15120 278 aa9.01□□□□□ -0.97
SMAD3-208ENST00000558827 TAS2R30P59541 319 aa9.01□□□□□ -0.97
SMAD3-208ENST00000558827 IFITM3Q01628 133 aa9.01□□□□□ -0.97
SMAD3-208ENST00000558827 C12orf74Q32Q52 190 aa9.01□□□□□ -0.97
SMAD3-208ENST00000558827 TEPPQ6URK8 271 aa9.01□□□□□ -0.97
SMAD3-208ENST00000558827 ZNF709Q8N972 641 aa9.01□□□□□ -0.97
SMAD3-208ENST00000558827 ZNF738Q8NE65 137 aa9.01□□□□□ -0.97
SMAD3-208ENST00000558827 C2CD4CQ8TF44 421 aa9.01□□□□□ -0.97
SMAD3-208ENST00000558827 S100ZQ8WXG8 99 aa9.01□□□□□ -0.97
SMAD3-208ENST00000558827 ARV1Q9H2C2 271 aa9.01□□□□□ -0.97
SMAD3-208ENST00000558827 SLC45A2Q9UMX9 530 aa9.01□□□□□ -0.97
SMAD3-208ENST00000558827 MEOX2P50222 304 aa9□□□□□ -0.97
SMAD3-208ENST00000558827 SELENOTP62341 195 aa9□□□□□ -0.97
SMAD3-208ENST00000558827 RAB32Q13637 225 aa9□□□□□ -0.97
SMAD3-208ENST00000558827 LRRC20Q8TCA0 184 aa9□□□□□ -0.97
SMAD3-208ENST00000558827 MGST2Q99735 147 aa9□□□□□ -0.97
SMAD3-208ENST00000558827 BIRC6Q9NR09 4857 aa9□□□□□ -0.97
SMAD3-208ENST00000558827 KMT2AQ03164 3969 aa9□□□□□ -0.97
SMAD3-208ENST00000558827 TRAV5A0A0B4J249 113 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 IGSF23A1L1A6 192 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 M0R2Z0 102 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 CNN1P51911 297 aaKnown RBP8.99□□□□□ -0.97
SMAD3-208ENST00000558827 PLP1P60201 277 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 PRR20EP86478 221 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 PRR20CP86479 221 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 PRR20DP86480 221 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 PRR20BP86481 221 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 PRR20AP86496 221 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 ASAH1Q13510 395 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 SPINK13Q1W4C9 94 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 MORN5Q5VZ52 161 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 MIC13Q5XKP0 118 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 C1orf158Q8N1D5 194 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 ENKURQ8TC29 256 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 C11orf1Q9H5F2 150 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 DNAH10Q8IVF4 4471 aa8.99□□□□□ -0.97
SMAD3-208ENST00000558827 TRAV12-2A0A075B6T6 113 aa8.98□□□□□ -0.97
SMAD3-208ENST00000558827 TRAV10A0A0B4J240 114 aa8.98□□□□□ -0.97
SMAD3-208ENST00000558827 ZNF705FA8MVS1 300 aaPredicted RBP8.98□□□□□ -0.97
SMAD3-208ENST00000558827 COX7A2P2O60397 106 aa8.98□□□□□ -0.97
SMAD3-208ENST00000558827 UPK1BO75841 260 aa8.98□□□□□ -0.97
SMAD3-208ENST00000558827 RPL7P18124 248 aaKnown RBP8.98□□□□□ -0.97
SMAD3-208ENST00000558827 RHOBP62745 196 aa8.98□□□□□ -0.97
SMAD3-208ENST00000558827 HIST1H1AQ02539 215 aaPredicted RBP8.98□□□□□ -0.97
SMAD3-208ENST00000558827 ZNF705AQ6ZN79 300 aaPredicted RBP8.98□□□□□ -0.97
SMAD3-208ENST00000558827 LINC00305Q7Z4B0 112 aa8.98□□□□□ -0.97
SMAD3-208ENST00000558827 NRARPQ7Z6K4 114 aa8.98□□□□□ -0.97
SMAD3-208ENST00000558827 TMEM37Q8WXS4 190 aa8.98□□□□□ -0.97
SMAD3-208ENST00000558827 GPR82Q96P67 336 aa8.98□□□□□ -0.97
SMAD3-208ENST00000558827 TMEM208Q9BTX3 173 aa8.98□□□□□ -0.97
SMAD3-208ENST00000558827 APLNQ9ULZ1 77 aa8.98□□□□□ -0.97
SMAD3-208ENST00000558827 GOLT1BQ9Y3E0 138 aa8.98□□□□□ -0.97
SMAD3-208ENST00000558827 DEFB131BA0A096LNP1 70 aa8.97□□□□□ -0.97
SMAD3-208ENST00000558827 UBE2L5PA0A1B0GUS4 154 aa8.97□□□□□ -0.97
SMAD3-208ENST00000558827 ZNF705GA8MUZ8 300 aaPredicted RBP8.97□□□□□ -0.97
SMAD3-208ENST00000558827 FNDC10F2Z333 226 aa8.97□□□□□ -0.97
SMAD3-208ENST00000558827 HTN3P15516 51 aa8.97□□□□□ -0.97
SMAD3-208ENST00000558827 PVALBP20472 110 aaPredicted RBP8.97□□□□□ -0.97
SMAD3-208ENST00000558827 S100A7P31151 101 aa8.97□□□□□ -0.97
SMAD3-208ENST00000558827 CAMLGP49069 296 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms