RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 TMEM37Q8WXS4 190 aa8.83□□□□□ -1
SNHG1-221ENST00000544983 MRPL32Q9BYC8 188 aaKnown RBP8.83□□□□□ -1
SNHG1-221ENST00000544983 NRN1Q9NPD7 142 aa8.83□□□□□ -1
SNHG1-221ENST00000544983 CMYA5Q8N3K9 4069 aa8.83□□□□□ -1
SNHG1-221ENST00000544983 IGHV3-66A0A0C4DH42 116 aa8.82□□□□□ -1
SNHG1-221ENST00000544983 BCL2L11O43521 198 aa8.82□□□□□ -1
SNHG1-221ENST00000544983 PFDN1O60925 122 aa8.82□□□□□ -1
SNHG1-221ENST00000544983 M6PRP20645 277 aa8.82□□□□□ -1
SNHG1-221ENST00000544983 BPIFA4PQ86YQ2 179 aa8.82□□□□□ -1
SNHG1-221ENST00000544983 HSD17B11Q8NBQ5 300 aa8.82□□□□□ -1
SNHG1-221ENST00000544983 STXBP6Q8NFX7 210 aa8.82□□□□□ -1
SNHG1-221ENST00000544983 UHRF2Q96PU4 802 aa8.82□□□□□ -1
SNHG1-221ENST00000544983 MS4A6AQ9H2W1 248 aa8.82□□□□□ -1
SNHG1-221ENST00000544983 SLC25A22Q9H936 323 aa8.82□□□□□ -1
SNHG1-221ENST00000544983 CXCL2P19875 107 aa8.81□□□□□ -1
SNHG1-221ENST00000544983 ATP6V0CP27449 155 aa8.81□□□□□ -1
SNHG1-221ENST00000544983 RHOBP62745 196 aa8.81□□□□□ -1
SNHG1-221ENST00000544983 FAM78BQ5VT40 261 aa8.81□□□□□ -1
SNHG1-221ENST00000544983 TMUB2Q71RG4 321 aa8.81□□□□□ -1
SNHG1-221ENST00000544983 SCRT1Q9BWW7 348 aa8.81□□□□□ -1
SNHG1-221ENST00000544983 CYTL1Q9NRR1 136 aa8.81□□□□□ -1
SNHG1-221ENST00000544983 K7EQG2 157 aa8.8□□□□□ -1
SNHG1-221ENST00000544983 ATF4P18848 351 aaPredicted RBP8.8□□□□□ -1
SNHG1-221ENST00000544983 ID1P41134 155 aa8.8□□□□□ -1
SNHG1-221ENST00000544983 TAS2R45P59539 299 aa8.8□□□□□ -1
SNHG1-221ENST00000544983 SNRPD3P62318 126 aaKnown RBP8.8□□□□□ -1
SNHG1-221ENST00000544983 GUK1Q16774 197 aa8.8□□□□□ -1
SNHG1-221ENST00000544983 LGALSLQ3ZCW2 172 aaPredicted RBP8.8□□□□□ -1
SNHG1-221ENST00000544983 EIF5AL1Q6IS14 154 aaKnown RBP8.8□□□□□ -1
SNHG1-221ENST00000544983 DCANP1Q8TF63 244 aa8.8□□□□□ -1
SNHG1-221ENST00000544983 ZNF471Q9BX82 626 aaPredicted RBP8.8□□□□□ -1
SNHG1-221ENST00000544983 SLC25A32Q9H2D1 315 aa8.8□□□□□ -1
SNHG1-221ENST00000544983 AURKAIP1Q9NWT8 199 aaPredicted RBP8.8□□□□□ -1
SNHG1-221ENST00000544983 TMEM14CQ9P0S9 112 aa8.8□□□□□ -1
SNHG1-221ENST00000544983 FUT9Q9Y231 359 aa8.8□□□□□ -1
SNHG1-221ENST00000544983 A0A087X0K7 114 aa8.79□□□□□ -1
SNHG1-221ENST00000544983 A0A1W2PPV4 95 aa8.79□□□□□ -1
SNHG1-221ENST00000544983 ISLRO14498 428 aa8.79□□□□□ -1
SNHG1-221ENST00000544983 SEC11BP0C7V7 166 aa8.79□□□□□ -1
SNHG1-221ENST00000544983 SPP1P10451 314 aa8.79□□□□□ -1
SNHG1-221ENST00000544983 TPT1P13693 172 aaKnown RBP8.79□□□□□ -1
SNHG1-221ENST00000544983 CD81P60033 236 aa8.79□□□□□ -1
SNHG1-221ENST00000544983 LEMD1Q68G75 181 aa8.79□□□□□ -1
SNHG1-221ENST00000544983 BAP18Q8IXM2 172 aa8.79□□□□□ -1
SNHG1-221ENST00000544983 GBGT1Q8N5D6 347 aa8.79□□□□□ -1
SNHG1-221ENST00000544983 STOML3Q8TAV4 291 aa8.79□□□□□ -1
SNHG1-221ENST00000544983 PRR25Q96S07 402 aa8.79□□□□□ -1
SNHG1-221ENST00000544983 HRH4Q9H3N8 390 aa8.79□□□□□ -1
SNHG1-221ENST00000544983 CLEC5AQ9NY25 188 aa8.79□□□□□ -1
SNHG1-221ENST00000544983 SMAD5-AS1Q9Y6J3 95 aa8.79□□□□□ -1
SNHG1-221ENST00000544983 IGKV3-7A0A075B6H7 116 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 A8MZ25 164 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 OR11H12B2RN74 326 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 UMAD1C9J7I0 102 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 ZNF253O75346 499 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 PSMB3P49720 205 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 DEFA6Q01524 100 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 CD300CQ08708 224 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 KHDC3LQ587J8 217 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 TMEM41BQ5BJD5 291 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 GCSAMLQ5JQS6 135 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 LCN15Q6UWW0 184 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 SLC51BQ86UW2 128 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 Q8N1Y9 231 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 OR10G4Q8NGN3 311 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 OR10G9Q8NGN4 311 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 OR10G7Q8NGN6 311 aa8.78□□□□□ -1
SNHG1-221ENST00000544983 MRPS12O15235 138 aaKnown RBP8.77□□□□□ -1.01
SNHG1-221ENST00000544983 CD7P09564 240 aa8.77□□□□□ -1.01
SNHG1-221ENST00000544983 TFPI2P48307 235 aa8.77□□□□□ -1.01
SNHG1-221ENST00000544983 PDE6HQ13956 83 aa8.77□□□□□ -1.01
SNHG1-221ENST00000544983 AKR1C8PQ5T2L2 129 aa8.77□□□□□ -1.01
SNHG1-221ENST00000544983 PQLC2Q6ZP29 291 aa8.77□□□□□ -1.01
SNHG1-221ENST00000544983 WFDC3Q8IUB2 231 aa8.77□□□□□ -1.01
SNHG1-221ENST00000544983 C9orf62Q8N4C0 152 aa8.77□□□□□ -1.01
SNHG1-221ENST00000544983 SLC50A1Q9BRV3 221 aa8.77□□□□□ -1.01
SNHG1-221ENST00000544983 ACTR3CQ9C0K3 210 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-221ENST00000544983 SH3BGRL3Q9H299 93 aa8.77□□□□□ -1.01
SNHG1-221ENST00000544983 SELENOKQ9Y6D0 94 aa8.77□□□□□ -1.01
SNHG1-221ENST00000544983 K7EIL1 84 aa8.76□□□□□ -1.01
SNHG1-221ENST00000544983 IGLC2P0DOY2 106 aa8.76□□□□□ -1.01
SNHG1-221ENST00000544983 HIST1H1EP10412 219 aaKnown RBP8.76□□□□□ -1.01
SNHG1-221ENST00000544983 ODF3L2Q3SX64 289 aa8.76□□□□□ -1.01
SNHG1-221ENST00000544983 MORN5Q5VZ52 161 aa8.76□□□□□ -1.01
SNHG1-221ENST00000544983 SPATA31B1PQ5VZV4 182 aa8.76□□□□□ -1.01
SNHG1-221ENST00000544983 DPPA3Q6W0C5 159 aa8.76□□□□□ -1.01
SNHG1-221ENST00000544983 RPP25LQ8N5L8 163 aaKnown RBP8.76□□□□□ -1.01
SNHG1-221ENST00000544983 LRRC20Q8TCA0 184 aa8.76□□□□□ -1.01
SNHG1-221ENST00000544983 FAM167A-AS1Q96KT0 104 aa8.76□□□□□ -1.01
SNHG1-221ENST00000544983 C16orf92Q96LL3 132 aa8.76□□□□□ -1.01
SNHG1-221ENST00000544983 OR51M1Q9H341 326 aa8.76□□□□□ -1.01
SNHG1-221ENST00000544983 TUBA4BQ9H853 241 aa8.76□□□□□ -1.01
SNHG1-221ENST00000544983 C19orf73Q9NVV2 129 aa8.76□□□□□ -1.01
SNHG1-221ENST00000544983 NBEAL2Q6ZNJ1 2754 aa8.76□□□□□ -1.01
SNHG1-221ENST00000544983 SOCS3O14543 225 aa8.75□□□□□ -1.01
SNHG1-221ENST00000544983 CDC34P49427 236 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-221ENST00000544983 RAB5CP51148 216 aa8.75□□□□□ -1.01
SNHG1-221ENST00000544983 RAB2AP61019 212 aa8.75□□□□□ -1.01
SNHG1-221ENST00000544983 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.75□□□□□ -1.01
SNHG1-221ENST00000544983 MIR17HGQ75NE6 70 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms