RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.34□□□□□ -0.113e-22■□□□□ 9.6
SDR39U1-220ENST00000556548 IGHV3-35A0A0C4DH35 117 aa14.33□□□□□ -0.11
SDR39U1-220ENST00000556548 K7EN84 100 aa14.33□□□□□ -0.11
SDR39U1-220ENST00000556548 TGFAP01135 160 aa14.33□□□□□ -0.11
SDR39U1-220ENST00000556548 ZNF491Q8N8L2 437 aa14.33□□□□□ -0.11
SDR39U1-220ENST00000556548 TOMM40O96008 361 aa14.33□□□□□ -0.12
SDR39U1-220ENST00000556548 NBEAP1P0C6P0 100 aa14.33□□□□□ -0.12
SDR39U1-220ENST00000556548 GP9P14770 177 aa14.33□□□□□ -0.12
SDR39U1-220ENST00000556548 GNG5P63218 68 aa14.33□□□□□ -0.12
SDR39U1-220ENST00000556548 CENPWQ5EE01 88 aa14.33□□□□□ -0.12
SDR39U1-220ENST00000556548 ZNF329Q86UD4 541 aa14.33□□□□□ -0.12
SDR39U1-220ENST00000556548 FAM110DQ8TAY7 271 aaPredicted RBP14.33□□□□□ -0.12
SDR39U1-220ENST00000556548 MRPL27Q9P0M9 148 aaKnown RBP14.33□□□□□ -0.12
SDR39U1-220ENST00000556548 M0QZK8 103 aa14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 GGCTO75223 188 aaKnown RBP14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 AMBPP02760 352 aa14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 OR5I1Q13606 314 aa14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 C15orf32Q32M92 178 aa14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 RNF125Q96EQ8 232 aa14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 RPH3ALQ9UNE2 315 aa14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 KMT2BQ9UMN6 2715 aaPredicted RBP14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 IGHV3OR16-8A0A075B7F1 116 aa14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 GNG4P50150 75 aa14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 RHOGP84095 191 aa14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 STXBP6Q8NFX7 210 aa14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 ANAPC16Q96DE5 110 aa14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 SFRP2Q96HF1 295 aa14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 OR5B12Q96R08 314 aa14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 CSPG4Q6UVK1 2322 aa14.32□□□□□ -0.12
SDR39U1-220ENST00000556548 TRAV34A0A0B4J273 112 aa14.31□□□□□ -0.12
SDR39U1-220ENST00000556548 FCGR2BP31994 310 aaPredicted RBP14.31□□□□□ -0.12
SDR39U1-220ENST00000556548 ERVFC1-1P60608 527 aa14.31□□□□□ -0.12
SDR39U1-220ENST00000556548 DEFB113Q30KQ7 82 aa14.31□□□□□ -0.12
SDR39U1-220ENST00000556548 SAPCD1Q5SSQ6 148 aa14.31□□□□□ -0.12
SDR39U1-220ENST00000556548 CHRDL1Q9BU40 450 aa14.31□□□□□ -0.12
SDR39U1-220ENST00000556548 PGPA6NDG6 321 aa14.31□□□□□ -0.12
SDR39U1-220ENST00000556548 RPLP1P05386 114 aaKnown RBP14.31□□□□□ -0.12
SDR39U1-220ENST00000556548 PFN1P07737 140 aaKnown RBP14.31□□□□□ -0.12
SDR39U1-220ENST00000556548 NHLRC2Q8NBF2 726 aa14.31□□□□□ -0.12
SDR39U1-220ENST00000556548 SGK494Q96LW2 274 aa14.31□□□□□ -0.12
SDR39U1-220ENST00000556548 TRAV30A0A087WSZ9 112 aa14.3□□□□□ -0.12
SDR39U1-220ENST00000556548 PRB4P10163 310 aaPredicted RBP14.3□□□□□ -0.12
SDR39U1-220ENST00000556548 FAM3BP58499 235 aaPredicted RBP14.3□□□□□ -0.12
SDR39U1-220ENST00000556548 Q5PR19 223 aa14.3□□□□□ -0.12
SDR39U1-220ENST00000556548 A0A1W2PPQ1 181 aa14.3□□□□□ -0.12
SDR39U1-220ENST00000556548 GPR183P32249 361 aa14.3□□□□□ -0.12
SDR39U1-220ENST00000556548 DOPEY2Q9Y3R5 2298 aa14.29□□□□□ -0.12
SDR39U1-220ENST00000556548 SLC25A5P05141 298 aaKnown RBP14.29□□□□□ -0.12
SDR39U1-220ENST00000556548 CTSGP08311 255 aa14.29□□□□□ -0.12
SDR39U1-220ENST00000556548 YPEL3P61236 119 aaPredicted RBP14.29□□□□□ -0.12
SDR39U1-220ENST00000556548 ZNF469Q96JG9 3925 aaPredicted RBP14.29□□□□□ -0.12
SDR39U1-220ENST00000556548 WI2-2373I1.2A0A1W2PRP0 233 aa14.29□□□□□ -0.12
SDR39U1-220ENST00000556548 C9JCJ5 164 aa14.29□□□□□ -0.12
SDR39U1-220ENST00000556548 GATA3P23771 443 aa14.29□□□□□ -0.12
SDR39U1-220ENST00000556548 TEX38Q6PEX7 206 aa14.29□□□□□ -0.12
SDR39U1-220ENST00000556548 C17orf77Q96MU5 243 aa14.29□□□□□ -0.12
SDR39U1-220ENST00000556548 SHANK2-AS3Q9BTD1 123 aa14.29□□□□□ -0.12
SDR39U1-220ENST00000556548 ZNF586Q9NXT0 402 aa14.29□□□□□ -0.12
SDR39U1-220ENST00000556548 SLC17A3O00476 420 aa14.28□□□□□ -0.12
SDR39U1-220ENST00000556548 PEX7O00628 323 aa14.28□□□□□ -0.12
SDR39U1-220ENST00000556548 ADMP35318 185 aa14.28□□□□□ -0.12
SDR39U1-220ENST00000556548 BLCAPP62952 87 aa14.28□□□□□ -0.12
SDR39U1-220ENST00000556548 MRPL52Q86TS9 123 aaKnown RBP14.28□□□□□ -0.12
SDR39U1-220ENST00000556548 TRAV41A0A0B4J266 112 aa14.27□□□□□ -0.12
SDR39U1-220ENST00000556548 A6NDX4 124 aa14.27□□□□□ -0.12
SDR39U1-220ENST00000556548 H3BRN7 92 aa14.27□□□□□ -0.12
SDR39U1-220ENST00000556548 CLEC3BP05452 202 aa14.27□□□□□ -0.12
SDR39U1-220ENST00000556548 MGST1P10620 155 aaKnown RBP14.27□□□□□ -0.12
SDR39U1-220ENST00000556548 Q6ZS46 218 aa14.27□□□□□ -0.12
SDR39U1-220ENST00000556548 ZNF48Q96MX3 618 aaPredicted RBP14.27□□□□□ -0.12
SDR39U1-220ENST00000556548 Q9H3A6 140 aa14.27□□□□□ -0.12
SDR39U1-220ENST00000556548 GNB4Q9HAV0 340 aa14.27□□□□□ -0.12
SDR39U1-220ENST00000556548 PLA2G2AP14555 144 aa14.27□□□□□ -0.13
SDR39U1-220ENST00000556548 MYCNOSP40205 109 aa14.27□□□□□ -0.13
SDR39U1-220ENST00000556548 EXOC3-AS1Q8N2X6 119 aa14.27□□□□□ -0.13
SDR39U1-220ENST00000556548 OR10G8Q8NGN5 311 aa14.27□□□□□ -0.13
SDR39U1-220ENST00000556548 Q96MF0 132 aa14.27□□□□□ -0.13
SDR39U1-220ENST00000556548 TRBV24-1A0A075B6N3 115 aa14.26□□□□□ -0.13
SDR39U1-220ENST00000556548 IQCJQ1A5X6 159 aa14.26□□□□□ -0.13
SDR39U1-220ENST00000556548 DMRTA1Q5VZB9 504 aa14.26□□□□□ -0.13
SDR39U1-220ENST00000556548 CLEC19AQ6UXS0 136 aa14.26□□□□□ -0.13
SDR39U1-220ENST00000556548 ZNF502Q8TBZ5 544 aa14.26□□□□□ -0.13
SDR39U1-220ENST00000556548 IGF2BP2-AS1Q96M15 143 aa14.26□□□□□ -0.13
SDR39U1-220ENST00000556548 RNASE7Q9H1E1 156 aaKnown RBP14.26□□□□□ -0.13
SDR39U1-220ENST00000556548 BEX4Q9NWD9 120 aaPredicted RBP14.26□□□□□ -0.13
SDR39U1-220ENST00000556548 EPDR1Q9UM22 224 aa14.26□□□□□ -0.13
SDR39U1-220ENST00000556548 TRBV9A0A0B4J1U6 114 aa14.26□□□□□ -0.13
SDR39U1-220ENST00000556548 ISLRO14498 428 aa14.26□□□□□ -0.13
SDR39U1-220ENST00000556548 CNN1P51911 297 aaKnown RBP14.26□□□□□ -0.13
SDR39U1-220ENST00000556548 LOXL1Q08397 574 aaPredicted RBP14.26□□□□□ -0.13
SDR39U1-220ENST00000556548 DEFB112Q30KQ8 113 aa14.26□□□□□ -0.13
SDR39U1-220ENST00000556548 VN1R17PQ8TDU5 208 aa14.26□□□□□ -0.13
SDR39U1-220ENST00000556548 IGHV4-31P0DP07 118 aa14.25□□□□□ -0.13
SDR39U1-220ENST00000556548 CD99P14209 185 aa14.25□□□□□ -0.13
SDR39U1-220ENST00000556548 COA6Q5JTJ3 125 aaKnown RBP14.25□□□□□ -0.13
SDR39U1-220ENST00000556548 BPIFA4PQ86YQ2 179 aa14.25□□□□□ -0.13
SDR39U1-220ENST00000556548 IGLV2-8P01709 118 aa14.25□□□□□ -0.13
SDR39U1-220ENST00000556548 HIST1H1EP10412 219 aaKnown RBP14.25□□□□□ -0.13
SDR39U1-220ENST00000556548 TMEM14CQ9P0S9 112 aa14.25□□□□□ -0.13
SDR39U1-220ENST00000556548 TEX15Q9BXT5 2789 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms