RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 CCDC32Q9BV29 185 aa14.37□□□□□ -0.11
GCN1-207ENST00000550471 SLC25A39Q9BZJ4 359 aaPredicted RBP14.37□□□□□ -0.11
GCN1-207ENST00000550471 C20orf85Q9H1P6 137 aa14.37□□□□□ -0.11
GCN1-207ENST00000550471 A8MTW9 85 aa14.36□□□□□ -0.11
GCN1-207ENST00000550471 H3BRN7 92 aa14.36□□□□□ -0.11
GCN1-207ENST00000550471 SCGB1D2O95969 90 aa14.36□□□□□ -0.11
GCN1-207ENST00000550471 LINC00869P0C866 280 aa14.36□□□□□ -0.11
GCN1-207ENST00000550471 GDF5OSQ5U4N7 250 aa14.36□□□□□ -0.11
GCN1-207ENST00000550471 FAM78BQ5VT40 261 aa14.36□□□□□ -0.11
GCN1-207ENST00000550471 ZNF546Q86UE3 836 aa14.36□□□□□ -0.11
GCN1-207ENST00000550471 GSKIPQ9P0R6 139 aa14.36□□□□□ -0.11
GCN1-207ENST00000550471 HYDINQ4G0P3 5121 aa14.35□□□□□ -0.11
GCN1-207ENST00000550471 DEFB131BA0A096LNP1 70 aa14.35□□□□□ -0.11
GCN1-207ENST00000550471 L7N2F9 121 aa14.35□□□□□ -0.11
GCN1-207ENST00000550471 HBE1P02100 147 aa14.35□□□□□ -0.11
GCN1-207ENST00000550471 VAMP2P63027 116 aa14.35□□□□□ -0.11
GCN1-207ENST00000550471 ZNF709Q8N972 641 aa14.35□□□□□ -0.11
GCN1-207ENST00000550471 IGHV4-4A0A075B6R2 117 aa14.34□□□□□ -0.11
GCN1-207ENST00000550471 DEDDO75618 318 aa14.34□□□□□ -0.11
GCN1-207ENST00000550471 IGKV3-20P01619 116 aa14.34□□□□□ -0.11
GCN1-207ENST00000550471 TCRBP04435 133 aa14.34□□□□□ -0.11
GCN1-207ENST00000550471 OR5G3P0C626 314 aa14.34□□□□□ -0.11
GCN1-207ENST00000550471 METTL15P1P0C7V9 234 aa14.34□□□□□ -0.11
GCN1-207ENST00000550471 CXCL2P19875 107 aa14.34□□□□□ -0.11
GCN1-207ENST00000550471 GATA2P23769 480 aaPredicted RBP14.34□□□□□ -0.11
GCN1-207ENST00000550471 RAB31Q13636 194 aa14.34□□□□□ -0.11
GCN1-207ENST00000550471 OXA1LQ15070 435 aa14.34□□□□□ -0.11
GCN1-207ENST00000550471 C12orf74Q32Q52 190 aa14.34□□□□□ -0.11
GCN1-207ENST00000550471 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.34□□□□□ -0.11
GCN1-207ENST00000550471 A0A087X0K7 114 aa14.33□□□□□ -0.12
GCN1-207ENST00000550471 GOSR2O14653 212 aa14.33□□□□□ -0.12
GCN1-207ENST00000550471 PVALBP20472 110 aaPredicted RBP14.33□□□□□ -0.12
GCN1-207ENST00000550471 TMEM182Q6ZP80 229 aaPredicted RBP14.33□□□□□ -0.12
GCN1-207ENST00000550471 IGF2BP2-AS1Q96M15 143 aa14.33□□□□□ -0.12
GCN1-207ENST00000550471 NDUFAF3Q9BU61 184 aa14.33□□□□□ -0.12
GCN1-207ENST00000550471 PLA2G10O15496 165 aa14.32□□□□□ -0.12
GCN1-207ENST00000550471 P0DMU3 169 aa14.32□□□□□ -0.12
GCN1-207ENST00000550471 FAM231AP0DMU4 169 aa14.32□□□□□ -0.12
GCN1-207ENST00000550471 FAM231CP0DMU5 169 aa14.32□□□□□ -0.12
GCN1-207ENST00000550471 RRAS2P62070 204 aaPredicted RBP14.32□□□□□ -0.12
GCN1-207ENST00000550471 RRN3P1Q2M238 152 aa14.32□□□□□ -0.12
GCN1-207ENST00000550471 RPP25LQ8N5L8 163 aaKnown RBP14.32□□□□□ -0.12
GCN1-207ENST00000550471 LRRC20Q8TCA0 184 aa14.32□□□□□ -0.12
GCN1-207ENST00000550471 ZNF431Q8TF32 576 aaPredicted RBP14.32□□□□□ -0.12
GCN1-207ENST00000550471 SCRT1Q9BWW7 348 aa14.32□□□□□ -0.12
GCN1-207ENST00000550471 RCL1Q9Y2P8 373 aaKnown RBP14.32□□□□□ -0.12
GCN1-207ENST00000550471 IGHV3OR16-12A0A075B7B8 117 aa14.31□□□□□ -0.12
GCN1-207ENST00000550471 C7orf66A4D0T2 115 aa14.31□□□□□ -0.12
GCN1-207ENST00000550471 MBPP02686 304 aaPredicted RBP14.31□□□□□ -0.12
GCN1-207ENST00000550471 MZT2BQ6NZ67 158 aa14.31□□□□□ -0.12
GCN1-207ENST00000550471 S100ZQ8WXG8 99 aa14.31□□□□□ -0.12
GCN1-207ENST00000550471 TMEM208Q9BTX3 173 aa14.31□□□□□ -0.12
GCN1-207ENST00000550471 ARL6Q9H0F7 186 aa14.31□□□□□ -0.12
GCN1-207ENST00000550471 SLC35B3Q9H1N7 401 aa14.31□□□□□ -0.12
GCN1-207ENST00000550471 ARV1Q9H2C2 271 aa14.31□□□□□ -0.12
GCN1-207ENST00000550471 CELA1Q9UNI1 258 aa14.31□□□□□ -0.12
GCN1-207ENST00000550471 INSP01308 110 aa14.3□□□□□ -0.12
GCN1-207ENST00000550471 FXYD7P58549 80 aa14.3□□□□□ -0.12
GCN1-207ENST00000550471 FGL1Q08830 312 aa14.3□□□□□ -0.12
GCN1-207ENST00000550471 C20orf173Q96LM9 149 aa14.3□□□□□ -0.12
GCN1-207ENST00000550471 NIPSNAP3BQ9BS92 247 aa14.3□□□□□ -0.12
GCN1-207ENST00000550471 BIRC6Q9NR09 4857 aa14.29□□□□□ -0.12
GCN1-207ENST00000550471 C5orf51A6NDU8 294 aa14.29□□□□□ -0.12
GCN1-207ENST00000550471 F6UB75 175 aa14.29□□□□□ -0.12
GCN1-207ENST00000550471 CNN1P51911 297 aaKnown RBP14.29□□□□□ -0.12
GCN1-207ENST00000550471 LCN15Q6UWW0 184 aa14.29□□□□□ -0.12
GCN1-207ENST00000550471 AMTNQ6UX39 209 aa14.29□□□□□ -0.12
GCN1-207ENST00000550471 Q6ZRG5 221 aa14.29□□□□□ -0.12
GCN1-207ENST00000550471 C12orf45Q8N5I9 185 aaPredicted RBP14.29□□□□□ -0.12
GCN1-207ENST00000550471 ZNF738Q8NE65 137 aa14.29□□□□□ -0.12
GCN1-207ENST00000550471 C2orf50Q96LR7 162 aa14.29□□□□□ -0.12
GCN1-207ENST00000550471 SLC50A1Q9BRV3 221 aa14.29□□□□□ -0.12
GCN1-207ENST00000550471 NUDT15Q9NV35 164 aa14.29□□□□□ -0.12
GCN1-207ENST00000550471 DKK2Q9UBU2 259 aa14.29□□□□□ -0.12
GCN1-207ENST00000550471 EPPK1P58107 5090 aaKnown RBP14.29□□□□□ -0.12
GCN1-207ENST00000550471 LOC102723971A0A1B0GUV8 181 aa14.28□□□□□ -0.12
GCN1-207ENST00000550471 AGPAT2O15120 278 aa14.28□□□□□ -0.12
GCN1-207ENST00000550471 DEFB1P60022 68 aa14.28□□□□□ -0.12
GCN1-207ENST00000550471 BPIFA4PQ86YQ2 179 aa14.28□□□□□ -0.12
GCN1-207ENST00000550471 C1orf158Q8N1D5 194 aa14.28□□□□□ -0.12
GCN1-207ENST00000550471 TMEM256Q8N2U0 113 aa14.28□□□□□ -0.12
GCN1-207ENST00000550471 OR11H7Q8NGC8 314 aa14.28□□□□□ -0.12
GCN1-207ENST00000550471 C17orf77Q96MU5 243 aa14.28□□□□□ -0.12
GCN1-207ENST00000550471 PPP1R14DQ9NXH3 145 aa14.28□□□□□ -0.12
GCN1-207ENST00000550471 TRAV8-2A0A0B4J237 113 aa14.27□□□□□ -0.13
GCN1-207ENST00000550471 FAM240BA0A1B0GVZ2 78 aa14.27□□□□□ -0.13
GCN1-207ENST00000550471 FAM25EA8MYX2 175 aa14.27□□□□□ -0.13
GCN1-207ENST00000550471 H2AFB2P0C5Z0 115 aa14.27□□□□□ -0.13
GCN1-207ENST00000550471 CXCL3P19876 107 aa14.27□□□□□ -0.13
GCN1-207ENST00000550471 TSPOP30536 169 aa14.27□□□□□ -0.13
GCN1-207ENST00000550471 BCAP31P51572 246 aa14.27□□□□□ -0.13
GCN1-207ENST00000550471 EMP1P54849 157 aa14.27□□□□□ -0.13
GCN1-207ENST00000550471 SLC38A11Q08AI6 406 aa14.27□□□□□ -0.13
GCN1-207ENST00000550471 PSG3Q16557 428 aa14.27□□□□□ -0.13
GCN1-207ENST00000550471 GSG1LQ6UXU4 331 aa14.27□□□□□ -0.13
GCN1-207ENST00000550471 TRAV6A0A075B6T7 132 aa14.26□□□□□ -0.13
GCN1-207ENST00000550471 COX7A2P2O60397 106 aa14.26□□□□□ -0.13
GCN1-207ENST00000550471 CCNKO75909 580 aa14.26□□□□□ -0.13
GCN1-207ENST00000550471 S100A11P31949 105 aa14.26□□□□□ -0.13
GCN1-207ENST00000550471 CAV2P51636 162 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 282.3 ms