RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 HYPMO75409 117 aa12.79□□□□□ -0.36
FOXN3-204ENST00000553840 LINC00869P0C866 280 aa12.79□□□□□ -0.36
FOXN3-204ENST00000553840 FXYD7P58549 80 aa12.79□□□□□ -0.36
FOXN3-204ENST00000553840 VAMP2P63027 116 aa12.79□□□□□ -0.36
FOXN3-204ENST00000553840 PSG9Q00887 426 aa12.79□□□□□ -0.36
FOXN3-204ENST00000553840 TEPPQ6URK8 271 aa12.79□□□□□ -0.36
FOXN3-204ENST00000553840 NEU1Q99519 415 aa12.79□□□□□ -0.36
FOXN3-204ENST00000553840 SLC25A39Q9BZJ4 359 aaPredicted RBP12.79□□□□□ -0.36
FOXN3-204ENST00000553840 DOK5Q9P104 306 aa12.79□□□□□ -0.36
FOXN3-204ENST00000553840 A0A0J9YX75 114 aa12.78□□□□□ -0.36
FOXN3-204ENST00000553840 TMEM189A5PLL7 270 aa12.78□□□□□ -0.36
FOXN3-204ENST00000553840 OR5G3P0C626 314 aa12.78□□□□□ -0.36
FOXN3-204ENST00000553840 RPL7P18124 248 aaKnown RBP12.78□□□□□ -0.36
FOXN3-204ENST00000553840 DEFB1P60022 68 aa12.78□□□□□ -0.36
FOXN3-204ENST00000553840 FAM78BQ5VT40 261 aa12.78□□□□□ -0.36
FOXN3-204ENST00000553840 ZNF705AQ6ZN79 300 aaPredicted RBP12.78□□□□□ -0.36
FOXN3-204ENST00000553840 ZNF431Q8TF32 576 aaPredicted RBP12.78□□□□□ -0.36
FOXN3-204ENST00000553840 GOLT1BQ9Y3E0 138 aa12.78□□□□□ -0.36
FOXN3-204ENST00000553840 IGHV3OR16-12A0A075B7B8 117 aa12.77□□□□□ -0.37
FOXN3-204ENST00000553840 FAM25EA8MYX2 175 aa12.77□□□□□ -0.37
FOXN3-204ENST00000553840 H3BRN7 92 aa12.77□□□□□ -0.37
FOXN3-204ENST00000553840 PLP1P60201 277 aa12.77□□□□□ -0.37
FOXN3-204ENST00000553840 FGL1Q08830 312 aa12.77□□□□□ -0.37
FOXN3-204ENST00000553840 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.77□□□□□ -0.37
FOXN3-204ENST00000553840 Q6ZTC4 211 aa12.77□□□□□ -0.37
FOXN3-204ENST00000553840 SHANK2-AS3Q9BTD1 123 aa12.77□□□□□ -0.37
FOXN3-204ENST00000553840 GGACTQ9BVM4 153 aa12.77□□□□□ -0.37
FOXN3-204ENST00000553840 SCRT1Q9BWW7 348 aa12.77□□□□□ -0.37
FOXN3-204ENST00000553840 RCL1Q9Y2P8 373 aaKnown RBP12.77□□□□□ -0.37
FOXN3-204ENST00000553840 ALMS1Q8TCU4 4167 aa12.77□□□□□ -0.37
FOXN3-204ENST00000553840 C7orf66A4D0T2 115 aa12.76□□□□□ -0.37
FOXN3-204ENST00000553840 C5orf51A6NDU8 294 aa12.76□□□□□ -0.37
FOXN3-204ENST00000553840 ZNF705FA8MVS1 300 aaPredicted RBP12.76□□□□□ -0.37
FOXN3-204ENST00000553840 F6UB75 175 aa12.76□□□□□ -0.37
FOXN3-204ENST00000553840 INMT-MINDY4F8WBC2 141 aa12.76□□□□□ -0.37
FOXN3-204ENST00000553840 GOSR2O14653 212 aa12.76□□□□□ -0.37
FOXN3-204ENST00000553840 CCNKO75909 580 aa12.76□□□□□ -0.37
FOXN3-204ENST00000553840 DUSP14O95147 198 aaKnown RBP12.76□□□□□ -0.37
FOXN3-204ENST00000553840 MBPP02686 304 aaPredicted RBP12.76□□□□□ -0.37
FOXN3-204ENST00000553840 ZNF705DP0CH99 300 aaPredicted RBP12.76□□□□□ -0.37
FOXN3-204ENST00000553840 ZNF705BP0CI00 300 aaPredicted RBP12.76□□□□□ -0.37
FOXN3-204ENST00000553840 PXDC1Q5TGL8 231 aa12.76□□□□□ -0.37
FOXN3-204ENST00000553840 C12orf45Q8N5I9 185 aaPredicted RBP12.76□□□□□ -0.37
FOXN3-204ENST00000553840 ZNF709Q8N972 641 aa12.76□□□□□ -0.37
FOXN3-204ENST00000553840 ARL6Q9H0F7 186 aa12.76□□□□□ -0.37
FOXN3-204ENST00000553840 SLC35B3Q9H1N7 401 aa12.76□□□□□ -0.37
FOXN3-204ENST00000553840 RFNGQ9Y644 331 aa12.76□□□□□ -0.37
FOXN3-204ENST00000553840 K7EPK0 472 aa12.75□□□□□ -0.37
FOXN3-204ENST00000553840 CCSO14618 274 aa12.75□□□□□ -0.37
FOXN3-204ENST00000553840 SPART-AS1P0CW21 52 aa12.75□□□□□ -0.37
FOXN3-204ENST00000553840 GSG1LQ6UXU4 331 aa12.75□□□□□ -0.37
FOXN3-204ENST00000553840 ZNF546Q86UE3 836 aa12.75□□□□□ -0.37
FOXN3-204ENST00000553840 C20orf173Q96LM9 149 aa12.75□□□□□ -0.37
FOXN3-204ENST00000553840 APLNQ9ULZ1 77 aa12.75□□□□□ -0.37
FOXN3-204ENST00000553840 CELA1Q9UNI1 258 aa12.75□□□□□ -0.37
FOXN3-204ENST00000553840 DEFB131BA0A096LNP1 70 aa12.74□□□□□ -0.37
FOXN3-204ENST00000553840 TEX48A0A1B0GUV7 120 aa12.74□□□□□ -0.37
FOXN3-204ENST00000553840 DEDDO75618 318 aa12.74□□□□□ -0.37
FOXN3-204ENST00000553840 AMBPP02760 352 aa12.74□□□□□ -0.37
FOXN3-204ENST00000553840 PVALBP20472 110 aaPredicted RBP12.74□□□□□ -0.37
FOXN3-204ENST00000553840 BCAP31P51572 246 aa12.74□□□□□ -0.37
FOXN3-204ENST00000553840 C12orf74Q32Q52 190 aa12.74□□□□□ -0.37
FOXN3-204ENST00000553840 RPP25LQ8N5L8 163 aaKnown RBP12.74□□□□□ -0.37
FOXN3-204ENST00000553840 LRRC20Q8TCA0 184 aa12.74□□□□□ -0.37
FOXN3-204ENST00000553840 RNF126Q9BV68 326 aa12.74□□□□□ -0.37
FOXN3-204ENST00000553840 GPN1Q9HCN4 374 aaPredicted RBP12.74□□□□□ -0.37
FOXN3-204ENST00000553840 LSM5Q9Y4Y9 91 aaKnown RBP12.74□□□□□ -0.37
FOXN3-204ENST00000553840 IGHV4-4A0A075B6R2 117 aa12.73□□□□□ -0.37
FOXN3-204ENST00000553840 HBE1P02100 147 aa12.73□□□□□ -0.37
FOXN3-204ENST00000553840 EMP1P54849 157 aa12.73□□□□□ -0.37
FOXN3-204ENST00000553840 SLC38A11Q08AI6 406 aa12.73□□□□□ -0.37
FOXN3-204ENST00000553840 RAB31Q13636 194 aa12.73□□□□□ -0.37
FOXN3-204ENST00000553840 UHRF2Q96PU4 802 aa12.73□□□□□ -0.37
FOXN3-204ENST00000553840 TMEM208Q9BTX3 173 aa12.73□□□□□ -0.37
FOXN3-204ENST00000553840 ARV1Q9H2C2 271 aa12.73□□□□□ -0.37
FOXN3-204ENST00000553840 AGPAT2O15120 278 aa12.72□□□□□ -0.37
FOXN3-204ENST00000553840 CAV2P51636 162 aa12.72□□□□□ -0.37
FOXN3-204ENST00000553840 ZNF767PQ75MW2 155 aa12.72□□□□□ -0.37
FOXN3-204ENST00000553840 ZNF738Q8NE65 137 aa12.72□□□□□ -0.37
FOXN3-204ENST00000553840 C2orf50Q96LR7 162 aa12.72□□□□□ -0.37
FOXN3-204ENST00000553840 C17orf77Q96MU5 243 aa12.72□□□□□ -0.37
FOXN3-204ENST00000553840 MARVELD1Q9BSK0 173 aa12.72□□□□□ -0.37
FOXN3-204ENST00000553840 HYDINQ4G0P3 5121 aa12.72□□□□□ -0.37
FOXN3-204ENST00000553840 PLECQ15149 4684 aaKnown RBP12.71□□□□□ -0.37
FOXN3-204ENST00000553840 A0A087X0K7 114 aa12.71□□□□□ -0.37
FOXN3-204ENST00000553840 TRAV8-2A0A0B4J237 113 aa12.71□□□□□ -0.37
FOXN3-204ENST00000553840 PRAF2O60831 178 aa12.71□□□□□ -0.37
FOXN3-204ENST00000553840 CNN1P51911 297 aaKnown RBP12.71□□□□□ -0.37
FOXN3-204ENST00000553840 RRN3P1Q2M238 152 aa12.71□□□□□ -0.37
FOXN3-204ENST00000553840 IGFL4Q6B9Z1 124 aa12.71□□□□□ -0.37
FOXN3-204ENST00000553840 RNF182Q8N6D2 247 aa12.71□□□□□ -0.37
FOXN3-204ENST00000553840 IGF2BP2-AS1Q96M15 143 aa12.71□□□□□ -0.37
FOXN3-204ENST00000553840 A8MTW9 85 aa12.7□□□□□ -0.38
FOXN3-204ENST00000553840 COX7A2P2O60397 106 aa12.7□□□□□ -0.38
FOXN3-204ENST00000553840 PTTG1O95997 202 aa12.7□□□□□ -0.38
FOXN3-204ENST00000553840 ARL16Q0P5N6 197 aa12.7□□□□□ -0.38
FOXN3-204ENST00000553840 PATE2Q6UY27 113 aa12.7□□□□□ -0.38
FOXN3-204ENST00000553840 Q6ZRG5 221 aa12.7□□□□□ -0.38
FOXN3-204ENST00000553840 LINC00305Q7Z4B0 112 aa12.7□□□□□ -0.38
FOXN3-204ENST00000553840 NDUFAF3Q9BU61 184 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms