RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 IFT20Q8IY31 132 aa1.66□□□□□ -2.14
LSM6P2-201ENST00000552208 C12orf29Q8N999 325 aa1.66□□□□□ -2.14
LSM6P2-201ENST00000552208 ZNF625Q96I27 306 aaPredicted RBP1.66□□□□□ -2.14
LSM6P2-201ENST00000552208 RETNLBQ9BQ08 111 aa1.66□□□□□ -2.14
LSM6P2-201ENST00000552208 C6orf62Q9GZU0 229 aaPredicted RBP1.66□□□□□ -2.14
LSM6P2-201ENST00000552208 NAT8BQ9UHF3 227 aa1.66□□□□□ -2.14
LSM6P2-201ENST00000552208 LAMTOR2Q9Y2Q5 125 aa1.66□□□□□ -2.14
LSM6P2-201ENST00000552208 FRMPD1Q5SYB0 1578 aa1.66□□□□□ -2.14
LSM6P2-201ENST00000552208 OBSL1O75147 1896 aa1.65□□□□□ -2.14
LSM6P2-201ENST00000552208 A0A087WX48 190 aa1.65□□□□□ -2.15
LSM6P2-201ENST00000552208 CST7O76096 145 aa1.65□□□□□ -2.15
LSM6P2-201ENST00000552208 PROSCO94903 275 aa1.65□□□□□ -2.15
LSM6P2-201ENST00000552208 SCGB1A1P11684 91 aa1.65□□□□□ -2.15
LSM6P2-201ENST00000552208 EIF3IQ13347 325 aaKnown RBP1.65□□□□□ -2.15
LSM6P2-201ENST00000552208 C10orf55Q5SWW7 151 aa1.65□□□□□ -2.15
LSM6P2-201ENST00000552208 CACYBPQ9HB71 228 aaKnown RBP1.65□□□□□ -2.15
LSM6P2-201ENST00000552208 DOCK4Q8N1I0 1966 aa1.65□□□□□ -2.15
LSM6P2-201ENST00000552208 BRWD1Q9NSI6 2320 aa1.65□□□□□ -2.15
LSM6P2-201ENST00000552208 RTL9Q8NET4 1388 aa1.64□□□□□ -2.15
LSM6P2-201ENST00000552208 COL5A3P25940 1745 aaPredicted RBP1.64□□□□□ -2.15
LSM6P2-201ENST00000552208 TRBV6-5A0A0K0K1A5 114 aa1.64□□□□□ -2.15
LSM6P2-201ENST00000552208 OVOL1O14753 267 aa1.64□□□□□ -2.15
LSM6P2-201ENST00000552208 RPL35P42766 123 aaKnown RBP1.64□□□□□ -2.15
LSM6P2-201ENST00000552208 RPS28P62857 69 aaKnown RBP1.64□□□□□ -2.15
LSM6P2-201ENST00000552208 Q8N2B8 174 aa1.64□□□□□ -2.15
LSM6P2-201ENST00000552208 TAF9BQ9HBM6 251 aa1.64□□□□□ -2.15
LSM6P2-201ENST00000552208 ARHGEF11O15085 1522 aa1.64□□□□□ -2.15
LSM6P2-201ENST00000552208 UBR2Q8IWV8 1755 aa1.64□□□□□ -2.15
LSM6P2-201ENST00000552208 MYH7BA7E2Y1 1941 aa1.64□□□□□ -2.15
LSM6P2-201ENST00000552208 RER1O15258 196 aa1.63□□□□□ -2.15
LSM6P2-201ENST00000552208 DHFRP00374 187 aa1.63□□□□□ -2.15
LSM6P2-201ENST00000552208 GPX1P07203 203 aa1.63□□□□□ -2.15
LSM6P2-201ENST00000552208 KRTAP12-3P60328 96 aa1.63□□□□□ -2.15
LSM6P2-201ENST00000552208 CROCCP2Q86T23 111 aa1.63□□□□□ -2.15
LSM6P2-201ENST00000552208 Q8N814 137 aa1.63□□□□□ -2.15
LSM6P2-201ENST00000552208 OR5D16Q8NGK9 328 aa1.63□□□□□ -2.15
LSM6P2-201ENST00000552208 SFT2D1Q8WV19 159 aa1.63□□□□□ -2.15
LSM6P2-201ENST00000552208 POP5Q969H6 163 aaKnown RBP1.63□□□□□ -2.15
LSM6P2-201ENST00000552208 BATF3Q9NR55 127 aa1.63□□□□□ -2.15
LSM6P2-201ENST00000552208 TRAPPC2LQ9UL33 140 aa1.63□□□□□ -2.15
LSM6P2-201ENST00000552208 CHCHD2Q9Y6H1 151 aaPredicted RBP1.63□□□□□ -2.15
LSM6P2-201ENST00000552208 FHAD1B1AJZ9 1412 aa1.63□□□□□ -2.15
LSM6P2-201ENST00000552208 RTTNQ86VV8 2226 aa1.63□□□□□ -2.15
LSM6P2-201ENST00000552208 IGKV2D-26A0A0A0MRZ7 120 aa1.62□□□□□ -2.15
LSM6P2-201ENST00000552208 IGHV1-58A0A0C4DH39 117 aa1.62□□□□□ -2.15
LSM6P2-201ENST00000552208 TRBV7-6A0A0J9YX20 115 aa1.62□□□□□ -2.15
LSM6P2-201ENST00000552208 A0A1B0GX51 115 aa1.62□□□□□ -2.15
LSM6P2-201ENST00000552208 KPNA4O00629 521 aaPredicted RBP1.62□□□□□ -2.15
LSM6P2-201ENST00000552208 IFNA4P05014 189 aa1.62□□□□□ -2.15
LSM6P2-201ENST00000552208 PSG9Q00887 426 aa1.62□□□□□ -2.15
LSM6P2-201ENST00000552208 KLRD1Q13241 179 aa1.62□□□□□ -2.15
LSM6P2-201ENST00000552208 TMEM35BQ8NCS4 154 aa1.62□□□□□ -2.15
LSM6P2-201ENST00000552208 CHCHD1Q96BP2 118 aaKnown RBP1.62□□□□□ -2.15
LSM6P2-201ENST00000552208 ZNF714Q96N38 554 aa1.62□□□□□ -2.15
LSM6P2-201ENST00000552208 OR5AC2Q9NZP5 309 aa1.62□□□□□ -2.15
LSM6P2-201ENST00000552208 JPT1Q9UK76 154 aa1.62□□□□□ -2.15
LSM6P2-201ENST00000552208 LY96Q9Y6Y9 160 aa1.62□□□□□ -2.15
LSM6P2-201ENST00000552208 DOCK10Q96BY6 2186 aa1.61□□□□□ -2.15
LSM6P2-201ENST00000552208 TRGV2A0A075B6R0 118 aa1.61□□□□□ -2.15
LSM6P2-201ENST00000552208 A0A087WSZ3 146 aa1.61□□□□□ -2.15
LSM6P2-201ENST00000552208 TRAV14DV4A0A0A6YYC5 116 aa1.61□□□□□ -2.15
LSM6P2-201ENST00000552208 J3KT08 172 aa1.61□□□□□ -2.15
LSM6P2-201ENST00000552208 OR10J4P0C629 311 aa1.61□□□□□ -2.15
LSM6P2-201ENST00000552208 BRS3P32247 399 aa1.61□□□□□ -2.15
LSM6P2-201ENST00000552208 DSCR4P56555 118 aaPredicted RBP1.61□□□□□ -2.15
LSM6P2-201ENST00000552208 C1orf137Q5JT78 98 aa1.61□□□□□ -2.15
LSM6P2-201ENST00000552208 C1orf134Q5TEV5 83 aa1.61□□□□□ -2.15
LSM6P2-201ENST00000552208 OR4K15Q8NH41 348 aa1.61□□□□□ -2.15
LSM6P2-201ENST00000552208 DIRC1Q969H9 104 aa1.61□□□□□ -2.15
LSM6P2-201ENST00000552208 TCEAL2Q9H3H9 227 aaPredicted RBP1.61□□□□□ -2.15
LSM6P2-201ENST00000552208 SPANXA1Q9NS26 97 aa1.61□□□□□ -2.15
LSM6P2-201ENST00000552208 PIK3C2AO00443 1686 aa1.61□□□□□ -2.15
LSM6P2-201ENST00000552208 TRAV36DV7A0A075B6V5 113 aa1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 ARL5CA6NH57 179 aa1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 E7EUB6 86 aa1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 C17orf112F2Z3M2 114 aa1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 ARPC5O15511 151 aa1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 MRPS14O60783 128 aaKnown RBP1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 SDC2P34741 201 aa1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 ZNF93P35789 620 aaPredicted RBP1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 RAB4BP61018 213 aa1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 OR8B8Q15620 311 aa1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 KRTAP26-1Q6PEX3 210 aa1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 RPS19BP1Q86WX3 136 aaKnown RBP1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 C15orf53Q8NAA6 179 aa1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 TMEM229BQ8NBD8 167 aa1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 OR2T35Q8NGX2 323 aa1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 ZNF563Q8TA94 476 aa1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 AIF1LQ9BQI0 150 aa1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 NUP98P52948 1817 aa1.6□□□□□ -2.15
LSM6P2-201ENST00000552208 ARHGEF10O15013 1369 aa1.59□□□□□ -2.15
LSM6P2-201ENST00000552208 NUP210LQ5VU65 1888 aa1.59□□□□□ -2.15
LSM6P2-201ENST00000552208 GBF1Q92538 1859 aa1.59□□□□□ -2.15
LSM6P2-201ENST00000552208 TCOF1Q13428 1488 aaKnown RBP1.59□□□□□ -2.15
LSM6P2-201ENST00000552208 LOC107984640A0A0U1RRK4 108 aa1.59□□□□□ -2.15
LSM6P2-201ENST00000552208 DEGS1O15121 323 aa1.59□□□□□ -2.15
LSM6P2-201ENST00000552208 FABP2P12104 132 aa1.59□□□□□ -2.15
LSM6P2-201ENST00000552208 RAB5CP51148 216 aa1.59□□□□□ -2.15
LSM6P2-201ENST00000552208 CNBPP62633 177 aaKnown RBP1.59□□□□□ -2.15
LSM6P2-201ENST00000552208 Q5XG85 94 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms