RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 THAP8Q8NA92 274 aa8.53□□□□□ -1.04
SNX6-209ENST00000557265 OR4D5Q8NGN0 318 aa8.53□□□□□ -1.04
SNX6-209ENST00000557265 OR1B1Q8NGR6 318 aa8.53□□□□□ -1.04
SNX6-209ENST00000557265 C15orf40Q8WUR7 153 aa8.53□□□□□ -1.04
SNX6-209ENST00000557265 AP3S1Q92572 193 aa8.53□□□□□ -1.04
SNX6-209ENST00000557265 GNPNAT1Q96EK6 184 aaPredicted RBP8.53□□□□□ -1.04
SNX6-209ENST00000557265 NOP10Q9NPE3 64 aaKnown RBP8.53□□□□□ -1.04
SNX6-209ENST00000557265 KCNIP3Q9Y2W7 256 aa8.53□□□□□ -1.04
SNX6-209ENST00000557265 TIMM8BQ9Y5J9 83 aaPredicted RBP8.53□□□□□ -1.04
SNX6-209ENST00000557265 TRAV26-1A0A087WT03 109 aa8.52□□□□□ -1.05
SNX6-209ENST00000557265 A0A0B4J2A0 478 aa8.52□□□□□ -1.05
SNX6-209ENST00000557265 BOLA2-SMG1P6H3BVE0 249 aa8.52□□□□□ -1.05
SNX6-209ENST00000557265 CFDP00746 253 aaPredicted RBP8.52□□□□□ -1.05
SNX6-209ENST00000557265 ZNF182P17025 639 aaPredicted RBP8.52□□□□□ -1.05
SNX6-209ENST00000557265 ORM2P19652 201 aa8.52□□□□□ -1.05
SNX6-209ENST00000557265 RHOBP62745 196 aa8.52□□□□□ -1.05
SNX6-209ENST00000557265 FGL1Q08830 312 aa8.52□□□□□ -1.05
SNX6-209ENST00000557265 TMEM144Q7Z5S9 345 aa8.52□□□□□ -1.05
SNX6-209ENST00000557265 TMEM256Q8N2U0 113 aa8.52□□□□□ -1.05
SNX6-209ENST00000557265 ZNF738Q8NE65 137 aa8.52□□□□□ -1.05
SNX6-209ENST00000557265 OR1S1Q8NH92 325 aa8.52□□□□□ -1.05
SNX6-209ENST00000557265 C16orf74Q96GX8 76 aa8.52□□□□□ -1.05
SNX6-209ENST00000557265 SHPKQ9UHJ6 478 aa8.52□□□□□ -1.05
SNX6-209ENST00000557265 PAIP2BQ9ULR5 123 aaKnown RBP8.52□□□□□ -1.05
SNX6-209ENST00000557265 SLC45A2Q9UMX9 530 aa8.52□□□□□ -1.05
SNX6-209ENST00000557265 FAT1Q14517 4588 aa8.51□□□□□ -1.05
SNX6-209ENST00000557265 A0A0J9YY99 117 aa8.51□□□□□ -1.05
SNX6-209ENST00000557265 A0A1W2PPQ1 181 aa8.51□□□□□ -1.05
SNX6-209ENST00000557265 IAPPP10997 89 aa8.51□□□□□ -1.05
SNX6-209ENST00000557265 M6PRP20645 277 aa8.51□□□□□ -1.05
SNX6-209ENST00000557265 GATA2P23769 480 aaPredicted RBP8.51□□□□□ -1.05
SNX6-209ENST00000557265 RAB11AP62491 216 aa8.51□□□□□ -1.05
SNX6-209ENST00000557265 SSBP1Q04837 148 aaKnown RBP8.51□□□□□ -1.05
SNX6-209ENST00000557265 ESRGQ1W209 222 aa8.51□□□□□ -1.05
SNX6-209ENST00000557265 TMEM182Q6ZP80 229 aaPredicted RBP8.51□□□□□ -1.05
SNX6-209ENST00000557265 RXFP4Q8TDU9 374 aa8.51□□□□□ -1.05
SNX6-209ENST00000557265 GPR82Q96P67 336 aa8.51□□□□□ -1.05
SNX6-209ENST00000557265 UPK3BQ9BT76 320 aa8.51□□□□□ -1.05
SNX6-209ENST00000557265 TMEM147Q9BVK8 224 aa8.51□□□□□ -1.05
SNX6-209ENST00000557265 PPP1R14DQ9NXH3 145 aa8.51□□□□□ -1.05
SNX6-209ENST00000557265 AKAIN1P0CW23 69 aa8.5□□□□□ -1.05
SNX6-209ENST00000557265 AKR1C4P17516 323 aa8.5□□□□□ -1.05
SNX6-209ENST00000557265 HIST1H1AQ02539 215 aaPredicted RBP8.5□□□□□ -1.05
SNX6-209ENST00000557265 ZNF493Q6ZR52 646 aa8.5□□□□□ -1.05
SNX6-209ENST00000557265 BPIFCQ8NFQ6 507 aa8.5□□□□□ -1.05
SNX6-209ENST00000557265 OR51S1Q8NGJ8 323 aa8.5□□□□□ -1.05
SNX6-209ENST00000557265 OR10J6PQ8NGY7 276 aa8.5□□□□□ -1.05
SNX6-209ENST00000557265 ZNF503Q96F45 646 aa8.5□□□□□ -1.05
SNX6-209ENST00000557265 PRRT1Q99946 306 aa8.5□□□□□ -1.05
SNX6-209ENST00000557265 ZNF586Q9NXT0 402 aa8.5□□□□□ -1.05
SNX6-209ENST00000557265 ZNF701M0R085 212 aaPredicted RBP8.49□□□□□ -1.05
SNX6-209ENST00000557265 PRB4P10163 310 aaPredicted RBP8.49□□□□□ -1.05
SNX6-209ENST00000557265 HOXA5P20719 270 aa8.49□□□□□ -1.05
SNX6-209ENST00000557265 FUSP35637 526 aaKnown RBP eCLIP8.49□□□□□ -1.05
SNX6-209ENST00000557265 MRPS10P82664 201 aaKnown RBP8.49□□□□□ -1.05
SNX6-209ENST00000557265 CLVS1Q8IUQ0 354 aaPredicted RBP8.49□□□□□ -1.05
SNX6-209ENST00000557265 LYPD1Q8N2G4 141 aa8.49□□□□□ -1.05
SNX6-209ENST00000557265 OR8A1Q8NGG7 326 aa8.49□□□□□ -1.05
SNX6-209ENST00000557265 RNASE8Q8TDE3 154 aaKnown RBP8.49□□□□□ -1.05
SNX6-209ENST00000557265 TMEM263Q8WUH6 116 aaKnown RBP8.49□□□□□ -1.05
SNX6-209ENST00000557265 MIXL1Q9H2W2 232 aa8.49□□□□□ -1.05
SNX6-209ENST00000557265 PGPEP1Q9NXJ5 209 aa8.49□□□□□ -1.05
SNX6-209ENST00000557265 MRPS16Q9Y3D3 137 aaKnown RBP8.49□□□□□ -1.05
SNX6-209ENST00000557265 BOLA1Q9Y3E2 137 aa8.49□□□□□ -1.05
SNX6-209ENST00000557265 PITX3O75364 302 aa8.48□□□□□ -1.05
SNX6-209ENST00000557265 S100A7P31151 101 aa8.48□□□□□ -1.05
SNX6-209ENST00000557265 XGP55808 180 aa8.48□□□□□ -1.05
SNX6-209ENST00000557265 LINC00315P59091 139 aa8.48□□□□□ -1.05
SNX6-209ENST00000557265 SMIM4Q8WVI0 70 aa8.48□□□□□ -1.05
SNX6-209ENST00000557265 GAGE12BA1L429 117 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 PRSS46E5RG02 174 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 H7BYZ3 331 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 RGS5O15539 181 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 ADAP1O75689 374 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 GAGE7O76087 117 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 GAGE12FP0CL80 117 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 GAGE12GP0CL81 117 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 GAGE12IP0CL82 117 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 ANXA3P12429 323 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 CXCL3P19876 107 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 CDKN1BP46527 198 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 SRPXP78539 464 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 PSG3Q16557 428 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 Q5VSD8 79 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 LINC00612Q8N6U2 182 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 LRRC20Q8TCA0 184 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 SCGB3A2Q96PL1 93 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 SHANK2-AS3Q9BTD1 123 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 NAA50Q9GZZ1 169 aaKnown RBP8.47□□□□□ -1.05
SNX6-209ENST00000557265 PTTG2Q9NZH5 202 aa8.47□□□□□ -1.05
SNX6-209ENST00000557265 H3BNG1 76 aa8.46□□□□□ -1.06
SNX6-209ENST00000557265 H3BRN7 92 aa8.46□□□□□ -1.06
SNX6-209ENST00000557265 RLN2P04090 185 aa8.46□□□□□ -1.06
SNX6-209ENST00000557265 RPL7P18124 248 aaKnown RBP8.46□□□□□ -1.06
SNX6-209ENST00000557265 RPP30P78346 268 aaKnown RBP8.46□□□□□ -1.06
SNX6-209ENST00000557265 AKR1C1Q04828 323 aa8.46□□□□□ -1.06
SNX6-209ENST00000557265 KIR3DS1Q14943 382 aa8.46□□□□□ -1.06
SNX6-209ENST00000557265 CTF1Q16619 201 aa8.46□□□□□ -1.06
SNX6-209ENST00000557265 Q6ZRN7 208 aaPredicted RBP8.46□□□□□ -1.06
SNX6-209ENST00000557265 RPUSD4Q96CM3 377 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms