RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 C1orf158Q8N1D5 194 aa10.28□□□□□ -0.76
COL2A1-209ENST00000546974 SMIM8Q96KF7 97 aa10.28□□□□□ -0.76
COL2A1-209ENST00000546974 DKK2Q9UBU2 259 aa10.28□□□□□ -0.76
COL2A1-209ENST00000546974 FLVCR2Q9UPI3 526 aa10.28□□□□□ -0.76
COL2A1-209ENST00000546974 SMCO3A2RU48 225 aa10.27□□□□□ -0.77
COL2A1-209ENST00000546974 CENPXA8MT69 81 aa10.27□□□□□ -0.77
COL2A1-209ENST00000546974 H3BRN7 92 aa10.27□□□□□ -0.77
COL2A1-209ENST00000546974 HBE1P02100 147 aa10.27□□□□□ -0.77
COL2A1-209ENST00000546974 IL5P05113 134 aa10.27□□□□□ -0.77
COL2A1-209ENST00000546974 P0DMU3 169 aa10.27□□□□□ -0.77
COL2A1-209ENST00000546974 FAM231AP0DMU4 169 aa10.27□□□□□ -0.77
COL2A1-209ENST00000546974 FAM231CP0DMU5 169 aa10.27□□□□□ -0.77
COL2A1-209ENST00000546974 SELENOTP62341 195 aa10.27□□□□□ -0.77
COL2A1-209ENST00000546974 C7orf50Q9BRJ6 194 aaKnown RBP10.27□□□□□ -0.77
COL2A1-209ENST00000546974 SLC25A39Q9BZJ4 359 aaPredicted RBP10.27□□□□□ -0.77
COL2A1-209ENST00000546974 SSSCA1O60232 199 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 PLP1P60201 277 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 RAP2BP61225 183 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 DLK1P80370 383 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 FAM222AQ5U5X8 452 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 AMTNQ6UX39 209 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 TMEM14EPQ6UXP3 125 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 POM121L12Q8N7R1 296 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 FAM210BQ96KR6 192 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 IGF2BP2-AS1Q96M15 143 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 SDHCQ99643 169 aaPredicted RBP10.26□□□□□ -0.77
COL2A1-209ENST00000546974 NIPSNAP3BQ9BS92 247 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 SHANK2-AS3Q9BTD1 123 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 SCRT1Q9BWW7 348 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 NPVFQ9HCQ7 196 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 NDUFA13Q9P0J0 144 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 HIGD1AQ9Y241 93 aa10.26□□□□□ -0.77
COL2A1-209ENST00000546974 TRAV8-2A0A0B4J237 113 aa10.25□□□□□ -0.77
COL2A1-209ENST00000546974 LOC102723971A0A1B0GUV8 181 aa10.25□□□□□ -0.77
COL2A1-209ENST00000546974 LINC00854A0A1B0GVQ3 168 aa10.25□□□□□ -0.77
COL2A1-209ENST00000546974 FNDC10F2Z333 226 aa10.25□□□□□ -0.77
COL2A1-209ENST00000546974 HYPMO75409 117 aa10.25□□□□□ -0.77
COL2A1-209ENST00000546974 DUSP14O95147 198 aaKnown RBP10.25□□□□□ -0.77
COL2A1-209ENST00000546974 ANXA7P20073 488 aaKnown RBP10.25□□□□□ -0.77
COL2A1-209ENST00000546974 BTCP35070 178 aa10.25□□□□□ -0.77
COL2A1-209ENST00000546974 OXA1LQ15070 435 aa10.25□□□□□ -0.77
COL2A1-209ENST00000546974 RRN3P1Q2M238 152 aa10.25□□□□□ -0.77
COL2A1-209ENST00000546974 CNPY1Q3B7I2 92 aa10.25□□□□□ -0.77
COL2A1-209ENST00000546974 C4orf46Q504U0 113 aa10.25□□□□□ -0.77
COL2A1-209ENST00000546974 S100A7AQ86SG5 101 aa10.25□□□□□ -0.77
COL2A1-209ENST00000546974 DYNC1H1Q14204 4646 aaKnown RBP10.25□□□□□ -0.77
COL2A1-209ENST00000546974 PKD1P98161 4303 aa10.24□□□□□ -0.77
COL2A1-209ENST00000546974 CCNKO75909 580 aa10.24□□□□□ -0.77
COL2A1-209ENST00000546974 METTL15P1P0C7V9 234 aa10.24□□□□□ -0.77
COL2A1-209ENST00000546974 LINC00869P0C866 280 aa10.24□□□□□ -0.77
COL2A1-209ENST00000546974 RPL7P18124 248 aaKnown RBP10.24□□□□□ -0.77
COL2A1-209ENST00000546974 CNN1P51911 297 aaKnown RBP10.24□□□□□ -0.77
COL2A1-209ENST00000546974 TAS2R30P59541 319 aa10.24□□□□□ -0.77
COL2A1-209ENST00000546974 FGL1Q08830 312 aa10.24□□□□□ -0.77
COL2A1-209ENST00000546974 IAH1Q2TAA2 248 aaPredicted RBP10.24□□□□□ -0.77
COL2A1-209ENST00000546974 IGFL4Q6B9Z1 124 aa10.24□□□□□ -0.77
COL2A1-209ENST00000546974 OR11H7Q8NGC8 314 aa10.24□□□□□ -0.77
COL2A1-209ENST00000546974 OR10P1Q8NGE3 313 aa10.24□□□□□ -0.77
COL2A1-209ENST00000546974 MITD1Q8WV92 249 aa10.24□□□□□ -0.77
COL2A1-209ENST00000546974 A0A087X0K7 114 aa10.23□□□□□ -0.77
COL2A1-209ENST00000546974 K7EPK0 472 aa10.23□□□□□ -0.77
COL2A1-209ENST00000546974 TSC22D2O75157 780 aa10.23□□□□□ -0.77
COL2A1-209ENST00000546974 OR5G3P0C626 314 aa10.23□□□□□ -0.77
COL2A1-209ENST00000546974 IL7P13232 177 aa10.23□□□□□ -0.77
COL2A1-209ENST00000546974 RRAS2P62070 204 aaPredicted RBP10.23□□□□□ -0.77
COL2A1-209ENST00000546974 TEPPQ6URK8 271 aa10.23□□□□□ -0.77
COL2A1-209ENST00000546974 LINC00336Q6ZUF6 198 aa10.23□□□□□ -0.77
COL2A1-209ENST00000546974 ZBTB8BQ8NAP8 495 aaPredicted RBP10.23□□□□□ -0.77
COL2A1-209ENST00000546974 TMEM208Q9BTX3 173 aa10.23□□□□□ -0.77
COL2A1-209ENST00000546974 BATF3Q9NR55 127 aa10.23□□□□□ -0.77
COL2A1-209ENST00000546974 PLA2G2EQ9NZK7 142 aa10.23□□□□□ -0.77
COL2A1-209ENST00000546974 MGAT4CQ9UBM8 478 aa10.23□□□□□ -0.77
COL2A1-209ENST00000546974 RNF24Q9Y225 148 aa10.23□□□□□ -0.77
COL2A1-209ENST00000546974 YTHDF2Q9Y5A9 579 aaKnown RBP10.23□□□□□ -0.77
COL2A1-209ENST00000546974 CRXO43186 299 aaPredicted RBP10.22□□□□□ -0.77
COL2A1-209ENST00000546974 SCGB1D2O95969 90 aa10.22□□□□□ -0.77
COL2A1-209ENST00000546974 B2MP61769 119 aa10.22□□□□□ -0.77
COL2A1-209ENST00000546974 SPINK13Q1W4C9 94 aa10.22□□□□□ -0.77
COL2A1-209ENST00000546974 PXDC1Q5TGL8 231 aa10.22□□□□□ -0.77
COL2A1-209ENST00000546974 RNF182Q8N6D2 247 aa10.22□□□□□ -0.77
COL2A1-209ENST00000546974 GGACTQ9BVM4 153 aa10.22□□□□□ -0.77
COL2A1-209ENST00000546974 ARL6Q9H0F7 186 aa10.22□□□□□ -0.77
COL2A1-209ENST00000546974 GSKIPQ9P0R6 139 aa10.22□□□□□ -0.77
COL2A1-209ENST00000546974 RCL1Q9Y2P8 373 aaKnown RBP10.22□□□□□ -0.77
COL2A1-209ENST00000546974 DNAH11Q96DT5 4516 aa10.21□□□□□ -0.77
COL2A1-209ENST00000546974 M0R2Z0 102 aa10.21□□□□□ -0.77
COL2A1-209ENST00000546974 INSP01308 110 aa10.21□□□□□ -0.77
COL2A1-209ENST00000546974 PATE2Q6UY27 113 aa10.21□□□□□ -0.77
COL2A1-209ENST00000546974 ZNF738Q8NE65 137 aa10.21□□□□□ -0.77
COL2A1-209ENST00000546974 UHRF2Q96PU4 802 aa10.21□□□□□ -0.77
COL2A1-209ENST00000546974 ARV1Q9H2C2 271 aa10.21□□□□□ -0.77
COL2A1-209ENST00000546974 KIAA1109Q2LD37 5005 aa10.21□□□□□ -0.78
COL2A1-209ENST00000546974 C7orf66A4D0T2 115 aa10.2□□□□□ -0.78
COL2A1-209ENST00000546974 MRPS12O15235 138 aaKnown RBP10.2□□□□□ -0.78
COL2A1-209ENST00000546974 MBPP02686 304 aaPredicted RBP10.2□□□□□ -0.78
COL2A1-209ENST00000546974 HTN3P15516 51 aa10.2□□□□□ -0.78
COL2A1-209ENST00000546974 CXCL3P19876 107 aa10.2□□□□□ -0.78
COL2A1-209ENST00000546974 DAD1P61803 113 aa10.2□□□□□ -0.78
COL2A1-209ENST00000546974 SLC38A11Q08AI6 406 aa10.2□□□□□ -0.78
COL2A1-209ENST00000546974 PSG3Q16557 428 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms