RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 TRAV30A0A087WSZ9 112 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 A0A087WW49 117 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 IGHV3-35A0A0C4DH35 117 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 ZFP92A6NM28 416 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 TAAR5O14804 337 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 NUPL2O15504 423 aaKnown RBP4.79□□□□□ -1.64
SCFD1-212ENST00000554486 TGOLN2O43493 480 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 HSPB1P04792 205 aaKnown RBP4.79□□□□□ -1.64
SCFD1-212ENST00000554486 FGF7P21781 194 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 ARL3P36405 182 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 RIPPLY3P57055 190 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 ZNF90Q03938 601 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 OPCMLQ14982 345 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 NSUN5P1Q3KNT7 163 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 SPSB3Q6PJ21 355 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 BTNL8Q6UX41 500 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 TMEM182Q6ZP80 229 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-212ENST00000554486 CYP2G1PQ6ZSU1 146 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 NDUFA11Q86Y39 141 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 PPP1R14BQ96C90 147 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 DUX3Q96PT4 197 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 RSG1Q9BU20 258 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 GGTLC1Q9BX51 225 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 ARV1Q9H2C2 271 aa4.79□□□□□ -1.64
SCFD1-212ENST00000554486 IGLV5-52A0A0A0MRZ9 124 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 BORCS7-ASMTA0A0B4J1R7 106 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 KANTRA0A1W2PQU2 76 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 CCL24O00175 119 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 AGPAT2O15120 278 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 GGCTO75223 188 aaKnown RBP4.78□□□□□ -1.64
SCFD1-212ENST00000554486 MPDU1O75352 247 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 OR2C1O95371 312 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 SCGB1D1O95968 90 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 IFNA5P01569 189 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 LINC00869P0C866 280 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 GATA2P23769 480 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-212ENST00000554486 CAMLGP49069 296 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 YPEL3P61236 119 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-212ENST00000554486 ZNF616Q08AN1 781 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 ZNF266Q14584 549 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 MIC13Q5XKP0 118 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 TOMM20LQ6UXN7 152 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 C12orf54Q6X4T0 127 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 ZNF600Q6ZNG1 722 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 HSD17B11Q8NBQ5 300 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 OR1N2Q8NGR9 330 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 SCGB1C1Q8TD33 95 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 GINS3Q9BRX5 216 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 ZNF471Q9BX82 626 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-212ENST00000554486 NPCDR1Q9BY65 106 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 NOTCH3Q9UM47 2321 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 DNAH3Q8TD57 4116 aa4.78□□□□□ -1.64
SCFD1-212ENST00000554486 PKD1L1Q8TDX9 2849 aa4.78□□□□□ -1.65
SCFD1-212ENST00000554486 IGHV3OR16-8A0A075B7F1 116 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 WI2-2373I1.2A0A1W2PRP0 233 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 LINC01619G3V211 115 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 YIF1AO95070 293 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 RD3LP0DJH9 198 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 ATP6V0CP27449 155 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 RPL29P47914 159 aaKnown RBP4.77□□□□□ -1.65
SCFD1-212ENST00000554486 SELENOTP62341 195 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 RELQ04864 619 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-212ENST00000554486 RAB31Q13636 194 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 KLF5Q13887 457 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-212ENST00000554486 PAPPA-AS1Q5QFB9 102 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 UNQ9165/PRO28630Q6UXU0 137 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 SLC51BQ86UW2 128 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 GPHB5Q86YW7 130 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 C3orf56Q8N813 242 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 BPIFCQ8NFQ6 507 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 OR11H1Q8NG94 326 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 OR51G1Q8NGK1 321 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 STOML3Q8TAV4 291 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 ZNF479Q96JC4 524 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 SH3BGRL3Q9H299 93 aa4.77□□□□□ -1.65
SCFD1-212ENST00000554486 PUS1Q9Y606 427 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCFD1-212ENST00000554486 PRSS47A8MTI9 375 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 NDUFA4O00483 81 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 ZNF207O43670 478 aaKnown RBP4.76□□□□□ -1.65
SCFD1-212ENST00000554486 SCGB2A1O75556 95 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 CFDP00746 253 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-212ENST00000554486 FABP1P07148 127 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 SPP1P10451 314 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 TPT1P13693 172 aaKnown RBP4.76□□□□□ -1.65
SCFD1-212ENST00000554486 C4BPBP20851 252 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 ZP3P21754 424 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 MYCNOSP40205 109 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 SYNJ2BPP57105 145 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 PLP1P60201 277 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 B2MP61769 119 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 USF2Q15853 346 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-212ENST00000554486 RPEL1Q2QD12 228 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 FFAR4Q5NUL3 377 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 PATE2Q6UY27 113 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 PQLC2Q6ZP29 291 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 BAP18Q8IXM2 172 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 ZNF709Q8N972 641 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 Q8WTZ3 238 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 TMEM190Q8WZ59 177 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 DLX4Q92988 240 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms